Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0983
(596 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_3504| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_4545| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.033
SB_13878| Best HMM Match : Vicilin_N (HMM E-Value=0.2) 35 0.043
SB_40028| Best HMM Match : Neur_chan_memb (HMM E-Value=2.2) 33 0.13
SB_57637| Best HMM Match : SRP40_C (HMM E-Value=2.3e-08) 32 0.40
SB_42264| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.40
SB_30841| Best HMM Match : HLH (HMM E-Value=1.5) 31 0.93
SB_14859| Best HMM Match : SEA (HMM E-Value=0.01) 31 0.93
SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0) 30 1.6
SB_23427| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13) 29 2.2
SB_43972| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_34777| Best HMM Match : VWA (HMM E-Value=0) 29 3.8
SB_57411| Best HMM Match : SRP14 (HMM E-Value=9.3) 28 5.0
SB_43004| Best HMM Match : FAD_binding_4 (HMM E-Value=1.4e-18) 28 5.0
SB_39222| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_32968| Best HMM Match : SRP40_C (HMM E-Value=0.013) 28 5.0
SB_20906| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_12255| Best HMM Match : Pkinase (HMM E-Value=0) 28 5.0
SB_42146| Best HMM Match : GYF (HMM E-Value=5.7e-15) 28 6.6
SB_20225| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_36215| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_3410| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_1179| Best HMM Match : IQ (HMM E-Value=1e-04) 27 8.7
SB_49430| Best HMM Match : Chorion_1 (HMM E-Value=3.2) 27 8.7
>SB_3504| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 164
Score = 53.2 bits (122), Expect = 2e-07
Identities = 20/34 (58%), Positives = 28/34 (82%)
Frame = +3
Query: 360 SYVLKLFDRSVDLSQFDEDSPLYPICRAWIANQP 461
SY+LKLFDRSVD + F+ED+PLY + + W+ N+P
Sbjct: 69 SYILKLFDRSVDFAPFNEDTPLYTLAKEWMENKP 102
>SB_4545| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 35.5 bits (78), Expect = 0.033
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Frame = +3
Query: 99 RKRRRIFTPIKNKGKSITQFPQISNKVKEVT--TARGRLQGALMEILEPALDSDDSTELT 272
R++RRI + I N G S + P + + K T AR + L+E + P++ D+S T
Sbjct: 256 RRKRRI-SKILNSGNSTKRVPWLDSLRKRETNGNARAMEKSELLE-MNPSVQHDESNVPT 313
Query: 273 PGKRRQSDQDETYVSEEEDIH 335
P K R S D T S E ++H
Sbjct: 314 PPKLRLSINDLT-GSHEGELH 333
>SB_13878| Best HMM Match : Vicilin_N (HMM E-Value=0.2)
Length = 611
Score = 35.1 bits (77), Expect = 0.043
Identities = 22/92 (23%), Positives = 46/92 (50%)
Frame = +3
Query: 78 QGAGLKMRKRRRIFTPIKNKGKSITQFPQISNKVKEVTTARGRLQGALMEILEPALDSDD 257
Q AG++ K + I T + K K+ ++ + NK KE+ T+R A E + +
Sbjct: 256 QEAGIRENKDKEIMTSRREKAKADAEYMRQENKDKEIMTSRREKAKADAEYMRQVV---- 311
Query: 258 STELTPGKRRQSDQDETYVSEEEDIHSQKQSQ 353
+ +L + R+++ D Y E + S+++++
Sbjct: 312 ADQLKLEREREAELDMLYRDEAARMWSKREAE 343
>SB_40028| Best HMM Match : Neur_chan_memb (HMM E-Value=2.2)
Length = 130
Score = 33.5 bits (73), Expect = 0.13
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +3
Query: 126 IKNKGKSITQFPQISNKVKEVTT--ARGRLQGALMEILEPALDSDDSTELTPGKRRQSDQ 299
I N G S + P + + K T AR + L+E + P++ D+S TP K R S
Sbjct: 30 ILNSGNSTKRVPWLDSLRKRETNGNARAMEKSELLE-MNPSVQHDESNVPTPPKPRLSIN 88
Query: 300 DETYVSEEEDIH 335
D T S EE++H
Sbjct: 89 DLT-GSHEEELH 99
>SB_57637| Best HMM Match : SRP40_C (HMM E-Value=2.3e-08)
Length = 654
Score = 31.9 bits (69), Expect = 0.40
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = +3
Query: 234 EPALDSDDSTELTPGKRRQSDQDETYVSEEEDIHSQKQSQRQSYVLKLFDRSVDLSQFDE 413
+P +DD + TP K+ S +D++ +EE+ +K ++ + S D S D+
Sbjct: 12 KPKKKADDKVKKTPAKQESSSEDDSSDDDEEEKSKKKAVSKEKKTPAKQESSSDDSSSDD 71
Query: 414 DS 419
S
Sbjct: 72 SS 73
>SB_42264| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 334
Score = 31.9 bits (69), Expect = 0.40
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Frame = +3
Query: 315 SEEEDIHSQKQSQRQSYVLKLFDRSVDLSQFDEDSPLYPICR--AWIANQPKADYSKFGY 488
++ ED+ ++ Q + + RS+DLSQ PL + + I N P AD S G
Sbjct: 127 NDAEDLSTESQGNKSDPATAVKVRSLDLSQRRHSDPLLYTSKLNSLIKNAPIADAS--GK 184
Query: 489 DQPEDNEDIMTIDLPGPEGPPVSRIPELLPEQ 584
+DN I + + G S+ ++ PE+
Sbjct: 185 AADKDNNAISFLPIDDNGGTAESQFRKVKPEK 216
>SB_30841| Best HMM Match : HLH (HMM E-Value=1.5)
Length = 189
Score = 30.7 bits (66), Expect = 0.93
Identities = 25/123 (20%), Positives = 52/123 (42%)
Frame = +3
Query: 120 TPIKNKGKSITQFPQISNKVKEVTTARGRLQGALMEILEPALDSDDSTELTPGKRRQSDQ 299
T + + ++ + ++SN+V + + +L+G + ++ LD D E R
Sbjct: 41 TADQERADAVDRLAEVSNQVNNLQQGKRKLEGQ-VNTMQEELD-DAENEAKAADERSKKA 98
Query: 300 DETYVSEEEDIHSQKQSQRQSYVLKLFDRSVDLSQFDEDSPLYPICRAWIANQPKADYSK 479
+ + ++ S + + +KL D +VDL P+ P A + N+P +
Sbjct: 99 AAEFARAQAELVSAQDHATAADRIKLID-TVDLEGGPVGKPVVP---AALMNRPTRGERR 154
Query: 480 FGY 488
F Y
Sbjct: 155 FAY 157
>SB_14859| Best HMM Match : SEA (HMM E-Value=0.01)
Length = 1776
Score = 30.7 bits (66), Expect = 0.93
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +3
Query: 252 DDSTELTPGKRRQSDQDETYVSEEEDIHSQKQSQRQSYVLKLFDR-SVDLSQFDEDSPLY 428
DD E + + ++ E ++ E D+H + + ++KL R +D SQ D PLY
Sbjct: 1464 DDYWEREQPEEQPQEEAEELIAPEPDVHEIARKPVEEPLIKLESRPPIDTSQDSIDDPLY 1523
>SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1323
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/108 (20%), Positives = 42/108 (38%)
Frame = +3
Query: 93 KMRKRRRIFTPIKNKGKSITQFPQISNKVKEVTTARGRLQGALMEILEPALDSDDSTELT 272
K RK++R ++ + + + KE + E + DS+ +
Sbjct: 117 KTRKKKRKHDSSEDSDDNSSDVSAKKKQCKEERKRKRHKLSCESSSCEESSDSEKRLKKE 176
Query: 273 PGKRRQSDQDETYVSEEEDIHSQKQSQRQSYVLKLFDRSVDLSQFDED 416
K +Q D E+ E+D +K+ ++ K D S LS ++D
Sbjct: 177 KNKEKQRDSSESSSDSEDDRKRRKKKVKKDKKQKAKDSSESLSDSEDD 224
>SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0)
Length = 3891
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -1
Query: 551 WRSLWPWQVYCHNILVVFRLIITKFAVISFRLVCNP 444
WR W W+ I V+FRL I V++ RL C P
Sbjct: 19 WRRRWAWK-----ISVIFRLQIVFTQVVTARLTCPP 49
>SB_23427| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 147
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 334 THKNNPSGSHMFSNCSIGVLTCHSLMRI 417
TH GS F+NCS ++ CHS + I
Sbjct: 45 THPQIDMGSDAFANCSSEIVYCHSRVEI 72
>SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13)
Length = 1463
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +3
Query: 204 RLQGALMEILEPALDSDDSTELTPGKRRQSDQDETYVSEEEDIHSQKQSQRQ 359
R +GA P+ D D PG RRQ Q + EED+H ++ S Q
Sbjct: 759 RFEGAPRGPKGPSFDQDRQRFEGPGNRRQEGQQGN--NPEEDVHMEEGSPPQ 808
>SB_43972| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 899
Score = 29.1 bits (62), Expect = 2.9
Identities = 26/103 (25%), Positives = 41/103 (39%), Gaps = 2/103 (1%)
Frame = +3
Query: 231 LEPALDSDDSTELTPGKRRQSDQDETYVSEEEDIHSQKQSQRQSYV--LKLFDRSVDLSQ 404
L+ +D D G RR S T SE+ H + ++R +YV + ++ Q
Sbjct: 250 LDLVVDDDTEPIHISGPRRISMASSTSESEKTPEHDNQGTERPAYVDERRRVTTAIPKEQ 309
Query: 405 FDEDSPLYPICRAWIANQPKADYSKFGYDQPEDNEDIMTIDLP 533
D + P Y + + K +YS Y P +I D P
Sbjct: 310 SDGNKPDYAV------REDKLEYSNQTYTDPGILREITPKDKP 346
>SB_34777| Best HMM Match : VWA (HMM E-Value=0)
Length = 1268
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +3
Query: 276 GKRRQSDQDETYVSEEEDIHSQKQSQRQSYVLKLFDRSVDLSQFDE 413
G+ + QD+++V +E+ HSQ Q Q + + +S +DE
Sbjct: 660 GQEQGQGQDQSHVQGQEEGHSQDQGQEGTNQVPQQGEKTPISTYDE 705
>SB_57411| Best HMM Match : SRP14 (HMM E-Value=9.3)
Length = 200
Score = 28.3 bits (60), Expect = 5.0
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Frame = +3
Query: 195 ARGRLQGALMEILEPALDSDDSTELTPGKRRQSDQDETYVSEEEDIHSQKQSQRQSYVLK 374
AR +L+GA+ + L + + + + K++ SD+D EED S K +QR+ +++
Sbjct: 23 ARRKLRGAIHATI---LATHNFSSGSRHKKKGSDEDSIATIIEEDTESTK-TQREQEIIR 78
Query: 375 LFDR---SVDLSQFDEDSPL 425
L + S+ FD S L
Sbjct: 79 LTQQLITSITAKDFDSYSKL 98
>SB_43004| Best HMM Match : FAD_binding_4 (HMM E-Value=1.4e-18)
Length = 1067
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = -3
Query: 450 QSRLCRSDREGNPHQTVTSQHSYRTV*EHMTAAGIVFVSEYLLLPIH 310
+ +L ++GNP +TS H R + A GI++ Y +P++
Sbjct: 519 KQKLIHGQQDGNPVD-MTSTHMLRAAIVGLGAMGIIYTLTYRCIPVY 564
>SB_39222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1651
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -1
Query: 593 GCLLFRQQLWYPRDWRSLWPWQ 528
G L Q L PRDW S W W+
Sbjct: 1628 GPLRSNQTLTSPRDWTSTWTWR 1649
>SB_32968| Best HMM Match : SRP40_C (HMM E-Value=0.013)
Length = 440
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = +3
Query: 234 EPALDSDDSTELTPGKRRQSDQDETYVSEEEDIHSQKQSQRQSYVLKLFDRSVDLSQFDE 413
+P +DD + TP K+ S +D++ EEE + + + K S D S D+
Sbjct: 224 KPKKKADDKVKKTPAKQESSSEDDSSNEEEEKPKKKADVKGKKTPAKQESSSGDDSSDDD 283
Query: 414 D 416
+
Sbjct: 284 E 284
>SB_20906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 171
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 258 SHQNPMPVPIFPLTLPAASLEQ 193
+HQ P+P P P T+P LEQ
Sbjct: 105 AHQQPVPSPPAPPTIPGPKLEQ 126
>SB_12255| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 476
Score = 28.3 bits (60), Expect = 5.0
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Frame = +3
Query: 195 ARGRLQGALMEILEPALDSDDSTELTPGKRRQSDQDETYVSEEEDIHSQKQSQRQSYVLK 374
AR +L+GA+ + L + + + + K++ SD+D EED S K +QR+ +++
Sbjct: 299 ARRKLRGAIHATI---LATHNFSSGSRHKKKGSDEDSIATIIEEDTESTK-TQREQEIIR 354
Query: 375 LFDR---SVDLSQFDEDSPL 425
L + S+ FD S L
Sbjct: 355 LTQQLITSITAKDFDSYSKL 374
>SB_42146| Best HMM Match : GYF (HMM E-Value=5.7e-15)
Length = 924
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +3
Query: 279 KRRQSDQDETYVSEEEDIHSQKQSQRQSYVLK 374
+RRQ ++ E E+E++ Q++ QRQ L+
Sbjct: 638 RRRQQEEAERQRREQEEVFKQQEQQRQQLELQ 669
>SB_20225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1548
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +1
Query: 307 PMYRKKKIFTHK-NNPSGSHMFSNCSIGVLTCHSLMRIPLSIRSAEPGLQT 456
P K+ + TH P S S CS+ LT ++ P+ I +EP L T
Sbjct: 1400 PQRYKQSLNTHPVRKPKLSGELSTCSLQSLTDNTTSERPIRISFSEPHLHT 1450
>SB_36215| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1427
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +3
Query: 18 RVHISFVLINYFSYFNFK*IQGAGLKMRKRRRIFTPIKNKGKSITQFPQISNK 176
R+H++ V N+F + + + G G+ +RR+F IK KGK F K
Sbjct: 28 RLHVTRV--NHFDHVTEEDLDGLGMAKPAQRRLFEAIK-KGKRRNLFGSFRRK 77
>SB_3410| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1256
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +1
Query: 241 HWILMTLLNLHQGKEDNQIKMKPMYRKKKIFTHKNNPSGSHMF 369
H++ ++ N+H+GKE+ K+ P Y + I T + +PS +
Sbjct: 538 HYLSDSVRNVHKGKEE-LAKLIPKYHEIMIKTIEQDPSSEKSY 579
>SB_1179| Best HMM Match : IQ (HMM E-Value=1e-04)
Length = 474
Score = 27.5 bits (58), Expect = 8.7
Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Frame = +3
Query: 141 KSITQFPQISNKVKEVTTARGRLQG----ALMEILEPALDSDDSTELTPGKRRQSDQDET 308
+S Q P S+ + ++ + R LQG AL EI++ + + K +++ +T
Sbjct: 153 RSFKQNPLTSDNLAKIQSDRKFLQGVVETALGEIVDHRSFNSLMNAVNTEKEKKAALQQT 212
Query: 309 YVSEEEDIHSQKQSQRQSYVLKLFDRSVDLSQFDE 413
+ EEE K QRQ +K ++ ++ Q +E
Sbjct: 213 ILKEEESRRLVKSLQRQLVEVKK-EKESEIQQRNE 246
>SB_49430| Best HMM Match : Chorion_1 (HMM E-Value=3.2)
Length = 273
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -1
Query: 596 VGCLLFRQQLWYPRDWRSLWPWQVYCHN 513
V C Q LWYPR +L+ + HN
Sbjct: 42 VSCRHEAQSLWYPRQEEALYQQHYFFHN 69
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,592,713
Number of Sequences: 59808
Number of extensions: 396507
Number of successful extensions: 1316
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1315
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1439498375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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