Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0989
         (637 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003497-1|AAO39501.1|  254|Drosophila melanogaster RE46560p pro...   175   3e-44
AE014297-4555|AAF57017.2|  254|Drosophila melanogaster CG1983-PA...   175   3e-44
BT003582-1|AAO39586.1|  760|Drosophila melanogaster LD18312p pro...    34   0.19 
AF132164-1|AAD34752.1|  969|Drosophila melanogaster unknown prot...    34   0.19 
AE014296-3650|AAG22184.1|  767|Drosophila melanogaster CG7139-PB...    34   0.19 
AE014296-3649|AAF51804.1|  969|Drosophila melanogaster CG7139-PA...    34   0.19 
AY118995-1|AAM50855.1|  232|Drosophila melanogaster LP02831p pro...    29   7.0  
AF274016-1|AAF90142.1|  232|Drosophila melanogaster tetraspanin ...    29   7.0  
AE013599-279|AAF59313.2|  232|Drosophila melanogaster CG12847-PA...    29   7.0  

>BT003497-1|AAO39501.1|  254|Drosophila melanogaster RE46560p
           protein.
          Length = 254

 Score =  175 bits (427), Expect = 3e-44
 Identities = 83/165 (50%), Positives = 113/165 (68%), Gaps = 1/165 (0%)
 Frame = +2

Query: 137 AKVDIMYGLKTVLSQIEIAVARRSKDLPQIAPRLVAVSKIKPVELIVEAYNAGQRHFGEN 316
           A+ D+  GL+ VL +I+  + +R K++    P LVAVSK KP E ++EAY  GQR FGEN
Sbjct: 7   AEFDVKAGLQHVLKRIDEVLLQRPKEVQAARPLLVAVSKTKPAEAVIEAYEGGQRDFGEN 66

Query: 317 YVNELSDKASDPLILEKCKDIKWHFIGHLQTNKINKLLGSPGLFMVETVDSEKLADNLNK 496
           YV EL +K+  P IL KC DI+WHFIGH+Q+NKINK+L  P L M++TVDSEKLA  L+ 
Sbjct: 67  YVQELEEKSRHPDILAKCPDIRWHFIGHMQSNKINKILSVPNLHMIQTVDSEKLATKLDA 126

Query: 497 QWLKYR-KEKERLRVMVQVNTSGEQAKSGLEPLETTKAVEHILEN 628
            W K +   +E L+V++Q+NTSGE  KSG+E  +     ++I  N
Sbjct: 127 AWSKRQPTPEEPLQVLIQINTSGEDVKSGIEAKDAPALYQYIKSN 171


>AE014297-4555|AAF57017.2|  254|Drosophila melanogaster CG1983-PA
           protein.
          Length = 254

 Score =  175 bits (427), Expect = 3e-44
 Identities = 83/165 (50%), Positives = 113/165 (68%), Gaps = 1/165 (0%)
 Frame = +2

Query: 137 AKVDIMYGLKTVLSQIEIAVARRSKDLPQIAPRLVAVSKIKPVELIVEAYNAGQRHFGEN 316
           A+ D+  GL+ VL +I+  + +R K++    P LVAVSK KP E ++EAY  GQR FGEN
Sbjct: 7   AEFDVKAGLQHVLKRIDEVLLQRPKEVQAARPLLVAVSKTKPAEAVIEAYEGGQRDFGEN 66

Query: 317 YVNELSDKASDPLILEKCKDIKWHFIGHLQTNKINKLLGSPGLFMVETVDSEKLADNLNK 496
           YV EL +K+  P IL KC DI+WHFIGH+Q+NKINK+L  P L M++TVDSEKLA  L+ 
Sbjct: 67  YVQELEEKSRHPDILAKCPDIRWHFIGHMQSNKINKILSVPNLHMIQTVDSEKLATKLDA 126

Query: 497 QWLKYR-KEKERLRVMVQVNTSGEQAKSGLEPLETTKAVEHILEN 628
            W K +   +E L+V++Q+NTSGE  KSG+E  +     ++I  N
Sbjct: 127 AWSKRQPTPEEPLQVLIQINTSGEDVKSGIEAKDAPALYQYIKSN 171


>BT003582-1|AAO39586.1|  760|Drosophila melanogaster LD18312p
           protein.
          Length = 760

 Score = 33.9 bits (74), Expect = 0.19
 Identities = 33/136 (24%), Positives = 60/136 (44%), Gaps = 5/136 (3%)
 Frame = +2

Query: 89  WWMRIIKS-SVMTSEVDAKVDIMYGLKTVLSQIEIAVARRSKDLPQIAPRLVAVSKIKPV 265
           +W + + S     + V    D +     V S++ I    R ++  ++ P     S  KP+
Sbjct: 110 YWSQTVNSVDTGDATVPEIPDALGAAAPVKSELSIIDLLREENQIKVVPSKAESSGAKPL 169

Query: 266 EL-IVEAYNA--GQRHFGENYVNELSDKASDPLILEKCK-DIKWHFIGHLQTNKINKLLG 433
           E+  ++  N   G  H  + Y N+      D  +  KC+ D+ W     L+ +++N   G
Sbjct: 170 EMHSLDCPNEPKGFAHLRQMYPNKQLAGLWDLFV--KCQADVDWAVDILLKEDELNAATG 227

Query: 434 SPGLFMVETVDSEKLA 481
           S  +   ET+DSE+ A
Sbjct: 228 SDQIGFEETIDSEEAA 243


>AF132164-1|AAD34752.1|  969|Drosophila melanogaster unknown
           protein.
          Length = 969

 Score = 33.9 bits (74), Expect = 0.19
 Identities = 33/136 (24%), Positives = 60/136 (44%), Gaps = 5/136 (3%)
 Frame = +2

Query: 89  WWMRIIKS-SVMTSEVDAKVDIMYGLKTVLSQIEIAVARRSKDLPQIAPRLVAVSKIKPV 265
           +W + + S     + V    D +     V S++ I    R ++  ++ P     S  KP+
Sbjct: 319 YWSQTVNSVDTGDATVPEIPDALGAAAPVKSELSIIDLLREENQIKVVPSKAESSGAKPL 378

Query: 266 EL-IVEAYNA--GQRHFGENYVNELSDKASDPLILEKCK-DIKWHFIGHLQTNKINKLLG 433
           E+  ++  N   G  H  + Y N+      D  +  KC+ D+ W     L+ +++N   G
Sbjct: 379 EMHSLDCPNEPKGFAHLRQMYPNKQLAGLWDLFV--KCQADVDWAVDILLKEDELNAATG 436

Query: 434 SPGLFMVETVDSEKLA 481
           S  +   ET+DSE+ A
Sbjct: 437 SDQIGFEETIDSEEAA 452


>AE014296-3650|AAG22184.1|  767|Drosophila melanogaster CG7139-PB,
           isoform B protein.
          Length = 767

 Score = 33.9 bits (74), Expect = 0.19
 Identities = 33/136 (24%), Positives = 60/136 (44%), Gaps = 5/136 (3%)
 Frame = +2

Query: 89  WWMRIIKS-SVMTSEVDAKVDIMYGLKTVLSQIEIAVARRSKDLPQIAPRLVAVSKIKPV 265
           +W + + S     + V    D +     V S++ I    R ++  ++ P     S  KP+
Sbjct: 117 YWSQTVNSVDTGDATVPEIPDALGAAAPVKSELSIIDLLREENQIKVVPSKAESSGAKPL 176

Query: 266 EL-IVEAYNA--GQRHFGENYVNELSDKASDPLILEKCK-DIKWHFIGHLQTNKINKLLG 433
           E+  ++  N   G  H  + Y N+      D  +  KC+ D+ W     L+ +++N   G
Sbjct: 177 EMHSLDCPNEPKGFAHLRQMYPNKQLAGLWDLFV--KCQADVDWAVDILLKEDELNAATG 234

Query: 434 SPGLFMVETVDSEKLA 481
           S  +   ET+DSE+ A
Sbjct: 235 SDQIGFEETIDSEEAA 250


>AE014296-3649|AAF51804.1|  969|Drosophila melanogaster CG7139-PA,
           isoform A protein.
          Length = 969

 Score = 33.9 bits (74), Expect = 0.19
 Identities = 33/136 (24%), Positives = 60/136 (44%), Gaps = 5/136 (3%)
 Frame = +2

Query: 89  WWMRIIKS-SVMTSEVDAKVDIMYGLKTVLSQIEIAVARRSKDLPQIAPRLVAVSKIKPV 265
           +W + + S     + V    D +     V S++ I    R ++  ++ P     S  KP+
Sbjct: 319 YWSQTVNSVDTGDATVPEIPDALGAAAPVKSELSIIDLLREENQIKVVPSKAESSGAKPL 378

Query: 266 EL-IVEAYNA--GQRHFGENYVNELSDKASDPLILEKCK-DIKWHFIGHLQTNKINKLLG 433
           E+  ++  N   G  H  + Y N+      D  +  KC+ D+ W     L+ +++N   G
Sbjct: 379 EMHSLDCPNEPKGFAHLRQMYPNKQLAGLWDLFV--KCQADVDWAVDILLKEDELNAATG 436

Query: 434 SPGLFMVETVDSEKLA 481
           S  +   ET+DSE+ A
Sbjct: 437 SDQIGFEETIDSEEAA 452


>AY118995-1|AAM50855.1|  232|Drosophila melanogaster LP02831p
           protein.
          Length = 232

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 11/31 (35%), Positives = 22/31 (70%)
 Frame = +2

Query: 41  LINFIMYLVAI*FILFWWMRIIKSSVMTSEV 133
           ++NFI+Y+V I F++   + I+  S+M S++
Sbjct: 7   IVNFILYIVNIVFLIVGILLIVLGSIMLSDL 37


>AF274016-1|AAF90142.1|  232|Drosophila melanogaster tetraspanin
           42Ec protein.
          Length = 232

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 11/31 (35%), Positives = 22/31 (70%)
 Frame = +2

Query: 41  LINFIMYLVAI*FILFWWMRIIKSSVMTSEV 133
           ++NFI+Y+V I F++   + I+  S+M S++
Sbjct: 7   IVNFILYIVNIVFLIVGILLIVLGSIMLSDL 37


>AE013599-279|AAF59313.2|  232|Drosophila melanogaster CG12847-PA
           protein.
          Length = 232

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 11/31 (35%), Positives = 22/31 (70%)
 Frame = +2

Query: 41  LINFIMYLVAI*FILFWWMRIIKSSVMTSEV 133
           ++NFI+Y+V I F++   + I+  S+M S++
Sbjct: 7   IVNFILYIVNIVFLIVGILLIVLGSIMLSDL 37


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,065,173
Number of Sequences: 53049
Number of extensions: 502704
Number of successful extensions: 1044
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1042
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2662347150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)