Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0979
         (600 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067613-4|AAU20845.1|  327|Caenorhabditis elegans Hypothetical ...    32   0.36 
AL033510-3|CAA22066.1|  323|Caenorhabditis elegans Hypothetical ...    30   1.1  
Z93380-4|CAB07597.1|  339|Caenorhabditis elegans Hypothetical pr...    28   4.4  
Z82057-3|CAB04860.2|  303|Caenorhabditis elegans Hypothetical pr...    28   4.4  
Z19157-3|CAA79566.3|  395|Caenorhabditis elegans Hypothetical pr...    28   4.4  
Z71186-7|CAM35835.1|  552|Caenorhabditis elegans Hypothetical pr...    27   7.7  

>AF067613-4|AAU20845.1|  327|Caenorhabditis elegans Hypothetical
           protein F56D6.7 protein.
          Length = 327

 Score = 31.9 bits (69), Expect = 0.36
 Identities = 14/64 (21%), Positives = 34/64 (53%)
 Frame = -1

Query: 300 LYLLHTNVLPYFSLWVITLQLIILLSYHIHMYILYVCLPIVSMIMSLALIYKSTYINVHI 121
           L+L   ++L Y     +    +++++YH+ + + +V + ++++   L   + S   NV I
Sbjct: 85  LFLATNSILSYIGFLSLPAWALVIVTYHLIVEVFHVLISLLAIEKFLIYFFPSWEKNVLI 144

Query: 120 FQRF 109
            Q+F
Sbjct: 145 VQKF 148


>AL033510-3|CAA22066.1|  323|Caenorhabditis elegans Hypothetical
           protein Y40H7A.5 protein.
          Length = 323

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = -1

Query: 234 ILLSYHIHMYILYVCLP-IVSMIMSLALIYKSTYINVHIFQRFHKAHNL 91
           ++  Y    YILYVC P I S+I +  L+Y  +++++ ++ +   A  +
Sbjct: 105 LIACYLFRYYILYVCDPSIKSIIFAAFLVYTPSFVHMAMWIKLFDAEQM 153


>Z93380-4|CAB07597.1|  339|Caenorhabditis elegans Hypothetical
           protein F28C12.5 protein.
          Length = 339

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -1

Query: 222 YHIHMYILYVCLPIVSMIMSLALIYKSTYINVHI 121
           YH H Y + V L ++ ++++L   Y   Y  VH+
Sbjct: 144 YHTHQYFIAVSLLVLQLLLTLVSFY-IAYYGVHL 176


>Z82057-3|CAB04860.2|  303|Caenorhabditis elegans Hypothetical
           protein T26H8.2 protein.
          Length = 303

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 13/45 (28%), Positives = 24/45 (53%)
 Frame = -3

Query: 295 FAAYKRPALFFSVGYYTSANNTFIIPHTYVYIICMSTYCFYDHEF 161
           F   K P+L  S G  T++ +     H+ ++   +S+ CF+D +F
Sbjct: 30  FLIKKLPSLKNSFGMLTTSQSIGDAVHSTIFAFIVSSMCFFDLKF 74


>Z19157-3|CAA79566.3|  395|Caenorhabditis elegans Hypothetical
           protein ZC84.4 protein.
          Length = 395

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 11/35 (31%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
 Frame = -1

Query: 261 LWVITLQLIILLSYHIHM--YILYVCLPIVSMIMS 163
           +W++  + II++SY IH+  YI  V  P++  +++
Sbjct: 279 IWIMEKKSIIIISYFIHLLPYISCVAYPLIFTLLN 313


>Z71186-7|CAM35835.1|  552|Caenorhabditis elegans Hypothetical
           protein F23D12.10 protein.
          Length = 552

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = -1

Query: 597 CTDNNDWRKGCRSNQRILVKTYGAVTDKTKNILKIYSTY*TYFF 466
           CT +N+    C+++QR   K    V DKT++++K  S    Y F
Sbjct: 117 CTSDNNNNNSCKNDQRNEEK----VDDKTRSLIKKLSKIANYVF 156


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,801,267
Number of Sequences: 27780
Number of extensions: 261504
Number of successful extensions: 626
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 626
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)