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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0982
         (575 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U43283-1|AAC69025.1|  412|Caenorhabditis elegans Hypothetical pr...   126   1e-29
U42838-2|AAB52493.1|  417|Caenorhabditis elegans Hypothetical pr...   119   2e-27
U29377-4|AAA68712.1|  412|Caenorhabditis elegans Hypothetical pr...   116   1e-26
AC006625-5|AAK68275.1|  427|Caenorhabditis elegans Acyl coa dehy...    61   5e-10
AF039038-2|AAK21433.1|  419|Caenorhabditis elegans Hypothetical ...    56   2e-08
AF127558-1|AAD21088.1|  419|Caenorhabditis elegans isovaleryl-Co...    52   3e-07
AF038605-3|AAB92016.1|  419|Caenorhabditis elegans Hypothetical ...    52   3e-07
Z66513-4|CAA91333.1|  409|Caenorhabditis elegans Hypothetical pr...    39   0.002
U28943-3|AAT81203.1|  408|Caenorhabditis elegans Hypothetical pr...    38   0.004
U28943-2|AAA68357.1|  613|Caenorhabditis elegans Hypothetical pr...    38   0.004
AC006632-9|AAK85472.1|  409|Caenorhabditis elegans Hypothetical ...    37   0.009
U97403-10|AAB52476.3|  319|Caenorhabditis elegans Hypothetical p...    37   0.012
L16622-6|AAA27913.2|  408|Caenorhabditis elegans Hypothetical pr...    36   0.016
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist...    33   0.15 
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele...    33   0.15 
Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical pr...    31   0.78 
Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical pr...    31   0.78 
Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical pr...    31   0.78 
Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical pr...    31   0.78 
Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical pr...    31   0.78 
Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical pr...    31   0.78 
Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical pr...    31   0.78 
Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical pr...    31   0.78 
Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical pr...    31   0.78 
DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein.      31   0.78 
Z99710-5|CAB16866.1|  662|Caenorhabditis elegans Hypothetical pr...    29   1.8  
Z99710-4|CAB16865.1|  660|Caenorhabditis elegans Hypothetical pr...    29   2.4  
AL117203-5|CAB55107.1|  291|Caenorhabditis elegans Hypothetical ...    28   4.1  
U41032-4|AAO44918.2| 1130|Caenorhabditis elegans Protein kinase ...    28   5.5  
U41032-3|AAO44917.1| 1237|Caenorhabditis elegans Protein kinase ...    28   5.5  
U23179-2|AAK68207.1|  345|Caenorhabditis elegans Serpentine rece...    28   5.5  
Z30215-6|CAF31477.2| 1144|Caenorhabditis elegans Hypothetical pr...    27   9.5  

>U43283-1|AAC69025.1|  412|Caenorhabditis elegans Hypothetical
           protein T25G12.5 protein.
          Length = 412

 Score =  126 bits (303), Expect = 1e-29
 Identities = 58/132 (43%), Positives = 82/132 (62%)
 Frame = +1

Query: 178 TTGFCFELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPE 357
           +TG  F+LT +Q   +   RKF  DE+IPVAG+YDKT EYPW ++KKA   G +   IPE
Sbjct: 21  STGMDFQLTADQAEFRANVRKFVADEVIPVAGEYDKTMEYPWEIIKKAHAQGYLIADIPE 80

Query: 358 HCGGIGNFGVFEECIVADELAFXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLIDE 537
             GG+G   +   CI+++E+A+             L  TP+I+  N + +K++LGR+ID 
Sbjct: 81  AYGGLG-VDMVSNCIISEEMAYGCSGIATAIMANDLALTPLILCANDDIKKRFLGRMIDN 139

Query: 538 PLVAAYGVTEPG 573
           P VA+Y VTEPG
Sbjct: 140 PFVASYAVTEPG 151


>U42838-2|AAB52493.1|  417|Caenorhabditis elegans Hypothetical
           protein T08G2.3 protein.
          Length = 417

 Score =  119 bits (286), Expect = 2e-27
 Identities = 54/127 (42%), Positives = 83/127 (65%)
 Frame = +1

Query: 193 FELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGI 372
           F+L++ QK +Q+ A KF+KD ++P A ++D++GE+PW +V++A  +GLMN  IPE  GG 
Sbjct: 29  FDLSETQKEIQDAALKFSKDVLVPNAAKFDESGEFPWEIVRQAHSLGLMNPQIPEKYGGP 88

Query: 373 GNFGVFEECIVADELAFXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLIDEPLVAA 552
           G     E  ++ + L++            SL   P+ I+GN+EQ+KKYLG L  EP++A+
Sbjct: 89  G-MTTLETALIVEALSYGCTGIQLGIMGPSLAIAPVYISGNEEQKKKYLGALAAEPIIAS 147

Query: 553 YGVTEPG 573
           Y VTEPG
Sbjct: 148 YCVTEPG 154


>U29377-4|AAA68712.1|  412|Caenorhabditis elegans Hypothetical
           protein K05F1.3 protein.
          Length = 412

 Score =  116 bits (279), Expect = 1e-26
 Identities = 55/127 (43%), Positives = 80/127 (62%)
 Frame = +1

Query: 193 FELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGI 372
           FEL+D QK +Q  A KF+KD ++P A ++DK+GE+PW +VK+A  +G MN  IPE  GG 
Sbjct: 23  FELSDTQKEIQSHAIKFSKDVLVPNAAKFDKSGEFPWEIVKQAHSLGFMNTIIPEKYGGP 82

Query: 373 GNFGVFEECIVADELAFXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLIDEPLVAA 552
           G     +  ++ + L++            SL   PI ++G +EQ+KKYLG L  EP++A+
Sbjct: 83  G-LSNLDTALIVEALSYGCSGLQIAIFGPSLAAAPICLSGTEEQKKKYLGMLAAEPIIAS 141

Query: 553 YGVTEPG 573
           Y VTEPG
Sbjct: 142 YCVTEPG 148


>AC006625-5|AAK68275.1|  427|Caenorhabditis elegans Acyl coa
           dehydrogenase protein1, isoform a protein.
          Length = 427

 Score = 61.3 bits (142), Expect = 5e-10
 Identities = 42/126 (33%), Positives = 64/126 (50%), Gaps = 1/126 (0%)
 Frame = +1

Query: 199 LTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGIGN 378
           LT+ +    +  RKF+KD + P+  + DK  +    V +  +E GLM  H+PE  GG G+
Sbjct: 48  LTENELFFADTVRKFSKDVVKPLVREMDKYSKMSPIVTQGVFENGLMGVHVPEEYGGSGS 107

Query: 379 FGVFEECIVADELA-FXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLIDEPLVAAY 555
              F   IV +ELA              +L  + II  G +EQ+ KYL RL  + L A++
Sbjct: 108 -SFFNAMIVIEELAKTDPSVSAMVGIHNTLPVSMIIDYGTEEQKLKYLPRLCSDSL-ASF 165

Query: 556 GVTEPG 573
            ++E G
Sbjct: 166 CISESG 171


>AF039038-2|AAK21433.1|  419|Caenorhabditis elegans Hypothetical
           protein K06A5.6 protein.
          Length = 419

 Score = 55.6 bits (128), Expect = 2e-08
 Identities = 35/127 (27%), Positives = 65/127 (51%), Gaps = 1/127 (0%)
 Frame = +1

Query: 196 ELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGIG 375
           +L++E+ ++    R+F  + I P+  + D   +    V+   +E GLM   IPE  GG G
Sbjct: 39  QLSEEESSIVGTVRRFAVNVIKPLVREMDDKSQMHQSVITGTFENGLMGIEIPEKYGGPG 98

Query: 376 NFGVFEECIVADELAFXXXXXXXXXXXXSLGQTPIII-AGNKEQQKKYLGRLIDEPLVAA 552
           +   F+  +V +ELA             +    P+II  G +EQ++KYL +++ E  + +
Sbjct: 99  S-SFFDAVLVIEELAKVDPSVSVFVDVQNTLVAPLIIQLGTEEQKQKYLPKIVTE-AIGS 156

Query: 553 YGVTEPG 573
           + ++E G
Sbjct: 157 FALSETG 163


>AF127558-1|AAD21088.1|  419|Caenorhabditis elegans isovaleryl-CoA
           dehydrogenase precursorprotein.
          Length = 419

 Score = 52.0 bits (119), Expect = 3e-07
 Identities = 41/134 (30%), Positives = 60/134 (44%), Gaps = 3/134 (2%)
 Frame = +1

Query: 175 PTTGFCFELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPW--PVVKKAWEVGLMNGH 348
           P     F L DE+ AL++  R+F   E+ P A + DK   +    P  KK  + GL+   
Sbjct: 31  PIDDSMFGLNDEEIALRQSIRQFADKELAPYADKIDKDNGWDQLRPFWKKLGDQGLLGIT 90

Query: 349 IPEHCGGIGNFGVFEECIVADELAFXXXXXXXXXXXXS-LGQTPIIIAGNKEQQKKYLGR 525
            P   GG G    F   I  +EL+             S L    I+  G++EQ+KKYL +
Sbjct: 91  APAEYGGSG-MNYFSHVIAMEELSRAAGGIALSYGAHSNLCINQIVRNGSEEQRKKYLPK 149

Query: 526 LIDEPLVAAYGVTE 567
           LI    + A  ++E
Sbjct: 150 LISGEHMGALAMSE 163


>AF038605-3|AAB92016.1|  419|Caenorhabditis elegans Hypothetical
           protein C02B10.1 protein.
          Length = 419

 Score = 52.0 bits (119), Expect = 3e-07
 Identities = 41/134 (30%), Positives = 60/134 (44%), Gaps = 3/134 (2%)
 Frame = +1

Query: 175 PTTGFCFELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPW--PVVKKAWEVGLMNGH 348
           P     F L DE+ AL++  R+F   E+ P A + DK   +    P  KK  + GL+   
Sbjct: 31  PIDDSMFGLNDEEIALRQSIRQFADKELAPYADKIDKDNGWDQLRPFWKKLGDQGLLGIT 90

Query: 349 IPEHCGGIGNFGVFEECIVADELAFXXXXXXXXXXXXS-LGQTPIIIAGNKEQQKKYLGR 525
            P   GG G    F   I  +EL+             S L    I+  G++EQ+KKYL +
Sbjct: 91  APAEYGGSG-MNYFSHVIAMEELSRAAGGIALSYGAHSNLCINQIVRNGSEEQRKKYLPK 149

Query: 526 LIDEPLVAAYGVTE 567
           LI    + A  ++E
Sbjct: 150 LISGEHMGALAMSE 163


>Z66513-4|CAA91333.1|  409|Caenorhabditis elegans Hypothetical
           protein F54D5.7 protein.
          Length = 409

 Score = 39.1 bits (87), Expect = 0.002
 Identities = 27/127 (21%), Positives = 61/127 (48%), Gaps = 2/127 (1%)
 Frame = +1

Query: 196 ELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEH-CGGI 372
           +LT+++++L   AR++ ++ ++P   +  +T ++   ++ +   +GL+      + C G 
Sbjct: 31  QLTEDERSLMLSAREYCQERLLPRVTEAYRTEKFDPSLIPEMGSMGLLGAPYQGYGCAGT 90

Query: 373 GNFGVFEECIVADELA-FXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLIDEPLVA 549
              G     ++A E+               SL   PI   G+++Q++KY+  L     + 
Sbjct: 91  STVGYG---LIAREVERVDSGYRSTMSVQTSLVIGPIYNYGSEDQKQKYIPDLASGKKIG 147

Query: 550 AYGVTEP 570
            +G+TEP
Sbjct: 148 CFGLTEP 154


>U28943-3|AAT81203.1|  408|Caenorhabditis elegans Hypothetical
           protein E04F6.5b protein.
          Length = 408

 Score = 38.3 bits (85), Expect = 0.004
 Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 3/127 (2%)
 Frame = +1

Query: 199 LTDEQKALQELARKFTKDEIIPVAG--QYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGI 372
           +TDEQK    +     +  ++ V    + D+T + P  V+ +  E+G     +P    G 
Sbjct: 63  MTDEQKETLGMVMSPLEKMLVEVNDVVKNDETSDIPRAVLDQFAELGTFGVLVPPELEGS 122

Query: 373 GNFGVFEECIVADEL-AFXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLIDEPLVA 549
           G F   +   VA+ + A+            S+G   I++ G   Q++KYL  L      A
Sbjct: 123 G-FNNSQMARVAEIVGAYDLGFGVVMGAHQSIGYKGILLEGTDAQKQKYLPDLATGRKFA 181

Query: 550 AYGVTEP 570
           A+ +TEP
Sbjct: 182 AFALTEP 188


>U28943-2|AAA68357.1|  613|Caenorhabditis elegans Hypothetical
           protein E04F6.5a protein.
          Length = 613

 Score = 38.3 bits (85), Expect = 0.004
 Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 3/127 (2%)
 Frame = +1

Query: 199 LTDEQKALQELARKFTKDEIIPVAG--QYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGI 372
           +TDEQK    +     +  ++ V    + D+T + P  V+ +  E+G     +P    G 
Sbjct: 63  MTDEQKETLGMVMSPLEKMLVEVNDVVKNDETSDIPRAVLDQFAELGTFGVLVPPELEGS 122

Query: 373 GNFGVFEECIVADEL-AFXXXXXXXXXXXXSLGQTPIIIAGNKEQQKKYLGRLIDEPLVA 549
           G F   +   VA+ + A+            S+G   I++ G   Q++KYL  L      A
Sbjct: 123 G-FNNSQMARVAEIVGAYDLGFGVVMGAHQSIGYKGILLEGTDAQKQKYLPDLATGRKFA 181

Query: 550 AYGVTEP 570
           A+ +TEP
Sbjct: 182 AFALTEP 188


>AC006632-9|AAK85472.1|  409|Caenorhabditis elegans Hypothetical
           protein F28A10.6 protein.
          Length = 409

 Score = 37.1 bits (82), Expect = 0.009
 Identities = 19/50 (38%), Positives = 26/50 (52%)
 Frame = +1

Query: 226 ELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGIG 375
           E A +F K E+ P    +DK GE P  V++KA E+G    +     GG G
Sbjct: 36  EAAHQFAKKEMYPKMADWDKQGELPMDVLRKAGEMGFGAIYCSGDHGGSG 85


>U97403-10|AAB52476.3|  319|Caenorhabditis elegans Hypothetical
           protein T10E9.9 protein.
          Length = 319

 Score = 36.7 bits (81), Expect = 0.012
 Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
 Frame = +1

Query: 280 DKTGEYPWPVVKKAWEVGLMNGHIPEHCGGIGNFGVFEECIVADELAFXXXXXXXXXXXX 459
           D+T E    V+   +E GLM   +PE  GG G    F+  +V +E++             
Sbjct: 2   DRTSEMTPAVINGCFENGLMGIEVPEKYGGPG-ATFFDAALVIEEISKVDASVGAMVDVH 60

Query: 460 SLGQTPIII-AGNKEQQKKYLGRLIDEPLVAAYGVTEPG 573
           +    P+II  G ++Q++KYL +      V ++ ++E G
Sbjct: 61  NTLFIPLIIELGTEKQKEKYLPKCYTSS-VGSFALSETG 98


>L16622-6|AAA27913.2|  408|Caenorhabditis elegans Hypothetical
           protein C02D5.1 protein.
          Length = 408

 Score = 36.3 bits (80), Expect = 0.016
 Identities = 31/120 (25%), Positives = 50/120 (41%), Gaps = 2/120 (1%)
 Frame = +1

Query: 217 ALQELARKFTKDEIIPVAGQYDKTGEYPWP-VVKKAWEVGLMNGHIPEHCGGIGNFGVFE 393
           A+Q    K  K++I P   Q++K+G YP   V K   ++G+   + P   GG G      
Sbjct: 31  AMQNSLAKLIKEKINPNVAQWEKSGRYPAHFVFKMLGQLGVFAVNKPVDYGGTGRDFAMS 90

Query: 394 ECIVADELAFXXXXXXXXXXXXSLGQTPIIIA-GNKEQQKKYLGRLIDEPLVAAYGVTEP 570
             I     A             S   TP +   G+   + ++L   I+  LV++  V+EP
Sbjct: 91  IAIAEQIGAVDCGSIPMSVMVQSDMSTPALAQFGSDSLRNRFLRPSINGDLVSSIAVSEP 150


>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
            protein 1 protein.
          Length = 1852

 Score = 33.1 bits (72), Expect = 0.15
 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
 Frame = -1

Query: 467  PKDVPPIAVVMPVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYS 291
            P   P      P  P+ S S+  +S  +P + P  P+ S   P   PTS  +  T   YS
Sbjct: 1638 PSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYS 1697

Query: 290  P 288
            P
Sbjct: 1698 P 1698



 Score = 32.3 bits (70), Expect = 0.25
 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
 Frame = -1

Query: 467  PKDVPPIAVVMPVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYS 291
            P   P      P  P+ S S+  +S  +P++ P  P  S   P   PTS  +  T   YS
Sbjct: 1645 PSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYS 1704

Query: 290  P 288
            P
Sbjct: 1705 P 1705



 Score = 31.9 bits (69), Expect = 0.34
 Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
 Frame = -1

Query: 476  GVCPKDVPPIAVVMPVHPNASSSATMHSSKTPKFPMPPQCSGMCPFIRPTSQAFFTTGHG 297
            GV     P  ++  P +   S S +  S    + P+ P  S   P   PTS ++  T   
Sbjct: 1573 GVYSPSSPQFSMTSPHYSPTSPSYSPTSPAAGQSPVSPSYSPTSPSYSPTSPSYSPTSPS 1632

Query: 296  YSPVL-SY*PAT 264
            YSP   SY P +
Sbjct: 1633 YSPTSPSYSPTS 1644



 Score = 30.7 bits (66), Expect = 0.78
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
 Frame = -1

Query: 434  PVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYSPVL-SY*PAT 264
            P  P+ S ++  +S  +P + P  P  S   P   PTS ++  +   YSP   SY P++
Sbjct: 1614 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSS 1672



 Score = 29.1 bits (62), Expect = 2.4
 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
 Frame = -1

Query: 434  PVHPNASSS--ATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYSPVL-SY*PA 267
            P  P A  S  +  +S  +P + P  P  S   P   PTS ++  T   YSP   SY P+
Sbjct: 1598 PTSPAAGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPS 1657

Query: 266  T 264
            +
Sbjct: 1658 S 1658



 Score = 28.7 bits (61), Expect = 3.1
 Identities = 17/60 (28%), Positives = 23/60 (38%)
 Frame = -1

Query: 467  PKDVPPIAVVMPVHPNASSSATMHSSKTPKFPMPPQCSGMCPFIRPTSQAFFTTGHGYSP 288
            P   P      P  P  S ++  + S     P  P+ S   P   PTS ++  T   YSP
Sbjct: 1687 PTYSPTSPTYSPTSPTYSPTSPSYESGGGYSPSSPKYSPSSPTYSPTSPSYSPTSPQYSP 1746



 Score = 28.3 bits (60), Expect = 4.1
 Identities = 19/61 (31%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
 Frame = -1

Query: 467  PKDVPPIAVVMPVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYS 291
            P   P      P  P+  S    +S  +PK+ P  P  S   P   PTS  +  T   YS
Sbjct: 1694 PTYSPTSPTYSPTSPSYESGGG-YSPSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQYS 1752

Query: 290  P 288
            P
Sbjct: 1753 P 1753



 Score = 28.3 bits (60), Expect = 4.1
 Identities = 16/60 (26%), Positives = 26/60 (43%)
 Frame = -1

Query: 467  PKDVPPIAVVMPVHPNASSSATMHSSKTPKFPMPPQCSGMCPFIRPTSQAFFTTGHGYSP 288
            P+  P      P  P  + S+  ++  +P+    PQ S   P   PTS ++  +   YSP
Sbjct: 1742 PQYSPTSPQYSPSSPTYTPSSPTYNPTSPRGFSSPQYSPTSPTYSPTSPSYTPSSPQYSP 1801



 Score = 27.9 bits (59), Expect = 5.5
 Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = -1

Query: 434  PVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYSP 288
            P  P  S S+  +S  +P + P  PQ S   P   P+S  +  +   Y+P
Sbjct: 1718 PSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSSPTYTPSSPTYNP 1767


>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
            RNA polymeraseII largest subunit (ama-1 IV) gene,
            complete cds. ).
          Length = 1859

 Score = 33.1 bits (72), Expect = 0.15
 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
 Frame = -1

Query: 467  PKDVPPIAVVMPVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYS 291
            P   P      P  P+ S S+  +S  +P + P  P+ S   P   PTS  +  T   YS
Sbjct: 1645 PSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYS 1704

Query: 290  P 288
            P
Sbjct: 1705 P 1705



 Score = 32.3 bits (70), Expect = 0.25
 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
 Frame = -1

Query: 467  PKDVPPIAVVMPVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYS 291
            P   P      P  P+ S S+  +S  +P++ P  P  S   P   PTS  +  T   YS
Sbjct: 1652 PSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYS 1711

Query: 290  P 288
            P
Sbjct: 1712 P 1712



 Score = 31.9 bits (69), Expect = 0.34
 Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
 Frame = -1

Query: 476  GVCPKDVPPIAVVMPVHPNASSSATMHSSKTPKFPMPPQCSGMCPFIRPTSQAFFTTGHG 297
            GV     P  ++  P +   S S +  S    + P+ P  S   P   PTS ++  T   
Sbjct: 1580 GVYSPSSPQFSMTSPHYSPTSPSYSPTSPAAGQSPVSPSYSPTSPSYSPTSPSYSPTSPS 1639

Query: 296  YSPVL-SY*PAT 264
            YSP   SY P +
Sbjct: 1640 YSPTSPSYSPTS 1651



 Score = 30.7 bits (66), Expect = 0.78
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
 Frame = -1

Query: 434  PVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYSPVL-SY*PAT 264
            P  P+ S ++  +S  +P + P  P  S   P   PTS ++  +   YSP   SY P++
Sbjct: 1621 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSS 1679



 Score = 29.1 bits (62), Expect = 2.4
 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
 Frame = -1

Query: 434  PVHPNASSS--ATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYSPVL-SY*PA 267
            P  P A  S  +  +S  +P + P  P  S   P   PTS ++  T   YSP   SY P+
Sbjct: 1605 PTSPAAGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPS 1664

Query: 266  T 264
            +
Sbjct: 1665 S 1665



 Score = 28.7 bits (61), Expect = 3.1
 Identities = 17/60 (28%), Positives = 23/60 (38%)
 Frame = -1

Query: 467  PKDVPPIAVVMPVHPNASSSATMHSSKTPKFPMPPQCSGMCPFIRPTSQAFFTTGHGYSP 288
            P   P      P  P  S ++  + S     P  P+ S   P   PTS ++  T   YSP
Sbjct: 1694 PTYSPTSPTYSPTSPTYSPTSPSYESGGGYSPSSPKYSPSSPTYSPTSPSYSPTSPQYSP 1753



 Score = 28.3 bits (60), Expect = 4.1
 Identities = 19/61 (31%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
 Frame = -1

Query: 467  PKDVPPIAVVMPVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYS 291
            P   P      P  P+  S    +S  +PK+ P  P  S   P   PTS  +  T   YS
Sbjct: 1701 PTYSPTSPTYSPTSPSYESGGG-YSPSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQYS 1759

Query: 290  P 288
            P
Sbjct: 1760 P 1760



 Score = 28.3 bits (60), Expect = 4.1
 Identities = 16/60 (26%), Positives = 26/60 (43%)
 Frame = -1

Query: 467  PKDVPPIAVVMPVHPNASSSATMHSSKTPKFPMPPQCSGMCPFIRPTSQAFFTTGHGYSP 288
            P+  P      P  P  + S+  ++  +P+    PQ S   P   PTS ++  +   YSP
Sbjct: 1749 PQYSPTSPQYSPSSPTYTPSSPTYNPTSPRGFSSPQYSPTSPTYSPTSPSYTPSSPQYSP 1808



 Score = 27.9 bits (59), Expect = 5.5
 Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = -1

Query: 434  PVHPNASSSATMHSSKTPKF-PMPPQCSGMCPFIRPTSQAFFTTGHGYSP 288
            P  P  S S+  +S  +P + P  PQ S   P   P+S  +  +   Y+P
Sbjct: 1725 PSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSSPTYTPSSPTYNP 1774


>Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical protein
            C52A11.4f protein.
          Length = 2371

 Score = 30.7 bits (66), Expect = 0.78
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -1

Query: 464  KDVPPIAVVMPVHPNASSSATMHSSKTPKFPMPPQCS 354
            +++PP A+V P+ P  SSS +  S     FP PP  S
Sbjct: 1548 EELPPTALVTPLKPMISSSGSSTSKPAMNFP-PPSIS 1583


>Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical protein
            C52A11.4a protein.
          Length = 2393

 Score = 30.7 bits (66), Expect = 0.78
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -1

Query: 464  KDVPPIAVVMPVHPNASSSATMHSSKTPKFPMPPQCS 354
            +++PP A+V P+ P  SSS +  S     FP PP  S
Sbjct: 1570 EELPPTALVTPLKPMISSSGSSTSKPAMNFP-PPSIS 1605


>Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical protein
            C52A11.4e protein.
          Length = 2184

 Score = 30.7 bits (66), Expect = 0.78
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -1

Query: 464  KDVPPIAVVMPVHPNASSSATMHSSKTPKFPMPPQCS 354
            +++PP A+V P+ P  SSS +  S     FP PP  S
Sbjct: 1361 EELPPTALVTPLKPMISSSGSSTSKPAMNFP-PPSIS 1396


>Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical protein
            C52A11.4d protein.
          Length = 2491

 Score = 30.7 bits (66), Expect = 0.78
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -1

Query: 464  KDVPPIAVVMPVHPNASSSATMHSSKTPKFPMPPQCS 354
            +++PP A+V P+ P  SSS +  S     FP PP  S
Sbjct: 1668 EELPPTALVTPLKPMISSSGSSTSKPAMNFP-PPSIS 1703


>Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical protein
            C52A11.4f protein.
          Length = 2371

 Score = 30.7 bits (66), Expect = 0.78
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -1

Query: 464  KDVPPIAVVMPVHPNASSSATMHSSKTPKFPMPPQCS 354
            +++PP A+V P+ P  SSS +  S     FP PP  S
Sbjct: 1548 EELPPTALVTPLKPMISSSGSSTSKPAMNFP-PPSIS 1583


>Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical protein
            C52A11.4a protein.
          Length = 2393

 Score = 30.7 bits (66), Expect = 0.78
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -1

Query: 464  KDVPPIAVVMPVHPNASSSATMHSSKTPKFPMPPQCS 354
            +++PP A+V P+ P  SSS +  S     FP PP  S
Sbjct: 1570 EELPPTALVTPLKPMISSSGSSTSKPAMNFP-PPSIS 1605


>Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical protein
            C52A11.4e protein.
          Length = 2184

 Score = 30.7 bits (66), Expect = 0.78
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -1

Query: 464  KDVPPIAVVMPVHPNASSSATMHSSKTPKFPMPPQCS 354
            +++PP A+V P+ P  SSS +  S     FP PP  S
Sbjct: 1361 EELPPTALVTPLKPMISSSGSSTSKPAMNFP-PPSIS 1396


>Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical protein
            C52A11.4d protein.
          Length = 2491

 Score = 30.7 bits (66), Expect = 0.78
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -1

Query: 464  KDVPPIAVVMPVHPNASSSATMHSSKTPKFPMPPQCS 354
            +++PP A+V P+ P  SSS +  S     FP PP  S
Sbjct: 1668 EELPPTALVTPLKPMISSSGSSTSKPAMNFP-PPSIS 1703


>Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical protein
            C52A11.4c protein.
          Length = 2202

 Score = 30.7 bits (66), Expect = 0.78
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -1

Query: 464  KDVPPIAVVMPVHPNASSSATMHSSKTPKFPMPPQCS 354
            +++PP A+V P+ P  SSS +  S     FP PP  S
Sbjct: 1379 EELPPTALVTPLKPMISSSGSSTSKPAMNFP-PPSIS 1414


>DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein.
          Length = 2166

 Score = 30.7 bits (66), Expect = 0.78
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -1

Query: 464  KDVPPIAVVMPVHPNASSSATMHSSKTPKFPMPPQCS 354
            +++PP A+V P+ P  SSS +  S     FP PP  S
Sbjct: 1339 EELPPTALVTPLKPMISSSGSSTSKPAMNFP-PPSIS 1374


>Z99710-5|CAB16866.1|  662|Caenorhabditis elegans Hypothetical
           protein F08A8.4 protein.
          Length = 662

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +1

Query: 478 IIIAGNKEQQKKYLGRLIDEPLVAAYGVTEPG 573
           ++   +KEQQ+K+LGR     ++  Y  TE G
Sbjct: 123 LVSQASKEQQEKWLGRARRREIIGCYAQTEMG 154


>Z99710-4|CAB16865.1|  660|Caenorhabditis elegans Hypothetical
           protein F08A8.3 protein.
          Length = 660

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = +1

Query: 475 PIIIA-GNKEQQKKYLGRLIDEPLVAAYGVTEPG 573
           P ++A  ++EQQ+K+LGR   + ++  Y  TE G
Sbjct: 119 PTLVAQASQEQQEKWLGRARRKEIIGCYAQTEMG 152


>AL117203-5|CAB55107.1|  291|Caenorhabditis elegans Hypothetical
           protein Y48C3A.8 protein.
          Length = 291

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 21/67 (31%), Positives = 27/67 (40%)
 Frame = -1

Query: 569 GSVTP*AATNGSSISLPRYFFCCSLFPAIMMGVCPKDVPPIAVVMPVHPNASSSATMHSS 390
           G   P    +GS   +P          +  MGV P D+PP  + MP  P  SSSA     
Sbjct: 17  GGAQPFPGASGSGGMMPNGAHPHMSLNSPSMGVPPADMPPF-MGMPPMPPTSSSAMPFGM 75

Query: 389 KTPKFPM 369
            +   PM
Sbjct: 76  SSDHQPM 82


>U41032-4|AAO44918.2| 1130|Caenorhabditis elegans Protein kinase
           protein 25, isoformb protein.
          Length = 1130

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -1

Query: 452 PIAVVMPVHPNASSSATMHSSKTPKFPMPPQCS 354
           P+ V  P H N + + +  +S   + P+PP+ S
Sbjct: 736 PVQVSAPTHSNVAPTTSSQASADARNPLPPKTS 768


>U41032-3|AAO44917.1| 1237|Caenorhabditis elegans Protein kinase
           protein 25, isoforma protein.
          Length = 1237

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -1

Query: 452 PIAVVMPVHPNASSSATMHSSKTPKFPMPPQCS 354
           P+ V  P H N + + +  +S   + P+PP+ S
Sbjct: 843 PVQVSAPTHSNVAPTTSSQASADARNPLPPKTS 875


>U23179-2|AAK68207.1|  345|Caenorhabditis elegans Serpentine
           receptor, class b (beta)protein 5 protein.
          Length = 345

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = -3

Query: 402 DALFEDAKIP-YAPAMFWNVSVH*ANFPSLLYNGPRVLPRLIILTRHRN 259
           D  F+ +  P Y  A FW +SV     PSLLY    +L R+++L  H N
Sbjct: 10  DLAFQISYHPIYRLAQFWTLSVSLLAVPSLLY---FLLKRVLLLPFHGN 55


>Z30215-6|CAF31477.2| 1144|Caenorhabditis elegans Hypothetical
           protein F40F12.5 protein.
          Length = 1144

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 13/32 (40%), Positives = 14/32 (43%)
 Frame = -1

Query: 461 DVPPIAVVMPVHPNASSSATMHSSKTPKFPMP 366
           D PP     P  P ASS+A  H    P  P P
Sbjct: 586 DPPPPPYAPPSPPRASSAAAAHQQPPPLPPKP 617


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,941,292
Number of Sequences: 27780
Number of extensions: 271931
Number of successful extensions: 862
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 847
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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