Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0985
(528 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_1119 + 10331275-10331330,10331343-10331462,10332023-10332164 30 1.3
01_06_1660 + 38966999-38967001,38967685-38967757,38967841-389679... 30 1.3
01_06_1659 + 38961637-38961639,38962361-38962433,38962531-389626... 30 1.3
01_03_0176 - 13461331-13461573,13464880-13465106,13465214-13465535 29 2.3
07_03_0765 - 21341872-21342198,21342482-21342635,21342716-213429... 28 5.3
11_04_0208 - 14871412-14872198,14872932-14873206,14873819-14873851 27 7.1
06_03_0032 - 15697530-15697669,15699215-15699437,15699823-156999... 27 7.1
03_04_0085 - 17182662-17182963,17183044-17183101,17183564-171836... 27 9.3
>07_01_1119 + 10331275-10331330,10331343-10331462,10332023-10332164
Length = 105
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +1
Query: 238 TKVFRKRNNQGLHALKTPKYKFLTKEELELEIAKANEKADVLLHIPPVLK 387
TK KR LH++K KY+ ++ + ++A +K + +L +PP+LK
Sbjct: 53 TKGSLKRRT-ALHSIKKKKYEKTVQQRDPKDPSRATKKKNNILALPPLLK 101
>01_06_1660 +
38966999-38967001,38967685-38967757,38967841-38967923,
38968042-38968168,38968260-38968339,38968428-38968544,
38968711-38968845,38969046-38969215,38969300-38969417
Length = 301
Score = 29.9 bits (64), Expect = 1.3
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 262 NQGLHALKTPKYKFLTKEELELEIAKANEKADVLL 366
NQ + TPKY+F+T +++ +I A D+++
Sbjct: 39 NQDKNKYNTPKYRFVTNKDITAQIVYATIAGDIVM 73
>01_06_1659 +
38961637-38961639,38962361-38962433,38962531-38962613,
38962732-38962858,38962950-38963029,38963112-38963228,
38963393-38963527,38963714-38963883,38963970-38964087
Length = 301
Score = 29.9 bits (64), Expect = 1.3
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 262 NQGLHALKTPKYKFLTKEELELEIAKANEKADVLL 366
NQ + TPKY+F+T +++ +I A D+++
Sbjct: 39 NQDKNKYNTPKYRFVTNKDITAQIVYATIAGDIVM 73
>01_03_0176 - 13461331-13461573,13464880-13465106,13465214-13465535
Length = 263
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -2
Query: 251 RKTLVKSGRVNLFNRFCTFGVKNFGAGSCSPS*NDGT---MFNFRLDI 117
R+ ++ R + FN FC + +K F G +P + T +F+F +D+
Sbjct: 188 RRNFLRGCRAHQFNEFCDYDLKLFIPGCTAPDVEEETFSVVFSFFVDV 235
>07_03_0765 -
21341872-21342198,21342482-21342635,21342716-21342953,
21343072-21343282,21343475-21343611,21347267-21348179
Length = 659
Score = 27.9 bits (59), Expect = 5.3
Identities = 28/103 (27%), Positives = 39/103 (37%), Gaps = 4/103 (3%)
Frame = +1
Query: 40 CLYCYKKIATKH---VKTLIIKYEPCVLVISNRKLNIVPSFYDGEQDPAPKFFTPNVQNL 210
C+ + A KH VKT+ I +PC++ SN + P + G F N
Sbjct: 127 CVAAAIQAAQKHCALVKTVAIYDDPCIVRFSNLVFPVSPPYNKG-------MFVAWDDNN 179
Query: 211 LKRLTRPDFTKVF-RKRNNQGLHALKTPKYKFLTKEELELEIA 336
+ F F R N HA +F T EE L +A
Sbjct: 180 VSAAAAAAFDAAFARLANATAEHAAADSVRRFATGEEAALAVA 222
>11_04_0208 - 14871412-14872198,14872932-14873206,14873819-14873851
Length = 364
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 135 EHCTIILRWRTRPGSKVFYTKCTESIKEIDSARFY 239
EH T I+RW R G K+ + T IK + +R Y
Sbjct: 173 EHLTSIIRWVHRNGPKI--NRSTLRIKRMQFSRIY 205
>06_03_0032 -
15697530-15697669,15699215-15699437,15699823-15699929,
15700047-15700224,15700393-15700455,15700474-15700602,
15701211-15701430,15702162-15702262,15702954-15703062,
15705169-15705290,15705473-15705515,15705848-15705903,
15705983-15706089,15706167-15706342,15706507-15706618,
15706711-15706759,15707184-15707276,15707452-15707571,
15707686-15707787,15709442-15709540,15710103-15710237,
15710421-15710499,15710747-15710822,15710904-15710993,
15711139-15711217,15711304-15711338,15711457-15711531,
15712628-15713375
Length = 1221
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/72 (20%), Positives = 31/72 (43%)
Frame = +1
Query: 169 DPAPKFFTPNVQNLLKRLTRPDFTKVFRKRNNQGLHALKTPKYKFLTKEELELEIAKANE 348
D K F+ N+ LLK + + + G H K + + E+E+ A++
Sbjct: 411 DRGEKHFSSNLSTLLKWSPFTTEDDLLNQFGDMGCHGTKLIVFNLWFNDAWEMELDFASD 470
Query: 349 KADVLLHIPPVL 384
+ D+++ P +
Sbjct: 471 EEDIMISGAPAM 482
>03_04_0085 -
17182662-17182963,17183044-17183101,17183564-17183638,
17183730-17183864,17183986-17184165,17184315-17184365,
17184537-17184637,17185562-17185620,17185701-17185816,
17186668-17186853,17187337-17187399,17187440-17187521,
17188221-17188312,17189153-17189296,17190056-17190136,
17190815-17190898,17191465-17191566,17191922-17192017,
17192239-17192299,17192418-17192521
Length = 723
Score = 27.1 bits (57), Expect = 9.3
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +1
Query: 262 NQGLHALKTPKYKFLTKEELELEIAKANEKADVLLHIPPVLKIHKPIDEVLSRD--PALI 435
+ G +LKT F E + I K ++ ++ HI K K EVL R LI
Sbjct: 342 SMGKESLKTRSSVFALGERIN--ILKEIDQPALIPHIAEA-KSQKYPYEVLFRSLQKLLI 398
Query: 436 GYDTSKYLFTDITFG 480
TS+YLF+D FG
Sbjct: 399 DTATSEYLFSDDFFG 413
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,215,658
Number of Sequences: 37544
Number of extensions: 265123
Number of successful extensions: 521
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 521
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1166441080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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