Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0981
(603 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC108915-1|AAI08916.1| 258|Homo sapiens VENT homeobox homolog (... 31 4.1
BC005186-1|AAH05186.1| 142|Homo sapiens mitochondrial ribosomal... 31 4.1
AF151892-1|AAD34129.1| 142|Homo sapiens CGI-134 protein protein. 31 4.1
U19969-1|AAA62155.1| 1154|Homo sapiens ZEB protein. 29 9.5
U12170-1|AAA20602.1| 1124|Homo sapiens zinc finger homeodomain p... 29 9.5
D15050-1|BAA03646.1| 1124|Homo sapiens transcription factor AREB... 29 9.5
BC112392-1|AAI12393.1| 1125|Homo sapiens zinc finger E-box bindi... 29 9.5
BC009572-1|AAH09572.1| 1059|Homo sapiens Unknown (protein for IM... 29 9.5
AL355148-2|CAI15107.1| 1104|Homo sapiens zinc finger E-box bindi... 29 9.5
AL355148-1|CAI15108.1| 1124|Homo sapiens zinc finger E-box bindi... 29 9.5
AL161935-2|CAH74131.1| 1104|Homo sapiens zinc finger E-box bindi... 29 9.5
AL161935-1|CAH74132.1| 1124|Homo sapiens zinc finger E-box bindi... 29 9.5
AL158080-2|CAI17319.1| 1104|Homo sapiens zinc finger E-box bindi... 29 9.5
AL158080-1|CAI17320.1| 1124|Homo sapiens zinc finger E-box bindi... 29 9.5
AL117340-2|CAI12549.1| 1104|Homo sapiens zinc finger E-box bindi... 29 9.5
AL117340-1|CAI12550.1| 1124|Homo sapiens zinc finger E-box bindi... 29 9.5
AK126969-1|BAC86769.1| 245|Homo sapiens protein ( Homo sapiens ... 29 9.5
AK091478-1|BAC03673.1| 1104|Homo sapiens protein ( Homo sapiens ... 29 9.5
>BC108915-1|AAI08916.1| 258|Homo sapiens VENT homeobox homolog
(Xenopus laevis) protein.
Length = 258
Score = 30.7 bits (66), Expect = 4.1
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = +1
Query: 397 GRVRKISESRSEGPALSPRSAGLSPHRSAPAMRSLSYCRAPHSRVSLRAA 546
G V +S+S GP +PR A SP S P S R P VS++ A
Sbjct: 18 GSVDWLSQSSCSGPTHTPRPADFSP-GSLPGPGQTSGAREPPQAVSIKEA 66
>BC005186-1|AAH05186.1| 142|Homo sapiens mitochondrial ribosomal
protein S18C protein.
Length = 142
Score = 30.7 bits (66), Expect = 4.1
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = -1
Query: 237 PLRRNKICSRKLTLRSIMILIFF---FTECLYFRKISGFC 127
PL++ +C + + +++ +L F FT C+Y R I+G C
Sbjct: 61 PLKKCILCGKHVDYKNVQLLSQFVSPFTGCIYGRHITGLC 100
>AF151892-1|AAD34129.1| 142|Homo sapiens CGI-134 protein protein.
Length = 142
Score = 30.7 bits (66), Expect = 4.1
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = -1
Query: 237 PLRRNKICSRKLTLRSIMILIFF---FTECLYFRKISGFC 127
PL++ +C + + +++ +L F FT C+Y R I+G C
Sbjct: 61 PLKKCILCGKHVDYKNVQLLSQFVSPFTGCIYGRHITGLC 100
>U19969-1|AAA62155.1| 1154|Homo sapiens ZEB protein.
Length = 1154
Score = 29.5 bits (63), Expect = 9.5
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -3
Query: 544 PHAARLASEARDSTTTSASPERCGED*ALPIVVTTPGLRTVTP 416
P +A A+E +DST SP + LP+ TT G R+ TP
Sbjct: 696 PQSAN-ANEPQDSTVNLQSPLKMTNSPVLPVGSTTNGSRSSTP 737
>U12170-1|AAA20602.1| 1124|Homo sapiens zinc finger homeodomain
protein protein.
Length = 1124
Score = 29.5 bits (63), Expect = 9.5
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -3
Query: 544 PHAARLASEARDSTTTSASPERCGED*ALPIVVTTPGLRTVTP 416
P +A A+E +DST SP + LP+ TT G R+ TP
Sbjct: 662 PQSAN-ANEPQDSTVNLQSPLKMTNSPVLPVGSTTNGSRSSTP 703
>D15050-1|BAA03646.1| 1124|Homo sapiens transcription factor AREB6
protein.
Length = 1124
Score = 29.5 bits (63), Expect = 9.5
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -3
Query: 544 PHAARLASEARDSTTTSASPERCGED*ALPIVVTTPGLRTVTP 416
P +A A+E +DST SP + LP+ TT G R+ TP
Sbjct: 662 PQSAN-ANEPQDSTVNLQSPLKMTNSPVLPVGSTTNGSRSSTP 703
>BC112392-1|AAI12393.1| 1125|Homo sapiens zinc finger E-box binding
homeobox 1 protein.
Length = 1125
Score = 29.5 bits (63), Expect = 9.5
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -3
Query: 544 PHAARLASEARDSTTTSASPERCGED*ALPIVVTTPGLRTVTP 416
P +A A+E +DST SP + LP+ TT G R+ TP
Sbjct: 663 PQSAN-ANEPQDSTVNLQSPLKMTNSPVLPVGSTTNGSRSSTP 704
>BC009572-1|AAH09572.1| 1059|Homo sapiens Unknown (protein for
IMAGE:4245215) protein.
Length = 1059
Score = 29.5 bits (63), Expect = 9.5
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -3
Query: 544 PHAARLASEARDSTTTSASPERCGED*ALPIVVTTPGLRTVTP 416
P +A A+E +DST SP + LP+ TT G R+ TP
Sbjct: 662 PQSAN-ANEPQDSTVNLQSPLKMTNSPVLPVGSTTNGSRSSTP 703
>AL355148-2|CAI15107.1| 1104|Homo sapiens zinc finger E-box binding
homeobox 1 protein.
Length = 1104
Score = 29.5 bits (63), Expect = 9.5
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -3
Query: 544 PHAARLASEARDSTTTSASPERCGED*ALPIVVTTPGLRTVTP 416
P +A A+E +DST SP + LP+ TT G R+ TP
Sbjct: 642 PQSAN-ANEPQDSTVNLQSPLKMTNSPVLPVGSTTNGSRSSTP 683
>AL355148-1|CAI15108.1| 1124|Homo sapiens zinc finger E-box binding
homeobox 1 protein.
Length = 1124
Score = 29.5 bits (63), Expect = 9.5
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -3
Query: 544 PHAARLASEARDSTTTSASPERCGED*ALPIVVTTPGLRTVTP 416
P +A A+E +DST SP + LP+ TT G R+ TP
Sbjct: 662 PQSAN-ANEPQDSTVNLQSPLKMTNSPVLPVGSTTNGSRSSTP 703
>AL161935-2|CAH74131.1| 1104|Homo sapiens zinc finger E-box binding
homeobox 1 protein.
Length = 1104
Score = 29.5 bits (63), Expect = 9.5
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -3
Query: 544 PHAARLASEARDSTTTSASPERCGED*ALPIVVTTPGLRTVTP 416
P +A A+E +DST SP + LP+ TT G R+ TP
Sbjct: 642 PQSAN-ANEPQDSTVNLQSPLKMTNSPVLPVGSTTNGSRSSTP 683
>AL161935-1|CAH74132.1| 1124|Homo sapiens zinc finger E-box binding
homeobox 1 protein.
Length = 1124
Score = 29.5 bits (63), Expect = 9.5
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -3
Query: 544 PHAARLASEARDSTTTSASPERCGED*ALPIVVTTPGLRTVTP 416
P +A A+E +DST SP + LP+ TT G R+ TP
Sbjct: 662 PQSAN-ANEPQDSTVNLQSPLKMTNSPVLPVGSTTNGSRSSTP 703
>AL158080-2|CAI17319.1| 1104|Homo sapiens zinc finger E-box binding
homeobox 1 protein.
Length = 1104
Score = 29.5 bits (63), Expect = 9.5
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -3
Query: 544 PHAARLASEARDSTTTSASPERCGED*ALPIVVTTPGLRTVTP 416
P +A A+E +DST SP + LP+ TT G R+ TP
Sbjct: 642 PQSAN-ANEPQDSTVNLQSPLKMTNSPVLPVGSTTNGSRSSTP 683
>AL158080-1|CAI17320.1| 1124|Homo sapiens zinc finger E-box binding
homeobox 1 protein.
Length = 1124
Score = 29.5 bits (63), Expect = 9.5
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -3
Query: 544 PHAARLASEARDSTTTSASPERCGED*ALPIVVTTPGLRTVTP 416
P +A A+E +DST SP + LP+ TT G R+ TP
Sbjct: 662 PQSAN-ANEPQDSTVNLQSPLKMTNSPVLPVGSTTNGSRSSTP 703
>AL117340-2|CAI12549.1| 1104|Homo sapiens zinc finger E-box binding
homeobox 1 protein.
Length = 1104
Score = 29.5 bits (63), Expect = 9.5
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -3
Query: 544 PHAARLASEARDSTTTSASPERCGED*ALPIVVTTPGLRTVTP 416
P +A A+E +DST SP + LP+ TT G R+ TP
Sbjct: 642 PQSAN-ANEPQDSTVNLQSPLKMTNSPVLPVGSTTNGSRSSTP 683
>AL117340-1|CAI12550.1| 1124|Homo sapiens zinc finger E-box binding
homeobox 1 protein.
Length = 1124
Score = 29.5 bits (63), Expect = 9.5
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -3
Query: 544 PHAARLASEARDSTTTSASPERCGED*ALPIVVTTPGLRTVTP 416
P +A A+E +DST SP + LP+ TT G R+ TP
Sbjct: 662 PQSAN-ANEPQDSTVNLQSPLKMTNSPVLPVGSTTNGSRSSTP 703
>AK126969-1|BAC86769.1| 245|Homo sapiens protein ( Homo sapiens
cDNA FLJ45022 fis, clone BRAWH3016715. ).
Length = 245
Score = 29.5 bits (63), Expect = 9.5
Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +2
Query: 317 RTIGTYTTLKGPVEPQNRRRRRGSTWEAGCGKY-RSHGPKARRCH 448
R G +TTL GP+ Q R G W A + R H P CH
Sbjct: 58 RAWGRHTTLLGPLGLQGPGCRPGCWWLASMATHGRLHAPYLLLCH 102
>AK091478-1|BAC03673.1| 1104|Homo sapiens protein ( Homo sapiens
cDNA FLJ34159 fis, clone FCBBF3013623, highly similar to
NIL-2-A ZINC FINGER PROTEIN. ).
Length = 1104
Score = 29.5 bits (63), Expect = 9.5
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -3
Query: 544 PHAARLASEARDSTTTSASPERCGED*ALPIVVTTPGLRTVTP 416
P +A A+E +DST SP + LP+ TT G R+ TP
Sbjct: 642 PQSAN-ANEPQDSTVNLQSPLKMTNSPVLPVGSTTNGSRSSTP 683
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,013,023
Number of Sequences: 237096
Number of extensions: 1323483
Number of successful extensions: 4038
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4038
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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