Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0991
(567 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58727-2|AAB00582.2| 462|Caenorhabditis elegans Hypothetical pr... 32 0.25
AF016446-5|AAC24163.1| 329|Caenorhabditis elegans Serpentine re... 31 0.76
Z69788-1|CAA93646.1| 894|Caenorhabditis elegans Hypothetical pr... 29 3.1
AF016446-4|AAC24164.1| 321|Caenorhabditis elegans Serpentine re... 29 3.1
U55373-2|AAX88832.1| 349|Caenorhabditis elegans Serpentine rece... 28 5.4
U40029-2|ABD94115.1| 93|Caenorhabditis elegans Hypothetical pr... 28 5.4
U64848-8|ABS83847.1| 408|Caenorhabditis elegans Hypothetical pr... 27 7.1
U23514-6|AAC46544.2| 816|Caenorhabditis elegans Hypothetical pr... 27 7.1
AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm (myotubu... 27 9.4
>U58727-2|AAB00582.2| 462|Caenorhabditis elegans Hypothetical
protein D1005.2 protein.
Length = 462
Score = 32.3 bits (70), Expect = 0.25
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = -3
Query: 346 SIYTSSAAHDFPVPVHLTAVIDTCQESKMVGDRTFLDNVFKQNAKTTVS 200
SIY S D P L V+D C E +VGD TF NV K + K TV+
Sbjct: 394 SIYNSVEVVDLKFPHPL--VMDNCSEFAVVGDVTFGKNV-KLSGKVTVN 439
>AF016446-5|AAC24163.1| 329|Caenorhabditis elegans Serpentine
receptor, class h protein22 protein.
Length = 329
Score = 30.7 bits (66), Expect = 0.76
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 4/99 (4%)
Frame = +2
Query: 200 TYGRFRVLLEHIVQKRSISHHFGFLTG--VNDSCQVNRHREVVCSTGC--IYRVYTPSVQ 367
TY F LL H+++ H FL V+ R ++ G + + Y S+
Sbjct: 43 TYRYF--LLWHVLENLFFEMHSDFLVAPAVHPPFCAIRATGILSQIGMSSLVQFYWLSLA 100
Query: 368 YCYSE*FCISERYYFFYVWTILNYYFFTCVRYLKLCTYY 484
Y+ +SE +YF Y +ILNY + ++KL Y+
Sbjct: 101 IQYTA-ASVSEMFYFRYKASILNYKTYRFTYFIKLSVYF 138
>Z69788-1|CAA93646.1| 894|Caenorhabditis elegans Hypothetical
protein F09A5.2 protein.
Length = 894
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/62 (20%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Frame = +2
Query: 194 SQTYGRFRVLLEHIVQKRSISHHFGFLTGVNDSCQVNRHREVVCSTGCIYRVYTP--SVQ 367
S+ G + ++ + +H F ++ ++ H V+ GC+ Y P V+
Sbjct: 502 SENNGHYEAAIKKLPAHADEQNHLDFFHEIDFMKRLGHHPHVISMLGCVSNPYEPLIVVE 561
Query: 368 YC 373
YC
Sbjct: 562 YC 563
>AF016446-4|AAC24164.1| 321|Caenorhabditis elegans Serpentine
receptor, class h protein23 protein.
Length = 321
Score = 28.7 bits (61), Expect = 3.1
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 392 ISERYYFFYVWTILNYYFFTCVRYLKLCTYY 484
+SE +YF Y +ILNY + ++K Y+
Sbjct: 108 VSEMFYFRYKASILNYKTYRFTYFIKFTVYF 138
>U55373-2|AAX88832.1| 349|Caenorhabditis elegans Serpentine
receptor, class h protein76, isoform b protein.
Length = 349
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +1
Query: 346 SVYAISAVLLFRVILYIGAILFFLCLDNT*LLFFYMRSLLKVVY 477
SV++IS FR+I Y+ ++L FLC LLF+ L +V+
Sbjct: 200 SVFSISTDANFRLI-YMVSMLIFLCSTFVQLLFYAFTCLRYLVF 242
>U40029-2|ABD94115.1| 93|Caenorhabditis elegans Hypothetical
protein F10G7.12 protein.
Length = 93
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/23 (47%), Positives = 19/23 (82%), Gaps = 1/23 (4%)
Frame = -3
Query: 463 VTNA-CKKIIIKYCPNIKKIISL 398
V+NA K+I++K CP +KK+I++
Sbjct: 53 VSNAEAKEIVLKLCPAVKKLITI 75
>U64848-8|ABS83847.1| 408|Caenorhabditis elegans Hypothetical
protein C50E3.16 protein.
Length = 408
Score = 27.5 bits (58), Expect = 7.1
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +1
Query: 325 QHWMYI*SVYAISAVLLFRVILYIGAILFFLCLDNT*LLFFYMRSLLKVVYLLLF 489
QH + S + ++ VLL++ IL I A+ +F C ++F + RS+ + L LF
Sbjct: 30 QHTVLNISEHTLNNVLLYKPILIIEALSYFACW----MIFVFGRSVWCMQLLELF 80
>U23514-6|AAC46544.2| 816|Caenorhabditis elegans Hypothetical
protein F48E8.4 protein.
Length = 816
Score = 27.5 bits (58), Expect = 7.1
Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Frame = +3
Query: 225 LNTLSKNVRSPTILDS*QVSMTAVK*TGTGKSCAALDVYIE----CIRHQCSTVIPSNFV 392
L +++ P+ +S + V+ T T + L+ Y E +R++C + +N V
Sbjct: 160 LGLFDGSLKMPSYQESTDDRLLFVEETYTSGTFCDLEEYREPRMTSVRYECDAQLSTNEV 219
Query: 393 YRSDIIFFMFGQYLIII 443
Y S ++ QYL+I+
Sbjct: 220 YISSVVEVKPCQYLMIV 236
>AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm
(myotubularin) family protein 5 protein.
Length = 1744
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -1
Query: 294 QLSLTPVKNPKWWEIERFWTMC 229
Q T V+ K W+ +RFWT C
Sbjct: 623 QYMYTAVQEHKVWKNQRFWTSC 644
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,931,629
Number of Sequences: 27780
Number of extensions: 282201
Number of successful extensions: 716
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 715
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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