Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0992
         (595 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132876-2|CAB60843.3|  534|Caenorhabditis elegans Hypothetical ...    30   1.4  
AF016436-3|AAC25896.1|  331|Caenorhabditis elegans Serpentine re...    29   1.9  
U58738-1|AAB00602.1|  290|Caenorhabditis elegans Hypothetical pr...    28   4.4  
Z71185-2|CAA94904.2|  522|Caenorhabditis elegans Hypothetical pr...    28   5.8  

>AL132876-2|CAB60843.3|  534|Caenorhabditis elegans Hypothetical
           protein Y105E8A.2 protein.
          Length = 534

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -2

Query: 228 Y*VDIFFTF*ICHNLYYISEPEDKI 154
           Y +D+++T+ +CH  Y I   EDK+
Sbjct: 111 YLIDVYWTYQVCHGRYVIQYHEDKM 135


>AF016436-3|AAC25896.1|  331|Caenorhabditis elegans Serpentine
           receptor, class j protein40 protein.
          Length = 331

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 15/52 (28%), Positives = 29/52 (55%)
 Frame = +1

Query: 286 FFNLVHIELNQRYICLRNSILYFIIVSL*FLVVQRAVTLYIV*YFISYILVL 441
           F  L+  E + ++   R  +LYF + +L + +V   V + I+ Y  SY+++L
Sbjct: 25  FIYLIFTESSNKFGNYRFLLLYFALFNLTYSIVNIVVPIDIITYRYSYMVIL 76


>U58738-1|AAB00602.1|  290|Caenorhabditis elegans Hypothetical
           protein F31A9.4 protein.
          Length = 290

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = +1

Query: 139 IFLKVNFIFRFTDIIQIVTYLESKKNIYSV*FLHCKFVHSS 261
           + LK+  ++RF  I+     +++ KNI+S     C+  HSS
Sbjct: 34  VLLKICSLYRF-QILDFFPTIQNNKNIFSHGIKFCELAHSS 73


>Z71185-2|CAA94904.2|  522|Caenorhabditis elegans Hypothetical
           protein C35A5.2 protein.
          Length = 522

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = -2

Query: 219 DIFFTF*I-CHNLYYISEPEDKIDF*KY*IKSPV*FFFLNN 100
           D+FFT  +    +   S+PE KIDF +  +++P  F F+N+
Sbjct: 209 DVFFTLFVDMPRMTSFSDPERKIDFYEMSVRAP--FMFMNS 247


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,129,846
Number of Sequences: 27780
Number of extensions: 239181
Number of successful extensions: 502
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 502
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)