Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0994
         (595 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75537-3|CAA99836.1| 1096|Caenorhabditis elegans Hypothetical pr...    90   1e-18
Z82262-5|CAE17771.1|  679|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z68318-4|CAA92693.2| 1170|Caenorhabditis elegans Hypothetical pr...    28   5.8  
U46673-6|AAC48149.2| 1382|Caenorhabditis elegans P-glycoprotein ...    27   7.6  
U00050-9|AAA50695.2| 1154|Caenorhabditis elegans Hypothetical pr...    27   7.6  

>Z75537-3|CAA99836.1| 1096|Caenorhabditis elegans Hypothetical protein
            F18E2.3 protein.
          Length = 1096

 Score = 89.8 bits (213), Expect = 1e-18
 Identities = 55/165 (33%), Positives = 84/165 (50%), Gaps = 1/165 (0%)
 Frame = +3

Query: 90   EEAYTSICDLLIFFAEHLHTLHHPNEPSMKQLVYQPDNDLCDLLNDFIQEFVFVQHNYDG 269
            E+AY  ICDL+I F   L       EP    L+++PD  +   L  F+   VF   N D 
Sbjct: 799  EQAYLVICDLMILFGSQLAEESKALEP----LIWRPDAMVLGNLKIFLDVNVFDVSNLDD 854

Query: 270  QDER-RIEELHKRRNFLAAYCKLIVYNVAPIRRAADVFKHYIKCYNDYGDIIKATLSKAR 446
             D++ +IE +HK R  +A Y KLI++   P+  A+ + K Y   + D+GDI K  LSK R
Sbjct: 855  MDQQEKIEVMHKMRQHVAQYAKLIIHGAMPVAEASHLIKRYQSHFQDFGDIFKNLLSKCR 914

Query: 447  EINKLNCALTMELAMQALFRDLLRRHATPHRQLPEFLELKELAKR 581
            EI+ +   + +   ++ L+  L     T       F  +++LAKR
Sbjct: 915  EISFVETGVMICETLKTLYSQLDEDQGTDPLS-ESFNSIRDLAKR 958


>Z82262-5|CAE17771.1|  679|Caenorhabditis elegans Hypothetical
           protein C43F9.10 protein.
          Length = 679

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = -3

Query: 332 LTVGRQEVAALVQFLYASLILTIV 261
           LT+G+QE+  ++   Y S++L +V
Sbjct: 367 LTIGKQEIMFMILIFYVSIVLIVV 390


>Z68318-4|CAA92693.2| 1170|Caenorhabditis elegans Hypothetical
           protein T21B10.3 protein.
          Length = 1170

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
 Frame = +3

Query: 207 LCDLLNDFI----QEFVFVQHNY--DGQDERRIEELHKRRNFLAAYCKLIVYNVAPIRRA 368
           +CDLLN  +    +E V        DG D+R   +L KR + +  +   +  NV P    
Sbjct: 60  ICDLLNHLVIYLNEEIVETSSKACPDGMDDRHFVQLEKRMHLM--FEVYLAMNVVPDYLI 117

Query: 369 ADVFKH 386
            D+ KH
Sbjct: 118 PDLTKH 123


>U46673-6|AAC48149.2| 1382|Caenorhabditis elegans P-glycoprotein
           related protein 10 protein.
          Length = 1382

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 10/28 (35%), Positives = 19/28 (67%)
 Frame = +3

Query: 312 FLAAYCKLIVYNVAPIRRAADVFKHYIK 395
           F+AA+C+ I + ++ IR+   + K YI+
Sbjct: 167 FIAAFCQRIAWEISSIRQVFRIKKAYIR 194


>U00050-9|AAA50695.2| 1154|Caenorhabditis elegans Hypothetical protein
            F09F7.3 protein.
          Length = 1154

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -1

Query: 187  TSCFMDGSLGWCSVCRCS 134
            T C + GS GWC  CR S
Sbjct: 1102 TGCGVIGSKGWCQKCRSS 1119


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,504,746
Number of Sequences: 27780
Number of extensions: 206896
Number of successful extensions: 796
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 795
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)