Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0983
(596 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g10320.1 68414.m01162 U2 snRNP auxiliary factor-related simil... 31 0.44
At5g57120.1 68418.m07132 expressed protein weak similarity to SP... 30 1.0
At4g14510.1 68417.m02236 expressed protein contains Pfam domain,... 30 1.0
At3g57910.1 68416.m06455 D111/G-patch domain-containing protein ... 30 1.3
At3g07120.1 68416.m00848 zinc finger (C3HC4-type RING finger) fa... 30 1.3
At2g19710.1 68415.m02303 expressed protein contains Pfam profi... 30 1.3
At3g47910.1 68416.m05224 expressed protein low similarity to non... 29 2.4
At3g04990.1 68416.m00542 hypothetical protein 29 2.4
At5g42560.1 68418.m05180 abscisic acid-responsive HVA22 family p... 29 3.1
At5g28530.1 68418.m03478 far-red impaired responsive protein, pu... 29 3.1
At2g36020.1 68415.m04423 abscisic acid-responsive HVA22 family p... 28 4.1
At1g58310.1 68414.m06633 F-box family protein contains F-box dom... 28 4.1
At4g02390.1 68417.m00323 poly (ADP-ribose) polymerase / NAD(+) A... 28 5.4
At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family pro... 28 5.4
At1g75700.1 68414.m08794 abscisic acid-responsive HVA22 family p... 28 5.4
At5g53840.1 68418.m06690 F-box family protein (FBL13) contains F... 27 7.2
At5g40450.1 68418.m04905 expressed protein 27 7.2
At5g09480.1 68418.m01097 hydroxyproline-rich glycoprotein family... 27 7.2
At5g01030.2 68418.m00006 expressed protein 27 7.2
At5g01030.1 68418.m00005 expressed protein 27 7.2
At5g63720.1 68418.m07998 hypothetical protein 27 9.5
At5g41020.1 68418.m04986 myb family transcription factor contain... 27 9.5
At3g30640.1 68416.m03878 Ulp1 protease family protein contains P... 27 9.5
At1g68140.1 68414.m07783 expressed protein 27 9.5
At1g09600.1 68414.m01077 protein kinase family protein contains ... 27 9.5
>At1g10320.1 68414.m01162 U2 snRNP auxiliary factor-related similar
to U2 small nuclear ribonucleoprotein auxiliary factor
35 kD subunit related protein 1 (sp|Q15695)
Length = 757
Score = 31.5 bits (68), Expect = 0.44
Identities = 20/86 (23%), Positives = 36/86 (41%)
Frame = +3
Query: 255 DSTELTPGKRRQSDQDETYVSEEEDIHSQKQSQRQSYVLKLFDRSVDLSQFDEDSPLYPI 434
D + K R Y EE+ S+ ++S + + S Q D+D
Sbjct: 631 DKSHRERSKHRHERSSSRYSHEEDSTESRHHQHKESDKKRSVETSPVGYQSDKDRDRSKQ 690
Query: 435 CRAWIANQPKADYSKFGYDQPEDNED 512
+ + ++ P++D S+ G Q E+N D
Sbjct: 691 RQRYKSDDPESDQSRKGKRQSEENSD 716
>At5g57120.1 68418.m07132 expressed protein weak similarity to
SP|Q14978 Nucleolar phosphoprotein p130 {Homo sapiens}
Length = 330
Score = 30.3 bits (65), Expect = 1.0
Identities = 12/45 (26%), Positives = 27/45 (60%)
Frame = +3
Query: 240 ALDSDDSTELTPGKRRQSDQDETYVSEEEDIHSQKQSQRQSYVLK 374
++++DD E KR++S+ +ET E+D K+ +++ V++
Sbjct: 163 SVEADDDKEKVSKKRKRSEPEETKEETEDDDEESKRRKKEENVVE 207
>At4g14510.1 68417.m02236 expressed protein contains Pfam domain,
PF04581: Protein of unknown function (DUF578)
Length = 932
Score = 30.3 bits (65), Expect = 1.0
Identities = 23/80 (28%), Positives = 40/80 (50%)
Frame = +3
Query: 90 LKMRKRRRIFTPIKNKGKSITQFPQISNKVKEVTTARGRLQGALMEILEPALDSDDSTEL 269
L+++KR + IK+ T+ Q+ ++++V + + L + L+ A SD+ TE
Sbjct: 803 LELQKREAL---IKHIEAIQTRSEQLRAEIEQVELVKDKGDETLYDKLDMAYSSDEETEE 859
Query: 270 TPGKRRQSDQDETYVSEEED 329
T G+ D TY E ED
Sbjct: 860 TDGEEDDVYLD-TYEDEGED 878
>At3g57910.1 68416.m06455 D111/G-patch domain-containing protein
contains Pfam profile PF01585: G-patch domain
Length = 265
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 240 ALDSDDSTELTPGKRRQSDQDETYVSEEEDIHSQKQSQRQSYVLKL 377
ALD ++ E+ P K+ + D+D EEE+ + Q ++KL
Sbjct: 188 ALDQLENVEVVPEKKNEEDEDGKPDEEEEEEEEITEEDLQEILMKL 233
>At3g07120.1 68416.m00848 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 Zinc
finger, C3HC4 type (RING finger)
Length = 360
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/60 (28%), Positives = 35/60 (58%)
Frame = +3
Query: 168 SNKVKEVTTARGRLQGALMEILEPALDSDDSTELTPGKRRQSDQDETYVSEEEDIHSQKQ 347
+ ++K + + + +LM++LE ++D LT G R D+DE Y +EED +++++
Sbjct: 244 TEEMKSSSASEPKQTMSLMDLLE---ETDRQMGLT-GSRYAMDEDEEYEEDEEDENNEEE 299
>At2g19710.1 68415.m02303 expressed protein contains Pfam profile:
PF03398 eukaryotic protein of unknown function, DUF292
Length = 937
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +3
Query: 276 GKRRQSDQDET--YVSEEEDIHSQKQSQRQS 362
G+ +Q QDET V ED+H +KQS R S
Sbjct: 429 GREKQPSQDETDINVGYSEDVHLRKQSSRVS 459
>At3g47910.1 68416.m05224 expressed protein low similarity to
nonmuscle myosin heavy chain (NMHC) [Homo sapiens]
GI:189036; contains Pfam profiles PF04780: Protein of
unknown function (DUF629), PF04781: Protein of unknown
function (DUF627)
Length = 1290
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 441 AWIANQPKADYSKFGYDQPEDNEDI-MTIDLPGPEGPPVSRIPE 569
AW P D G+++ E E++ ++I P P+G P+S PE
Sbjct: 479 AWNDTTPDGDTCN-GWNENESEEEVKLSIAFPPPDGWPISDDPE 521
>At3g04990.1 68416.m00542 hypothetical protein
Length = 227
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +3
Query: 162 QISNKVKEVTTARGRLQGALMEILEPA--LDSDDSTELTPGKRRQSDQDETYVSE 320
+I K KE+ + +++ ++++ + +D D +TEL+P K + + TYV E
Sbjct: 171 EIEEKGKELDLVKSQVKAWERKLIQLSKLVDDDCTTELSPRKDQVDSSNNTYVKE 225
>At5g42560.1 68418.m05180 abscisic acid-responsive HVA22 family
protein weak similarity to SP|Q00765 Polyposis locus
protein 1 (TB2 protein) {Homo sapiens}; contains Pfam
profile PF03134: TB2/DP1, HVA22 family
Length = 296
Score = 28.7 bits (61), Expect = 3.1
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +1
Query: 226 KYWNRHWILMTLLNLHQGKEDNQIKMKPMYRKKKI 330
++W ++WIL+ L + + D + PMY + K+
Sbjct: 38 RFWCQYWILVACLTVFERVGDAFVSWVPMYSEAKL 72
>At5g28530.1 68418.m03478 far-red impaired responsive protein,
putative similar to far-red impaired response protein
FAR1 [Arabidopsis thaliana] gi|5764395|gb|AAD51282;
contains Pfam:PF03101 domain: FAR1 family
Length = 685
Score = 28.7 bits (61), Expect = 3.1
Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = +1
Query: 241 HWILMTLLNLHQGK--EDNQIKMKPMYRK 321
HW + N+H + ED+Q+++ P YRK
Sbjct: 145 HWYVSQFSNVHNHELLEDDQVRLLPAYRK 173
>At2g36020.1 68415.m04423 abscisic acid-responsive HVA22 family
protein weak similarity to SP|Q00765 Polyposis locus
protein 1 (TB2 protein) {Homo sapiens}; contains Pfam
profile PF03134: TB2/DP1, HVA22 family
Length = 258
Score = 28.3 bits (60), Expect = 4.1
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +1
Query: 226 KYWNRHWILMTLLNLHQGKEDNQIKMKPMYRKKKI 330
++W ++WIL+ L++ + D I P+Y + K+
Sbjct: 38 RFWCQYWILLALISSFERVGDFFISWLPLYGEMKV 72
>At1g58310.1 68414.m06633 F-box family protein contains F-box domain
Pfam:PF00646
Length = 505
Score = 28.3 bits (60), Expect = 4.1
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Frame = +3
Query: 237 PALDSDDSTELTPGKRRQSDQDETY---VSEEEDIHSQKQSQRQSYVLKLFDRS 389
P LD DDS L GKR + E Y ++E D S VL+L D S
Sbjct: 48 PNLDFDDSVHLRLGKRNPAVSGEDYLKMINERSDQLSTSFMDFVDQVLRLQDNS 101
>At4g02390.1 68417.m00323 poly (ADP-ribose) polymerase / NAD(+)
ADP-ribosyltransferase / poly[ADP-ribose] synthetase
(APP) identical to SP|Q11207 Poly [ADP-ribose]
polymerase (EC 2.4.2.30) (PARP) (ADPRT) (NAD(+) ADP-
ribosyltransferase) (Poly[ADP-ribose] synthetase)
{Arabidopsis thaliana}
Length = 637
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +3
Query: 207 LQGALMEILEPALDSDDSTELTPGKRRQSDQDETYVSEE 323
++ L+E LE A+ D E + KR+++ ++TY S +
Sbjct: 24 VKAVLVERLEEAIAEDTKKEESKSKRKRNSSNDTYESNK 62
>At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family
protein low similarity to ubiquitin-conjugating
BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831,
ubiquitin-conjugating enzyme [Mus musculus] GI:3319990;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 1102
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/57 (22%), Positives = 30/57 (52%)
Frame = +3
Query: 198 RGRLQGALMEILEPALDSDDSTELTPGKRRQSDQDETYVSEEEDIHSQKQSQRQSYV 368
+ + G++ + E A DSD ++++ + D DE ++ED+ K++ ++ V
Sbjct: 44 KNKKTGSVGVVSEVAGDSDSDSDISD-EEEDDDDDEDNDDDDEDVEEGKKASEENVV 99
>At1g75700.1 68414.m08794 abscisic acid-responsive HVA22 family
protein weak similarity to SP|Q00765 Polyposis locus
protein 1 (TB2 protein) {Homo sapiens}; contains Pfam
profile PF03134: TB2/DP1, HVA22 family
Length = 166
Score = 27.9 bits (59), Expect = 5.4
Identities = 9/35 (25%), Positives = 20/35 (57%)
Frame = +1
Query: 226 KYWNRHWILMTLLNLHQGKEDNQIKMKPMYRKKKI 330
++W ++WI++ L + + D + PMY + K+
Sbjct: 27 QFWCQYWIIVAALTIFERIGDALVSWLPMYSEAKL 61
>At5g53840.1 68418.m06690 F-box family protein (FBL13) contains
F-box domain PF:00646
Length = 444
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +1
Query: 361 HMFSNCSIGVLTCHSLMRIPLSIRSAEPGLQTNLKLIT-ANLVMINLKTTRIL 516
H + I V TC IPLS+ + + + L +T N+ ++L +IL
Sbjct: 115 HRIQHIDISVFTCSGFGVIPLSLYTCDTLVHLKLSRVTMVNVEFVSLPCLKIL 167
>At5g40450.1 68418.m04905 expressed protein
Length = 2910
Score = 27.5 bits (58), Expect = 7.2
Identities = 24/103 (23%), Positives = 44/103 (42%), Gaps = 2/103 (1%)
Frame = +3
Query: 129 KNKGKSITQFPQISNKVKEVTTARGRLQGALMEILEPAL--DSDDSTELTPGKRRQSDQD 302
+ K + + P+ + K E T + G P+L D DD T + + +
Sbjct: 2037 ETKDEKSQEIPETA-KATETTIDQTLPIGTSQADQTPSLVSDKDDQTPKQVEEILEEETK 2095
Query: 303 ETYVSEEEDIHSQKQSQRQSYVLKLFDRSVDLSQFDEDSPLYP 431
ET+ + EDI S + ++S++ + V + ED P+ P
Sbjct: 2096 ETHKVQAEDIFSTETVPKESFI----EAPVSMLASGEDEPVTP 2134
>At5g09480.1 68418.m01097 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965; Common family members At5g09530,
At5g09520, At1g44222 [Arabidopsis thaliana]
Length = 144
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 486 YDQPEDNEDIMTIDLPGPEGPPVSRIPELLPEQ 584
Y +PE+ E +LP PE P + PE +PE+
Sbjct: 49 YTEPEEPEVPEEPELPSPEEPEIPEEPE-IPEE 80
>At5g01030.2 68418.m00006 expressed protein
Length = 744
Score = 27.5 bits (58), Expect = 7.2
Identities = 19/77 (24%), Positives = 31/77 (40%)
Frame = +3
Query: 162 QISNKVKEVTTARGRLQGALMEILEPALDSDDSTELTPGKRRQSDQDETYVSEEEDIHSQ 341
Q SN + T R R+ L L+P L S + P K R S + ++
Sbjct: 407 QSSNPENQNTHCRSRVS-PLRRFLDPLLKPKASESVLPSKARSSSSNPKPITNSNVPLQD 465
Query: 342 KQSQRQSYVLKLFDRSV 392
++ Q S L +F ++
Sbjct: 466 EKKQDASRTLAIFQLTI 482
>At5g01030.1 68418.m00005 expressed protein
Length = 744
Score = 27.5 bits (58), Expect = 7.2
Identities = 19/77 (24%), Positives = 31/77 (40%)
Frame = +3
Query: 162 QISNKVKEVTTARGRLQGALMEILEPALDSDDSTELTPGKRRQSDQDETYVSEEEDIHSQ 341
Q SN + T R R+ L L+P L S + P K R S + ++
Sbjct: 407 QSSNPENQNTHCRSRVS-PLRRFLDPLLKPKASESVLPSKARSSSSNPKPITNSNVPLQD 465
Query: 342 KQSQRQSYVLKLFDRSV 392
++ Q S L +F ++
Sbjct: 466 EKKQDASRTLAIFQLTI 482
>At5g63720.1 68418.m07998 hypothetical protein
Length = 492
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +1
Query: 271 HQGKEDNQIKMKPMYRKKKIFTHKNNPSGSH 363
H+ +E ++ + +PM K + THK G H
Sbjct: 398 HKHQEKSKERKRPMSESKGLTTHKQQHQGGH 428
>At5g41020.1 68418.m04986 myb family transcription factor contains
Pfam profile: PF00249 Myb DNA binding domain
Length = 588
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Frame = +3
Query: 234 EPALDSD------DSTELTPGKRRQSDQDETYVSEEEDIHSQKQSQRQSYVLKLFDRSVD 395
+P++DSD DST KR++ Q E +EE ++S K ++++ K +S +
Sbjct: 192 KPSVDSDVEDINLDSTNDGKKKRKKKKQSEDSETEENGLNSTKDAKKRRKKKKKKKQS-E 250
Query: 396 LSQFDEDS 419
+S+ +E S
Sbjct: 251 VSEAEEKS 258
>At3g30640.1 68416.m03878 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 661
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +3
Query: 246 DSDDSTELTPGKRRQSDQDETYVSEEEDIHSQKQSQRQSYVLK 374
D D TP K+++ E S E+D +K+++++ +K
Sbjct: 54 DKDADVSETPAKKQKVSHSEGVHSREKDAQKKKKNKKKEVAVK 96
>At1g68140.1 68414.m07783 expressed protein
Length = 334
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 246 DSDDSTELTPGKRRQSDQDETYVSEEEDIHSQKQS 350
DS+DST + G + +E EEE+ HS S
Sbjct: 266 DSNDSTTINRGTSELNFSEEEEEEEEEERHSNSNS 300
>At1g09600.1 68414.m01077 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 714
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/73 (27%), Positives = 33/73 (45%)
Frame = +1
Query: 235 NRHWILMTLLNLHQGKEDNQIKMKPMYRKKKIFTHKNNPSGSHMFSNCSIGVLTCHSLMR 414
N+ L L+ + K+D K + RK + P+G + +N +IG L + R
Sbjct: 65 NKEASLTLLIPIDAKKDDESEKKVNLERKSSRLVFQRRPTGIEVGAN-NIGTLQQPKMTR 123
Query: 415 IPLSIRSAEPGLQ 453
I S+ + E G Q
Sbjct: 124 I-CSVSNGERGAQ 135
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,031,392
Number of Sequences: 28952
Number of extensions: 271377
Number of successful extensions: 947
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 947
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1190791976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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