Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0985
         (528 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC009296-1|AAH09296.1|  360|Homo sapiens mitochondrial ribosomal...    89   1e-17
AK075436-1|BAC11619.1|  218|Homo sapiens protein ( Homo sapiens ...    89   1e-17
AF321613-1|AAK01406.1|  360|Homo sapiens GIBT protein protein.         89   1e-17
AF226045-1|AAF86945.1|  360|Homo sapiens GK002 protein.                89   1e-17
AF063603-1|AAG43162.1|  168|Homo sapiens brain my045 protein pro...    76   9e-14

>BC009296-1|AAH09296.1|  360|Homo sapiens mitochondrial ribosomal
           protein S22 protein.
          Length = 360

 Score = 88.6 bits (210), Expect = 1e-17
 Identities = 46/117 (39%), Positives = 70/117 (59%)
 Frame = +1

Query: 178 PKFFTPNVQNLLKRLTRPDFTKVFRKRNNQGLHALKTPKYKFLTKEELELEIAKANEKAD 357
           P F    VQ++L ++T  +  K F+      +  LK P YK +T+ +LE    +A E A 
Sbjct: 68  PTFMDEEVQSILTKMTGLNLQKTFKP----AIQELKPPTYKLMTQAQLEEATRQAVEAAK 123

Query: 358 VLLHIPPVLKIHKPIDEVLSRDPALIGYDTSKYLFTDITFGIANEERIIIERDTDGT 528
           V L +PPVL+   PI++VL+ D  L G +T+KY+FTDI++ I + ER I+ R+  GT
Sbjct: 124 VRLKMPPVLEERVPINDVLAEDKILEGTETTKYVFTDISYSIPHRERFIVVREPSGT 180


>AK075436-1|BAC11619.1|  218|Homo sapiens protein ( Homo sapiens
           cDNA PSEC0127 fis, clone PLACE1003724, highly similar to
           Mitochondrial 28S ribosomal protein S22. ).
          Length = 218

 Score = 88.6 bits (210), Expect = 1e-17
 Identities = 46/117 (39%), Positives = 70/117 (59%)
 Frame = +1

Query: 178 PKFFTPNVQNLLKRLTRPDFTKVFRKRNNQGLHALKTPKYKFLTKEELELEIAKANEKAD 357
           P F    VQ++L ++T  +  K F+      +  LK P YK +T+ +LE    +A E A 
Sbjct: 68  PTFMDEEVQSILTKMTGLNLQKTFKP----AIQELKPPTYKLMTQAQLEEATRQAVEAAK 123

Query: 358 VLLHIPPVLKIHKPIDEVLSRDPALIGYDTSKYLFTDITFGIANEERIIIERDTDGT 528
           V L +PPVL+   PI++VL+ D  L G +T+KY+FTDI++ I + ER I+ R+  GT
Sbjct: 124 VRLKMPPVLEERVPINDVLAEDKILEGTETTKYVFTDISYSIPHRERFIVVREPSGT 180


>AF321613-1|AAK01406.1|  360|Homo sapiens GIBT protein protein.
          Length = 360

 Score = 88.6 bits (210), Expect = 1e-17
 Identities = 46/117 (39%), Positives = 70/117 (59%)
 Frame = +1

Query: 178 PKFFTPNVQNLLKRLTRPDFTKVFRKRNNQGLHALKTPKYKFLTKEELELEIAKANEKAD 357
           P F    VQ++L ++T  +  K F+      +  LK P YK +T+ +LE    +A E A 
Sbjct: 68  PTFMDEEVQSILTKMTGLNLQKTFKP----AIQELKPPTYKLMTQAQLEEATRQAVEAAK 123

Query: 358 VLLHIPPVLKIHKPIDEVLSRDPALIGYDTSKYLFTDITFGIANEERIIIERDTDGT 528
           V L +PPVL+   PI++VL+ D  L G +T+KY+FTDI++ I + ER I+ R+  GT
Sbjct: 124 VRLKMPPVLEERVPINDVLAEDKILEGTETTKYVFTDISYSIPHRERFIVVREPSGT 180


>AF226045-1|AAF86945.1|  360|Homo sapiens GK002 protein.
          Length = 360

 Score = 88.6 bits (210), Expect = 1e-17
 Identities = 46/117 (39%), Positives = 70/117 (59%)
 Frame = +1

Query: 178 PKFFTPNVQNLLKRLTRPDFTKVFRKRNNQGLHALKTPKYKFLTKEELELEIAKANEKAD 357
           P F    VQ++L ++T  +  K F+      +  LK P YK +T+ +LE    +A E A 
Sbjct: 68  PTFMDEEVQSILTKMTGLNLQKTFKP----AIQELKPPTYKLMTQAQLEEATRQAVEAAK 123

Query: 358 VLLHIPPVLKIHKPIDEVLSRDPALIGYDTSKYLFTDITFGIANEERIIIERDTDGT 528
           V L +PPVL+   PI++VL+ D  L G +T+KY+FTDI++ I + ER I+ R+  GT
Sbjct: 124 VRLKMPPVLEERVPINDVLAEDKILEGTETTKYVFTDISYSIPHRERFIVVREPSGT 180


>AF063603-1|AAG43162.1|  168|Homo sapiens brain my045 protein
           protein.
          Length = 168

 Score = 75.8 bits (178), Expect = 9e-14
 Identities = 40/102 (39%), Positives = 61/102 (59%)
 Frame = +1

Query: 178 PKFFTPNVQNLLKRLTRPDFTKVFRKRNNQGLHALKTPKYKFLTKEELELEIAKANEKAD 357
           P F    VQ++L ++T  +  K F+      +  LK P YK +T+ +LE    +A E A 
Sbjct: 67  PTFMDEEVQSILTKMTGLNLQKTFKP----AIQELKPPTYKLMTQAQLEEATRQAVEAAK 122

Query: 358 VLLHIPPVLKIHKPIDEVLSRDPALIGYDTSKYLFTDITFGI 483
           V L +PPVL+   PI++VL+ D  L G +T+KY+FTDI++ I
Sbjct: 123 VRLKMPPVLEERVPINDVLAEDKILEGTETTKYVFTDISYSI 164


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,126,769
Number of Sequences: 237096
Number of extensions: 1577653
Number of successful extensions: 2644
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2644
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5103531180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)