Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0989
         (637 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U37429-4|AAA79348.1|  244|Caenorhabditis elegans Hypothetical pr...   144   5e-35
AF047655-10|AAC04396.1|  335|Caenorhabditis elegans Hypothetical...    30   1.2  
Z49126-2|CAA88939.2|  411|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z46794-6|CAA86776.1|  416|Caenorhabditis elegans Hypothetical pr...    29   2.1  
Z93378-3|CAB07585.3|  749|Caenorhabditis elegans Hypothetical pr...    28   6.4  
Z70750-13|CAA94745.2|  679|Caenorhabditis elegans Hypothetical p...    27   8.5  
Z29121-6|CAH19096.1|  405|Caenorhabditis elegans Hypothetical pr...    27   8.5  
Z29121-5|CAD54174.2|  403|Caenorhabditis elegans Hypothetical pr...    27   8.5  
Z22180-12|CAH19086.1|  405|Caenorhabditis elegans Hypothetical p...    27   8.5  
Z22180-11|CAD54147.2|  403|Caenorhabditis elegans Hypothetical p...    27   8.5  
U80027-20|AAC48113.2|  400|Caenorhabditis elegans Hypothetical p...    27   8.5  
U55373-2|AAX88832.1|  349|Caenorhabditis elegans Serpentine rece...    27   8.5  
AF239998-1|AAF63494.1|  679|Caenorhabditis elegans MDF-1 protein.      27   8.5  

>U37429-4|AAA79348.1|  244|Caenorhabditis elegans Hypothetical
           protein F09E5.8 protein.
          Length = 244

 Score =  144 bits (349), Expect = 5e-35
 Identities = 71/135 (52%), Positives = 90/135 (66%)
 Frame = +2

Query: 233 RLVAVSKIKPVELIVEAYNAGQRHFGENYVNELSDKASDPLILEKCKDIKWHFIGHLQTN 412
           RLVAVSK K  +LI   Y+  QRHFGENYV EL +K+   ++  KC DI+WHFIG +Q+N
Sbjct: 31  RLVAVSKTKSADLIEACYSQNQRHFGENYVQELEEKSD--VLASKCLDIRWHFIGQVQSN 88

Query: 413 KINKLLGSPGLFMVETVDSEKLADNLNKQWLKYRKEKERLRVMVQVNTSGEQAKSGLEPL 592
           KI K+  SPGL+ VETV++EK A   +K+W K+      LRV+VQVNTSGE  K G+E  
Sbjct: 89  KIGKICNSPGLWCVETVETEKHARIFDKEWSKHGANLSPLRVLVQVNTSGEDNKGGIEIG 148

Query: 593 ETTKAVEHILENCPN 637
           E  K  E I + C N
Sbjct: 149 EAPKLAEFIRKECQN 163


>AF047655-10|AAC04396.1|  335|Caenorhabditis elegans Hypothetical
           protein C17B7.2 protein.
          Length = 335

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +2

Query: 305 FGENYVNELSDKASDPLILEKCKD 376
           F ENY  EL +K    ++ EKCKD
Sbjct: 265 FPENYEEELDEKKKKEMLQEKCKD 288


>Z49126-2|CAA88939.2|  411|Caenorhabditis elegans Hypothetical
           protein DH11.2 protein.
          Length = 411

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = +2

Query: 179 QIEIAVARRSKDLPQIAPRLVA--VSKIKPVELIVEAYNAGQRHFG 310
           ++ +   + S DLPQ+   ++   VSK+ P EL+   ++   R FG
Sbjct: 10  RLPVVRVQDSSDLPQLPDEIIEIIVSKVLPTELVAYGWDQVSRSFG 55



 Score = 27.9 bits (59), Expect = 6.4
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -3

Query: 368 IFPVLMDHWLYHLIRLHSFLRSASGQHC 285
           + PV +   + HL+  HSFL + SG  C
Sbjct: 110 VLPVSLFSHIQHLLEKHSFLAATSGTAC 137


>Z46794-6|CAA86776.1|  416|Caenorhabditis elegans Hypothetical
           protein R06F6.6 protein.
          Length = 416

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 14/40 (35%), Positives = 25/40 (62%)
 Frame = +2

Query: 176 SQIEIAVARRSKDLPQIAPRLVAVSKIKPVELIVEAYNAG 295
           +Q + A + +S+DLP IAP  V+  +I  V++ +E   +G
Sbjct: 344 AQYDSADSSQSEDLPDIAPESVSSEEIIEVDVNIEGSGSG 383


>Z93378-3|CAB07585.3|  749|Caenorhabditis elegans Hypothetical
           protein F19H8.4 protein.
          Length = 749

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -2

Query: 168 VFNPYIMSTLASTSLVITEDLI 103
           VFNPY++S L  + LVI  D++
Sbjct: 692 VFNPYVLSPLILSPLVICPDVV 713


>Z70750-13|CAA94745.2|  679|Caenorhabditis elegans Hypothetical
           protein C50F4.11 protein.
          Length = 679

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 20/88 (22%), Positives = 42/88 (47%)
 Frame = +2

Query: 362 EKCKDIKWHFIGHLQTNKINKLLGSPGLFMVETVDSEKLADNLNKQWLKYRKEKERLRVM 541
           +K K   +     ++  KIN  +    +  +E   ++K  ++  +Q +  R++ ER++ M
Sbjct: 42  KKLKQATFRRHAPVEARKINFDMTLSPVAPIELASAKKEKESAQRQLVTLREDHERMKQM 101

Query: 542 VQVNTSGEQAKSGLEPLETTKAVEHILE 625
           +Q N    QAK   + ++     E +LE
Sbjct: 102 MQTN----QAKLAEKTIDLETNREKMLE 125


>Z29121-6|CAH19096.1|  405|Caenorhabditis elegans Hypothetical
           protein ZK757.4b protein.
          Length = 405

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -2

Query: 600 VVSNGSKPLFACSPLVLTCTITLNLSFSFLY 508
           V+SNG  PL     L L+C  +L+LSF F Y
Sbjct: 233 VLSNGRFPLVFL--LFLSCMFSLSLSFLFFY 261


>Z29121-5|CAD54174.2|  403|Caenorhabditis elegans Hypothetical
           protein ZK757.4a protein.
          Length = 403

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -2

Query: 600 VVSNGSKPLFACSPLVLTCTITLNLSFSFLY 508
           V+SNG  PL     L L+C  +L+LSF F Y
Sbjct: 231 VLSNGRFPLVFL--LFLSCMFSLSLSFLFFY 259


>Z22180-12|CAH19086.1|  405|Caenorhabditis elegans Hypothetical
           protein ZK757.4b protein.
          Length = 405

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -2

Query: 600 VVSNGSKPLFACSPLVLTCTITLNLSFSFLY 508
           V+SNG  PL     L L+C  +L+LSF F Y
Sbjct: 233 VLSNGRFPLVFL--LFLSCMFSLSLSFLFFY 261


>Z22180-11|CAD54147.2|  403|Caenorhabditis elegans Hypothetical
           protein ZK757.4a protein.
          Length = 403

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -2

Query: 600 VVSNGSKPLFACSPLVLTCTITLNLSFSFLY 508
           V+SNG  PL     L L+C  +L+LSF F Y
Sbjct: 231 VLSNGRFPLVFL--LFLSCMFSLSLSFLFFY 259


>U80027-20|AAC48113.2|  400|Caenorhabditis elegans Hypothetical
           protein T28A11.2a protein.
          Length = 400

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 305 FGENYVNELSDKASDPLILEKCKD 376
           F ENY  EL +K    ++ E CKD
Sbjct: 330 FLENYEEELDEKKKKQMLQENCKD 353


>U55373-2|AAX88832.1|  349|Caenorhabditis elegans Serpentine
           receptor, class h protein76, isoform b protein.
          Length = 349

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 15/31 (48%), Positives = 15/31 (48%)
 Frame = -3

Query: 548 LVP*LSIFPSPSYISTIAYSNYQLIFLNQLF 456
           LVP   I PS SY     YSNY    LN  F
Sbjct: 268 LVPYAFIVPSVSYCCYSVYSNYYNQMLNNFF 298


>AF239998-1|AAF63494.1|  679|Caenorhabditis elegans MDF-1 protein.
          Length = 679

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 20/88 (22%), Positives = 42/88 (47%)
 Frame = +2

Query: 362 EKCKDIKWHFIGHLQTNKINKLLGSPGLFMVETVDSEKLADNLNKQWLKYRKEKERLRVM 541
           +K K   +     ++  KIN  +    +  +E   ++K  ++  +Q +  R++ ER++ M
Sbjct: 42  KKLKQATFRRHAPVEARKINFDMTLSPVAPIELASAKKEKESAQRQLVTLREDHERMKQM 101

Query: 542 VQVNTSGEQAKSGLEPLETTKAVEHILE 625
           +Q N    QAK   + ++     E +LE
Sbjct: 102 MQTN----QAKLAEKTIDLETNREKMLE 125


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,640,345
Number of Sequences: 27780
Number of extensions: 268415
Number of successful extensions: 681
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 680
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)