Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0995
(574 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g32160.1 68414.m03956 expressed protein 32 0.24
At1g21610.2 68414.m02703 wound-responsive family protein similar... 30 0.95
At1g21610.1 68414.m02702 wound-responsive family protein similar... 30 0.95
At5g29020.1 68418.m03592 hypothetical protein 29 1.7
At3g01770.1 68416.m00116 DNA-binding bromodomain-containing prot... 29 2.2
At2g41160.1 68415.m05084 ubiquitin-associated (UBA)/TS-N domain-... 28 3.8
At1g14730.1 68414.m01761 cytochrome B561 family similar to cytoc... 28 3.8
At4g21160.4 68417.m03061 zinc finger and C2 domain protein (ZAC)... 27 6.7
At4g21160.3 68417.m03060 zinc finger and C2 domain protein (ZAC)... 27 6.7
At4g21160.2 68417.m03059 zinc finger and C2 domain protein (ZAC)... 27 6.7
At4g21160.1 68417.m03058 zinc finger and C2 domain protein (ZAC)... 27 6.7
At1g66230.1 68414.m07517 myb family transcription factor (MYB20)... 27 6.7
At1g08050.1 68414.m00879 zinc finger (C3HC4-type RING finger) fa... 27 6.7
At3g13150.1 68416.m01645 pentatricopeptide (PPR) repeat-containi... 27 8.9
>At1g32160.1 68414.m03956 expressed protein
Length = 406
Score = 32.3 bits (70), Expect = 0.24
Identities = 23/56 (41%), Positives = 29/56 (51%)
Frame = -2
Query: 207 RLRFNEKALSSFSKFVTPSLSSSKIVPRLNSSSIAKKKDMDKAFPNE*GRLTFFTV 40
RL FN SFSKF++PS S S + R +S I K + + NE GR TV
Sbjct: 11 RLCFNHYLSDSFSKFLSPSSSPSLLPQRCHSFCIPK---LGSSSTNENGRGRSVTV 63
>At1g21610.2 68414.m02703 wound-responsive family protein similar to
wound-responsive protein 14.05 (GI:16506638) [Castanea
sativa]; ESTs gb T42839 and gb|AA395192 come from this
gene
Length = 683
Score = 30.3 bits (65), Expect = 0.95
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +2
Query: 176 LLNAFSLKRNLRKVFDLSDAATRVKGVDAFRGIN 277
L+ SLKRNL+ + D+ D+ATR K F+ IN
Sbjct: 408 LIQLRSLKRNLKIMIDMGDSATREKDT-RFKQIN 440
>At1g21610.1 68414.m02702 wound-responsive family protein similar to
wound-responsive protein 14.05 (GI:16506638) [Castanea
sativa]; ESTs gb T42839 and gb|AA395192 come from this
gene
Length = 684
Score = 30.3 bits (65), Expect = 0.95
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +2
Query: 176 LLNAFSLKRNLRKVFDLSDAATRVKGVDAFRGIN 277
L+ SLKRNL+ + D+ D+ATR K F+ IN
Sbjct: 409 LIQLRSLKRNLKIMIDMGDSATREKDT-RFKQIN 441
>At5g29020.1 68418.m03592 hypothetical protein
Length = 847
Score = 29.5 bits (63), Expect = 1.7
Identities = 22/80 (27%), Positives = 36/80 (45%)
Frame = +2
Query: 284 ALLVAHKSMAMAHNPYVNKVSFSEVFGMPWAVIGRSAILYTDSFLYLSGFLNAYNLLQEL 463
A+ VA ++M M K E G+ + + R A D F+YLS L++ L
Sbjct: 706 AIRVAERNMKMDSEVVRCKRLLVEAKGLKDSEVARDA---NDQFMYLSQAGANAQLIKAL 762
Query: 464 ERKGTIDLKSRLINRWFRLF 523
E G++ + + + W R F
Sbjct: 763 EDGGSLATEKKQVEDWLRDF 782
>At3g01770.1 68416.m00116 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 620
Score = 29.1 bits (62), Expect = 2.2
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = -2
Query: 252 PLTLVAASDRSNTFLRLRFNEKALSSFSKFVTPSLSSSKIVPRLNSSSIAKKK 94
PL+ +++S+R LR + L SF K V L SKIV +S++++ K
Sbjct: 44 PLSDLSSSERRKWIHTLRQELEQLRSFQKSVGDLLPISKIVTSTPASNVSRPK 96
>At2g41160.1 68415.m05084 ubiquitin-associated (UBA)/TS-N
domain-containing protein contains Pfam profile PF00627:
UBA/TS-N domain
Length = 287
Score = 28.3 bits (60), Expect = 3.8
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -2
Query: 207 RLRFNEKALSSFSKFVTPSLSSSKIVPRLNSSSIAKK 97
+ +F E S FS+F PSLSS PR S ++ ++
Sbjct: 194 KAKFPEFMASLFSRFSLPSLSSHSQPPRRTSPNLGRQ 230
>At1g14730.1 68414.m01761 cytochrome B561 family similar to
cytochrome GB:AAD11424 GI:4206110 [Mesembryanthemum
crystallinum]; contains Pfam domain, PF03188: Cytochrome
b561
Length = 152
Score = 28.3 bits (60), Expect = 3.8
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +2
Query: 365 MPWAVIGRSAILYTDSFLYLSGFLNAYNLLQELERKGTIDLKSRLIN 505
MPW V+G A+LY L+G + +L + + + +SRLIN
Sbjct: 88 MPWHVLGGRALLYMGIVAALTGLMQRATMLGQ-----STNAESRLIN 129
>At4g21160.4 68417.m03061 zinc finger and C2 domain protein (ZAC)
identical to zinc finger and C2 domain protein
GI:9957238 from [Arabidopsis thaliana]
Length = 337
Score = 27.5 bits (58), Expect = 6.7
Identities = 21/67 (31%), Positives = 31/67 (46%)
Frame = -2
Query: 297 ATSKARALIPLNASTPLTLVAASDRSNTFLRLRFNEKALSSFSKFVTPSLSSSKIVPRLN 118
A S A IP +S P A+ D+ F+R ++ + S +T SS P
Sbjct: 92 ANSIYEAFIPEGSSKPGP-DASHDQRMRFIRSKYEHQEFLKPSLRITSVRGSSTKTPAFL 150
Query: 117 SSSIAKK 97
SSS++KK
Sbjct: 151 SSSLSKK 157
>At4g21160.3 68417.m03060 zinc finger and C2 domain protein (ZAC)
identical to zinc finger and C2 domain protein
GI:9957238 from [Arabidopsis thaliana]
Length = 337
Score = 27.5 bits (58), Expect = 6.7
Identities = 21/67 (31%), Positives = 31/67 (46%)
Frame = -2
Query: 297 ATSKARALIPLNASTPLTLVAASDRSNTFLRLRFNEKALSSFSKFVTPSLSSSKIVPRLN 118
A S A IP +S P A+ D+ F+R ++ + S +T SS P
Sbjct: 92 ANSIYEAFIPEGSSKPGP-DASHDQRMRFIRSKYEHQEFLKPSLRITSVRGSSTKTPAFL 150
Query: 117 SSSIAKK 97
SSS++KK
Sbjct: 151 SSSLSKK 157
>At4g21160.2 68417.m03059 zinc finger and C2 domain protein (ZAC)
identical to zinc finger and C2 domain protein
GI:9957238 from [Arabidopsis thaliana]
Length = 337
Score = 27.5 bits (58), Expect = 6.7
Identities = 21/67 (31%), Positives = 31/67 (46%)
Frame = -2
Query: 297 ATSKARALIPLNASTPLTLVAASDRSNTFLRLRFNEKALSSFSKFVTPSLSSSKIVPRLN 118
A S A IP +S P A+ D+ F+R ++ + S +T SS P
Sbjct: 92 ANSIYEAFIPEGSSKPGP-DASHDQRMRFIRSKYEHQEFLKPSLRITSVRGSSTKTPAFL 150
Query: 117 SSSIAKK 97
SSS++KK
Sbjct: 151 SSSLSKK 157
>At4g21160.1 68417.m03058 zinc finger and C2 domain protein (ZAC)
identical to zinc finger and C2 domain protein
GI:9957238 from [Arabidopsis thaliana]
Length = 337
Score = 27.5 bits (58), Expect = 6.7
Identities = 21/67 (31%), Positives = 31/67 (46%)
Frame = -2
Query: 297 ATSKARALIPLNASTPLTLVAASDRSNTFLRLRFNEKALSSFSKFVTPSLSSSKIVPRLN 118
A S A IP +S P A+ D+ F+R ++ + S +T SS P
Sbjct: 92 ANSIYEAFIPEGSSKPGP-DASHDQRMRFIRSKYEHQEFLKPSLRITSVRGSSTKTPAFL 150
Query: 117 SSSIAKK 97
SSS++KK
Sbjct: 151 SSSLSKK 157
>At1g66230.1 68414.m07517 myb family transcription factor (MYB20)
similar to myb-related transcription factor GI:1430846
from [Lycopersicon esculentum]; contains PFAM profile:
Myb DNA binding domain PF00249
Length = 282
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 449 LLQELERKGTIDLKSRLINRWFRL 520
LL + E K IDL S+L NRW ++
Sbjct: 69 LLSDYEEKMVIDLHSQLGNRWSKI 92
>At1g08050.1 68414.m00879 zinc finger (C3HC4-type RING finger)
family protein low similarity to SP|P79263
Inter-alpha-trypsin inhibitor heavy chain H4 precursor
{Sus scrofa}; contains Pfam profiles PF00097: Zinc
finger, C3HC4 type (RING finger), PF00092: von
Willebrand factor type A domain
Length = 641
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -1
Query: 301 MRNEQSKGIDTPECVHSFDPSRCVGQIKH 215
+R E K I T EC HSF +KH
Sbjct: 76 IRKEDGKAIFTAECSHSFHFDCITSNVKH 104
>At3g13150.1 68416.m01645 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 551
Score = 27.1 bits (57), Expect = 8.9
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Frame = -2
Query: 306 DLCATSKARALIPLNAS--TPLTLVAAS-DRSNTFLRLRFNEKALSSFSKFVTPSLSSSK 136
DL A K P+++S T T V++S D S+ L L + SS S +P SSS
Sbjct: 405 DLSAGKKKTTSSPVSSSAKTTSTPVSSSPDTSSFLLSLSLAADSSSSDSDSSSPDSSSSV 464
Query: 135 IVPRLNSSSIAKKKDMDKAF 76
+SSS++ D +F
Sbjct: 465 SSSPDSSSSVSSSPDSYSSF 484
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,889,209
Number of Sequences: 28952
Number of extensions: 231116
Number of successful extensions: 653
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 653
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1112061928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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