Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0980
         (590 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    23   3.0  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    22   3.9  
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    22   5.2  
DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    21   6.8  
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    21   6.8  
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    21   6.8  
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    21   6.8  
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    21   6.8  

>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 169 FSFMNFNLISFN 204
           FS +NFNL+ FN
Sbjct: 144 FSLLNFNLLFFN 155


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +1

Query: 508 HHSHPAEPH 534
           HHSH A PH
Sbjct: 433 HHSHAATPH 441


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -1

Query: 416 VSTLITNYRTKNRYKNNIGQLLQGIGN 336
           +S+L  NY   N   NN  QL   I +
Sbjct: 82  ISSLSNNYNYSNYNNNNYKQLCYNINH 108


>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -1

Query: 416 VSTLITNYRTKNRYKNNIGQLLQGI 342
           +S+L  NY   N   NN  QL   I
Sbjct: 82  ISSLSNNYNYSNYNNNNYKQLCYNI 106


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -1

Query: 416 VSTLITNYRTKNRYKNNIGQLLQGI 342
           +S+L  NY   N   NN  QL   I
Sbjct: 82  ISSLSNNYNYSNYNNNNYKQLCYNI 106


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -1

Query: 416 VSTLITNYRTKNRYKNNIGQLLQGI 342
           +S+L  NY   N   NN  QL   I
Sbjct: 82  ISSLSNNYNYSNYNNNNYKQLCYNI 106


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -1

Query: 416 VSTLITNYRTKNRYKNNIGQLLQGI 342
           +S+L  NY   N   NN  QL   I
Sbjct: 82  ISSLSNNYNYSNYNNNNYKQLCYNI 106


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -1

Query: 416 VSTLITNYRTKNRYKNNIGQLLQGI 342
           +S+L  NY   N   NN  QL   I
Sbjct: 82  ISSLSNNYNYSNYNNNNYKQLCYNI 106


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,950
Number of Sequences: 438
Number of extensions: 4027
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17237673
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)