Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0992
         (595 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0575 - 18876988-18877029,18877072-18877102,18878290-188784...    28   4.9  
04_04_1627 - 34867557-34870095,34870159-34870391,34871274-34871276     27   8.5  

>08_02_0575 -
           18876988-18877029,18877072-18877102,18878290-18878418,
           18878512-18879154,18882042-18883990,18884964-18885040
          Length = 956

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 8/34 (23%), Positives = 20/34 (58%)
 Frame = +3

Query: 21  HEGLISIKQLFCEDRYRCIDVDNVIINYLKKKTI 122
           H G++  + + C D      V ++++N++K+K +
Sbjct: 237 HRGILETEHISCSDEVVSCTVHDMVLNFIKRKAM 270


>04_04_1627 - 34867557-34870095,34870159-34870391,34871274-34871276
          Length = 924

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -1

Query: 325 YIVGLTQYAQD*RRIKFPDSFQSCGQIYNVKIILSRY 215
           Y+  L  Y  + R I   D F  CGQI   K+++ RY
Sbjct: 703 YVSHLPSYVNNERLI---DLFLPCGQITQAKVVVERY 736


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,271,287
Number of Sequences: 37544
Number of extensions: 204025
Number of successful extensions: 265
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 265
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1411925004
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)