Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0991
         (567 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    26   0.30 
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    21   8.6  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 25.8 bits (54), Expect = 0.30
 Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
 Frame = +2

Query: 338 IYRVYTPSVQYCYSE*FCISERYYFFYVW--TILNYYFFTCVRYLKLCTYYYLMNVGSLG 511
           IY +++    Y + E FCI + +        T+L    FT  RY+ +C  +    +  L 
Sbjct: 111 IYYIWS-HFPYVFGEAFCIIQSFAAETSANATVLTITAFTVERYIAICHPFISHTMSKLS 169

Query: 512 RRKKALIKV 538
           R  K +I +
Sbjct: 170 RAVKFIIVI 178


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 272 LTGVNDSCQVNRHREVVCST 331
           LTG+ND+   N    + C+T
Sbjct: 671 LTGINDARLRNTMENLTCAT 690


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,911
Number of Sequences: 438
Number of extensions: 4024
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16440594
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)