Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0996
         (641 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    23   3.3  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   7.7  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   7.7  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 412 LKFYDKITPVTIYYQNILD 356
           +KF DK+ P  + +Q+ LD
Sbjct: 267 IKFGDKVGPACLPFQHFLD 285


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +3

Query: 570 VFSSYMNRVNIPSN 611
           + S+ +NR+NIP+N
Sbjct: 51  IISAAVNRLNIPAN 64


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +3

Query: 570 VFSSYMNRVNIPSN 611
           + S+ +NR+NIP+N
Sbjct: 51  IISAAVNRLNIPAN 64


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,199
Number of Sequences: 438
Number of extensions: 4025
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19315974
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)