Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0994
         (595 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   1.9  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   2.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.4  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    22   4.5  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    22   4.5  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    21   5.9  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   7.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.8  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 153 HHPNEPSMKQLVYQPDNDLCD 215
           HH   PS   LV+ PD ++CD
Sbjct: 943 HHMPCPS--NLVFNPDQNVCD 961


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 74   GPVDDDVRAQSAVGAQPVP 18
            GP+ DD++A +A G    P
Sbjct: 1085 GPLSDDIKAYTAEGVPEQP 1103


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +1

Query: 301  SAATSWRPTVSSSCTTWRP 357
            S  TSW P  +++   W+P
Sbjct: 1353 STTTSWNPGSTTNYPEWQP 1371


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 74  GPVDDDVRAQSAVGAQPVPLVPNS 3
           GPV+DDVR+    G  P+   P S
Sbjct: 83  GPVNDDVRSPGTPG--PLSQAPAS 104


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 74  GPVDDDVRAQSAVGAQPVPLVPNS 3
           GPV+DDVR+    G  P+   P S
Sbjct: 239 GPVNDDVRSPGTPG--PLSQAPAS 260


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 9   RHEGDRLRAYCALCTDIVVNGT 74
           RH  D L   C+ C++   NG+
Sbjct: 65  RHLPDALHTECSKCSETQKNGS 86


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +1

Query: 316 WRPTVSSSCTTWRPY 360
           WR T  ++C  +RP+
Sbjct: 514 WRETGEAACDPYRPW 528


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 117 LLIFFAEHLHTL 152
           L++FF E LHT+
Sbjct: 168 LIVFFTETLHTV 179


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 117 LLIFFAEHLHTL 152
           L++FF E LHT+
Sbjct: 168 LIVFFTETLHTV 179


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 117 LLIFFAEHLHTL 152
           L++FF E LHT+
Sbjct: 168 LIVFFTETLHTV 179


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 117 LLIFFAEHLHTL 152
           L++FF E LHT+
Sbjct: 168 LIVFFTETLHTV 179


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,630
Number of Sequences: 336
Number of extensions: 1976
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14935063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)