Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0988
         (552 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29529-1|AAB49330.1|  186|Drosophila melanogaster guf protein.         57   1e-08
AF038597-1|AAC97538.1|  254|Drosophila melanogaster ornithine de...    57   1e-08
AE013599-1406|AAF58570.2|  248|Drosophila melanogaster CG16747-P...    57   1e-08
AE013599-1405|AAF58567.2|  270|Drosophila melanogaster CG16747-P...    57   1e-08
AE013599-1404|AAF58569.2|  254|Drosophila melanogaster CG16747-P...    57   1e-08
U92536-1|AAD41441.1| 1487|Drosophila melanogaster RECQ helicase ...    28   7.3  
M82887-1|AAB59218.1|  640|Drosophila melanogaster dual bar prote...    28   7.3  

>U29529-1|AAB49330.1|  186|Drosophila melanogaster guf protein.
          Length = 186

 Score = 57.2 bits (132), Expect = 1e-08
 Identities = 29/66 (43%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
 Frame = -1

Query: 549 SFMLLLDFAEERLGCKSCIICVLKSRPDRATLLRTFMFMGFQVLAPNSP-LTPQHIN-NP 376
           +F+ LL+FAEE+L     ++ + K +PDRA L+  F+FMGF+ L+  +P   P  IN N 
Sbjct: 117 TFISLLEFAEEKLEVDGIVMVMPKDQPDRARLIEAFLFMGFEPLSRKAPQAPPAAINDNE 176

Query: 375 NYIFLH 358
           NY FL+
Sbjct: 177 NYYFLY 182


>AF038597-1|AAC97538.1|  254|Drosophila melanogaster ornithine
           decarboxylase antizyme protein.
          Length = 254

 Score = 57.2 bits (132), Expect = 1e-08
 Identities = 29/66 (43%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
 Frame = -1

Query: 549 SFMLLLDFAEERLGCKSCIICVLKSRPDRATLLRTFMFMGFQVLAPNSP-LTPQHIN-NP 376
           +F+ LL+FAEE+L     ++ + K +PDRA L+  F+FMGF+ L+  +P   P  IN N 
Sbjct: 185 TFISLLEFAEEKLEVDGIVMVMPKDQPDRARLIEAFLFMGFEPLSRKAPQAPPAAINDNE 244

Query: 375 NYIFLH 358
           NY FL+
Sbjct: 245 NYYFLY 250


>AE013599-1406|AAF58570.2|  248|Drosophila melanogaster CG16747-PB,
           isoform B protein.
          Length = 248

 Score = 57.2 bits (132), Expect = 1e-08
 Identities = 29/66 (43%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
 Frame = -1

Query: 549 SFMLLLDFAEERLGCKSCIICVLKSRPDRATLLRTFMFMGFQVLAPNSP-LTPQHIN-NP 376
           +F+ LL+FAEE+L     ++ + K +PDRA L+  F+FMGF+ L+  +P   P  IN N 
Sbjct: 179 TFISLLEFAEEKLEVDGIVMVMPKDQPDRARLIEAFLFMGFEPLSRKAPQAPPAAINDNE 238

Query: 375 NYIFLH 358
           NY FL+
Sbjct: 239 NYYFLY 244


>AE013599-1405|AAF58567.2|  270|Drosophila melanogaster CG16747-PC,
           isoform C protein.
          Length = 270

 Score = 57.2 bits (132), Expect = 1e-08
 Identities = 29/66 (43%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
 Frame = -1

Query: 549 SFMLLLDFAEERLGCKSCIICVLKSRPDRATLLRTFMFMGFQVLAPNSP-LTPQHIN-NP 376
           +F+ LL+FAEE+L     ++ + K +PDRA L+  F+FMGF+ L+  +P   P  IN N 
Sbjct: 201 TFISLLEFAEEKLEVDGIVMVMPKDQPDRARLIEAFLFMGFEPLSRKAPQAPPAAINDNE 260

Query: 375 NYIFLH 358
           NY FL+
Sbjct: 261 NYYFLY 266


>AE013599-1404|AAF58569.2|  254|Drosophila melanogaster CG16747-PA,
           isoform A protein.
          Length = 254

 Score = 57.2 bits (132), Expect = 1e-08
 Identities = 29/66 (43%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
 Frame = -1

Query: 549 SFMLLLDFAEERLGCKSCIICVLKSRPDRATLLRTFMFMGFQVLAPNSP-LTPQHIN-NP 376
           +F+ LL+FAEE+L     ++ + K +PDRA L+  F+FMGF+ L+  +P   P  IN N 
Sbjct: 185 TFISLLEFAEEKLEVDGIVMVMPKDQPDRARLIEAFLFMGFEPLSRKAPQAPPAAINDNE 244

Query: 375 NYIFLH 358
           NY FL+
Sbjct: 245 NYYFLY 250


>U92536-1|AAD41441.1| 1487|Drosophila melanogaster RECQ helicase
           homolog protein.
          Length = 1487

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = +1

Query: 412 RSQNLESHEHEGAQQGSAVGTTLQNADDATLTAETLFSEIQEQHE 546
           +S  L+    E    G   GTT    DD     E L +EI+++H+
Sbjct: 566 QSMMLDGDLEEEQLNGPTQGTTTSGMDDGEDDLEGLLAEIEDEHQ 610


>M82887-1|AAB59218.1|  640|Drosophila melanogaster dual bar protein
           protein.
          Length = 640

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
 Frame = -3

Query: 496 HHLRFEESSRPRYPAAHLHVHGIPSSGSEFAA--DPTAHQQ--P*LH 368
           HHL+ E   R R  A H H HG+P   ++  +     +HQQ  P LH
Sbjct: 206 HHLQLE---RERLEALHRHGHGLPGDPAQHLSHLSHLSHQQHHPHLH 249


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,240,809
Number of Sequences: 53049
Number of extensions: 369135
Number of successful extensions: 967
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 965
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2110522698
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)