Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0978
(597 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 231 4e-62
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 213 2e-56
SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr... 186 2e-48
SPBC2D10.14c |myo51||myosin type V|Schizosaccharomyces pombe|chr... 179 2e-46
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 161 5e-41
SPBC16H5.10c |prp43||ATP-dependent RNA helicase Prp43|Schizosacc... 30 0.22
SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharo... 27 2.7
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 27 2.7
SPBPB21E7.07 |aes1|SPAPB21E7.07, SPAPB21E7.07|enhancer of RNA-me... 26 3.6
SPBC887.14c |pfh1|pif1|pif1 helicase homolog Pfh1|Schizosaccharo... 26 4.8
SPAC4G8.05 |ppk14||serine/threonine protein kinase Ppk14 |Schizo... 26 4.8
SPBC1711.17 |prp16|SPBC17G9.01|ATP-dependent RNA helicase Prp16|... 25 6.3
SPAC17G8.01c |trl1|SPAC6C3.10c|tRNA ligase Trl1 |Schizosaccharom... 25 6.3
SPAC630.07c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 8.4
SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces ... 25 8.4
SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr ... 25 8.4
SPAC10F6.02c |prp22||ATP-dependent RNA helicase Prp22|Schizosacc... 25 8.4
SPBC30D10.16 |pha2||phrenate dehydratase|Schizosaccharomyces pom... 25 8.4
SPCC18B5.03 |wee1||dual specificity protein kinase Wee1|Schizosa... 25 8.4
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 231 bits (566), Expect = 4e-62
Identities = 109/192 (56%), Positives = 143/192 (74%)
Frame = +1
Query: 22 SNLTYLNDASVLYNLKQRYYHKLIYTYSGLFCVAINPYKRFPVYTTRCAKLYRGKRRSEV 201
+ LTYLN+ +V YNL+QRY IYTYSGLF VA+NPY P+YT +LY+ K +
Sbjct: 83 AELTYLNEPAVTYNLEQRYLSDQIYTYSGLFLVAVNPYCGLPIYTKDIIQLYKDKTQERK 142
Query: 202 PPHIFAISDGAYVNMLTNHENQSMLITGESGAGKTENTKKVIAYFATVGASQKKDPSQEK 381
PH+FAI+D AY N+L N ENQS+L+TGESGAGKTENTK++I Y A + +S SQ
Sbjct: 143 LPHVFAIADLAYNNLLENKENQSILVTGESGAGKTENTKRIIQYLAAIASSTTVGSSQ-- 200
Query: 382 KGSLEDQVVQTNPVLEAFGNAKTVRNDNSSRFGKFIRIHFGPSGKLAGADIETYLLEKAR 561
+E+Q+++TNPVLE+FGNA+TVRN+NSSRFGKFI++ F SG+++ A IE YLLEK+R
Sbjct: 201 ---VEEQIIKTNPVLESFGNARTVRNNNSSRFGKFIKVEFSLSGEISNAAIEWYLLEKSR 257
Query: 562 VISQQALERSYH 597
V+ Q ER+YH
Sbjct: 258 VVHQNEFERNYH 269
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 213 bits (520), Expect = 2e-56
Identities = 105/190 (55%), Positives = 133/190 (70%)
Frame = +1
Query: 28 LTYLNDASVLYNLKQRYYHKLIYTYSGLFCVAINPYKRFPVYTTRCAKLYRGKRRSEVPP 207
LT LN+ SV+ NL QRY LIYTYSGLF VA+NPY P+Y + Y+ K+ E P
Sbjct: 97 LTCLNEPSVVNNLTQRYEKDLIYTYSGLFLVAVNPYCHLPIYGDDVVRKYQSKQFKETKP 156
Query: 208 HIFAISDGAYVNMLTNHENQSMLITGESGAGKTENTKKVIAYFATVGASQKKDPSQEKKG 387
HIF +D AY ++L NQS+L+TGESGAGKTE TKKVI Y +V + D Q
Sbjct: 157 HIFGTADAAYRSLLERRINQSILVTGESGAGKTETTKKVIQYLTSVTDASTSDSQQ---- 212
Query: 388 SLEDQVVQTNPVLEAFGNAKTVRNDNSSRFGKFIRIHFGPSGKLAGADIETYLLEKARVI 567
LE ++++TNPVLEAFGNA+TVRN+NSSRFGKFIRI F +G + GA+++ YLLEK+RVI
Sbjct: 213 -LEKKILETNPVLEAFGNAQTVRNNNSSRFGKFIRIEFSNNGSIVGANLDWYLLEKSRVI 271
Query: 568 SQQALERSYH 597
+ ER+YH
Sbjct: 272 HPSSNERNYH 281
>SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1516
Score = 186 bits (454), Expect = 2e-48
Identities = 91/197 (46%), Positives = 137/197 (69%), Gaps = 5/197 (2%)
Frame = +1
Query: 22 SNLTYLNDASVLYNLKQRYYHKLIYTYSGLFCVAINPYKRFP-VYTTRCAKLYRGKRRSE 198
++L+YLN+ SVL L RY IYTYSG+ +A+NP++R P +YT + Y K R E
Sbjct: 79 TDLSYLNEPSVLDALSTRYNQLQIYTYSGIVLIAVNPFQRLPNLYTHEIVRAYSEKSRDE 138
Query: 199 VPPHIFAISDGAYVNMLTNHENQSMLITGESGAGKTENTKKVIAYFATVGAS-QKKDPSQ 375
+ PH++AI++ +Y M H+NQ+++I+GESGAGKT + + ++ YFA+V A Q D +
Sbjct: 139 LDPHLYAIAEDSYKCMNQEHKNQTIIISGESGAGKTVSARYIMRYFASVQALIQSTDSNF 198
Query: 376 EKKGSL---EDQVVQTNPVLEAFGNAKTVRNDNSSRFGKFIRIHFGPSGKLAGADIETYL 546
+ L E++++ TNP++EAFGN+KT RNDNSSRFGK+I+I F + + GA I+TYL
Sbjct: 199 HEAPQLTAVENEILATNPIMEAFGNSKTSRNDNSSRFGKYIQILFDGNATIIGAKIQTYL 258
Query: 547 LEKARVISQQALERSYH 597
LE++R++ Q ER+YH
Sbjct: 259 LERSRLVFQPNQERNYH 275
>SPBC2D10.14c |myo51||myosin type V|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1471
Score = 179 bits (436), Expect = 2e-46
Identities = 88/193 (45%), Positives = 129/193 (66%), Gaps = 1/193 (0%)
Frame = +1
Query: 22 SNLTYLNDASVLYNLKQRYYHKLIYTYSGLFCVAINPYKRFP-VYTTRCAKLYRGKRRSE 198
+NL YLN+ SVL+ L RY +K IYTYSG+ V+INPY+ P Y K + +
Sbjct: 71 TNLPYLNEPSVLHALHNRYNNKQIYTYSGIVLVSINPYQNLPEFYNDNLIKHFHKDPEAA 130
Query: 199 VPPHIFAISDGAYVNMLTNHENQSMLITGESGAGKTENTKKVIAYFATVGASQKKDPSQE 378
PH+++I+ Y + T+ +NQ+++++GESGAGKT K ++ Y +V Q D +
Sbjct: 131 KVPHLYSIASSCYHALTTDSKNQTIIVSGESGAGKTVAAKYIMRYLTSV---QGVDHNGV 187
Query: 379 KKGSLEDQVVQTNPVLEAFGNAKTVRNDNSSRFGKFIRIHFGPSGKLAGADIETYLLEKA 558
K S+E+QV+ TNP++EAFGNAKT+RNDNSSRFGK++ I F + + GA++ TYLLE++
Sbjct: 188 VKRSVENQVLATNPIMEAFGNAKTIRNDNSSRFGKYVTISFDENLLITGANVNTYLLERS 247
Query: 559 RVISQQALERSYH 597
RV+S ER+YH
Sbjct: 248 RVVSLLKGERNYH 260
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 161 bits (392), Expect = 5e-41
Identities = 78/190 (41%), Positives = 120/190 (63%)
Frame = +1
Query: 28 LTYLNDASVLYNLKQRYYHKLIYTYSGLFCVAINPYKRFPVYTTRCAKLYRGKRRSEVPP 207
L+ + D + NL+ R+ + IYTY G +++NP++ +YT K Y+GK R E P
Sbjct: 48 LSKITDEEINKNLELRFRNGEIYTYIGHVLISVNPFRDLGIYTMDILKSYQGKNRLETSP 107
Query: 208 HIFAISDGAYVNMLTNHENQSMLITGESGAGKTENTKKVIAYFATVGASQKKDPSQEKKG 387
H++AI++ AY M + HENQ ++I+GESGAGKTE K+++ Y V S + +
Sbjct: 108 HVYAIAENAYYQMKSYHENQCIIISGESGAGKTEAAKRIMQYITHVSKSVGTEIER---- 163
Query: 388 SLEDQVVQTNPVLEAFGNAKTVRNDNSSRFGKFIRIHFGPSGKLAGADIETYLLEKARVI 567
+ + ++ TNP+LE+FG AKT+RN+NSSR GK++ + F G GA I YLLEK R++
Sbjct: 164 -VSEIILATNPLLESFGCAKTLRNNNSSRHGKYLEMIFNSGGVPVGAKITNYLLEKNRIV 222
Query: 568 SQQALERSYH 597
+Q ER++H
Sbjct: 223 NQVRNERNFH 232
>SPBC16H5.10c |prp43||ATP-dependent RNA helicase
Prp43|Schizosaccharomyces pombe|chr 2|||Manual
Length = 735
Score = 30.3 bits (65), Expect = 0.22
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 256 HENQSMLITGESGAGKTENTKKVIAY 333
HENQ ++ GE+G+GKT + + Y
Sbjct: 89 HENQIIVFVGETGSGKTTQIPQFVLY 114
>SPAC3G6.01 |hrp3||ATP-dependent DNA helicase
Hrp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1388
Score = 26.6 bits (56), Expect = 2.7
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +1
Query: 256 HENQSMLITGESGAGKTENTKKVIAYFA 339
H+N++ ++ E G GKT T ++Y A
Sbjct: 391 HKNENGILADEMGLGKTVQTVAFLSYLA 418
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 26.6 bits (56), Expect = 2.7
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 340 TVGASQKKDPSQEKKGSLEDQVVQTNPVLEA 432
T KK+PS+EKK + D+ + P+ E+
Sbjct: 504 TFSEDVKKEPSEEKKLEVSDEAPKAAPLAES 534
>SPBPB21E7.07 |aes1|SPAPB21E7.07, SPAPB21E7.07|enhancer of
RNA-mediated gene silencing |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 296
Score = 26.2 bits (55), Expect = 3.6
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 533 MSAPASFPDGPKWIRMNLPKREEL 462
+S P DGPKW+ + LP ++
Sbjct: 156 VSPPVLIDDGPKWLVIQLPNATDV 179
>SPBC887.14c |pfh1|pif1|pif1 helicase homolog
Pfh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 805
Score = 25.8 bits (54), Expect = 4.8
Identities = 17/73 (23%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +1
Query: 112 FCVAINPYKRFPVYTTRCAKLYR-GKRRSEVPPHIFAISDGAYVNMLTNHENQSMLITGE 288
F V +N + P+ ++ L++ R + P IF + + + + S+ TG
Sbjct: 278 FSVPLNSASKSPIGSS----LFKTSDSRKKSVPSIFLSDEQKRILDMVVEQQHSIFFTGS 333
Query: 289 SGAGKTENTKKVI 327
+G GK+ +K+I
Sbjct: 334 AGTGKSVLLRKII 346
>SPAC4G8.05 |ppk14||serine/threonine protein kinase Ppk14
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 566
Score = 25.8 bits (54), Expect = 4.8
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +1
Query: 364 DPSQEKKGSLEDQVVQTNPVLEAFGNAKTVRNDNSSRFGKFIRIHFGPSGKLA 522
+ S+E + ++ED + + + G+ K S+F FIR+HF S K A
Sbjct: 8 ESSEEGRINVEDHLEEAKK--DDTGHWKHSGTAKPSKFRAFIRLHFKDSRKFA 58
>SPBC1711.17 |prp16|SPBC17G9.01|ATP-dependent RNA helicase
Prp16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1173
Score = 25.4 bits (53), Expect = 6.3
Identities = 8/16 (50%), Positives = 14/16 (87%)
Frame = +1
Query: 259 ENQSMLITGESGAGKT 306
+NQ +++ GE+G+GKT
Sbjct: 507 DNQVLIVVGETGSGKT 522
>SPAC17G8.01c |trl1|SPAC6C3.10c|tRNA ligase Trl1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 787
Score = 25.4 bits (53), Expect = 6.3
Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 304 TENTKKVIAYFATVGASQKK-DPSQEKKGSLEDQVVQTNPVLEAFGNAKTVRN 459
+E KV A T K DP+ K + D +++ +P++ + NA+ + N
Sbjct: 504 SEGVDKVKAIMNTFYKQYKPFDPAGNKHDANYDDIIELDPLIGSLENARRIVN 556
>SPAC630.07c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 430
Score = 25.0 bits (52), Expect = 8.4
Identities = 23/65 (35%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Frame = -2
Query: 479 PKREELSLRTVLALPNAS----STGLVCTT*SSREPFFSWLGSFFWEAPTVAKYAITFFV 312
P+ L+ +L LP AS S G + T S P WL WEAP AK I
Sbjct: 278 PESSILTKEILLELPKASDVAKSIGKMILT-SMFVPL--WLLKGIWEAPATAKIIIGSIA 334
Query: 311 FSVLP 297
LP
Sbjct: 335 DVTLP 339
>SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 528
Score = 25.0 bits (52), Expect = 8.4
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -2
Query: 584 SRACWEMTRAFSSR*VSMSAPAS 516
+RA WEMT + + VS SA AS
Sbjct: 78 TRAVWEMTDPYKTLGVSKSASAS 100
>SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1337
Score = 25.0 bits (52), Expect = 8.4
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -3
Query: 349 HRQWRSTQLPSSCSQSYQHQTH 284
H Q S+ SS SQS QH TH
Sbjct: 128 HSQNPSSSSSSSSSQSSQHSTH 149
>SPAC10F6.02c |prp22||ATP-dependent RNA helicase
Prp22|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1168
Score = 25.0 bits (52), Expect = 8.4
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +1
Query: 259 ENQSMLITGESGAGKTENTKKVIA 330
+NQ +++ GE+G+GKT + +A
Sbjct: 525 KNQILVLLGETGSGKTTQITQYLA 548
>SPBC30D10.16 |pha2||phrenate dehydratase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 287
Score = 25.0 bits (52), Expect = 8.4
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = -2
Query: 533 MSAPASFPDGPKWIRMNLPKREELSLRT---VLALPNASSTGLV 411
+S P +F KWI N+P E +S+ + AL + TG +
Sbjct: 116 LSHPQAFGQCSKWISANVPNAEFVSVSSTSQAAALASKDITGTI 159
>SPCC18B5.03 |wee1||dual specificity protein kinase
Wee1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 877
Score = 25.0 bits (52), Expect = 8.4
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +2
Query: 125 STLTRDSPCTRHDAPSCTVASVVRKCHLTSSPFP--TALTSTC*PTTR 262
ST T P + + PS +S+ H TS+ FP +A +S PT R
Sbjct: 234 STSTPAPPNSNNANPSTLFSSIPSSRHTTSNHFPSNSAQSSLFSPTAR 281
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.133 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,363,258
Number of Sequences: 5004
Number of extensions: 46063
Number of successful extensions: 162
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 155
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 260219058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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