Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0989
         (637 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    27   0.099
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    25   0.40 
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    23   2.8  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    23   2.8  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    22   3.7  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    22   3.7  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    22   3.7  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   6.5  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   6.5  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   8.6  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    21   8.6  

>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 27.5 bits (58), Expect = 0.099
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +3

Query: 333 VIKPVIH*YWKNAKTLNGTSLDIYKQTRLTNY 428
           ++KP+I  Y+K  KTLNG  +   ++    ++
Sbjct: 126 IVKPIIAFYYKPIKTLNGHEIKFIRKEEYISF 157


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 25.4 bits (53), Expect = 0.40
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 259 TCRTYCGSLQCWPE 300
           TC   CGS Q WP+
Sbjct: 81  TCSMLCGSTQLWPQ 94


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = -1

Query: 112 RFNYPHPPKKYELNRH 65
           ++NYP+P ++Y  N++
Sbjct: 349 QYNYPNPQQQYYYNKN 364


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = -1

Query: 112 RFNYPHPPKKYELNRH 65
           ++NYP+P ++Y  N++
Sbjct: 297 QYNYPNPQQQYYYNKN 312


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 434 SPGLFMVETVDSEKLADNLNKQWLKY 511
           S GL+ ++ V + +L   L+  W KY
Sbjct: 322 SEGLYHLDEVYNNQLLTRLDDNWNKY 347


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 434 SPGLFMVETVDSEKLADNLNKQWLKY 511
           S GL+ ++ V + +L   L+  W KY
Sbjct: 322 SEGLYHLDEVYNNQLLTRLDDNWNKY 347


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 434 SPGLFMVETVDSEKLADNLNKQWLKY 511
           S GL+ ++ V + +L   L+  W KY
Sbjct: 322 SEGLYHLDEVYNNQLLTRLDDNWNKY 347


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -3

Query: 527 FPSPSYISTIAYSNYQLIFLNQLFQP 450
           FP   +I+  AY N ++  L   + P
Sbjct: 173 FPETQFIAVTAYQNEEVTALKIKYNP 198


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/23 (34%), Positives = 10/23 (43%)
 Frame = +1

Query: 223 DSTKIGCCIKN*TCRTYCGSLQC 291
           D  + G C  N TC    G  +C
Sbjct: 262 DDCRPGACHNNGTCLDKVGGFEC 284


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = -3

Query: 206 FFWPRQFQFVKEPSSIHTLCQ 144
           ++WP  ++ +K+      LCQ
Sbjct: 156 YYWPNMYRTIKKRLRSCDLCQ 176


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +2

Query: 455 ETVDSEKLADNLNKQWLKYRKEKERLRV 538
           E  +S  L++   K W + R+ KER +V
Sbjct: 188 ELANSLGLSERQVKIWFQNRRAKERKQV 215


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,154
Number of Sequences: 336
Number of extensions: 3035
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)