Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0976
(498 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g11150.1 68417.m01807 vacuolar ATP synthase subunit E / V-ATP... 94 5e-20
At3g08560.1 68416.m00993 vacuolar ATP synthase subunit E, putati... 89 2e-18
At1g64200.1 68414.m07273 vacuolar ATP synthase subunit E, putati... 79 1e-15
At3g02260.1 68416.m00207 auxin transport protein (BIG) nearly id... 29 1.3
At3g58810.2 68416.m06555 zinc transporter, putative similar to z... 28 3.0
At3g58810.1 68416.m06554 zinc transporter, putative similar to z... 28 3.0
At5g05400.1 68418.m00582 disease resistance protein (CC-NBS-LRR ... 28 4.0
At1g18270.1 68414.m02280 ketose-bisphosphate aldolase class-II f... 27 7.0
At5g58520.1 68418.m07328 protein kinase family protein contains ... 27 9.3
At5g55540.1 68418.m06919 expressed protein 27 9.3
At5g07140.1 68418.m00814 protein kinase family protein contains ... 27 9.3
>At4g11150.1 68417.m01807 vacuolar ATP synthase subunit E / V-ATPase
E subunit / vacuolar proton pump E subunit (VATE)
identical to SP|Q39258 Vacuolar ATP synthase subunit E
(EC 3.6.3.14) (V-ATPase E subunit) (Vacuolar proton pump
E subunit) {Arabidopsis thaliana}
Length = 230
Score = 93.9 bits (223), Expect = 5e-20
Identities = 54/153 (35%), Positives = 81/153 (52%)
Frame = +3
Query: 39 LSDAYVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXX 218
++D V +QI+ M+ FI Q FNIEK +LV+ ++ KI
Sbjct: 1 MNDGDVSRQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQDYEKKEK 60
Query: 219 XXXXXXXIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVTLIVQ 398
I S LN +R+KVL+ ++D V + D+A K L V +D Y +LL LIVQ
Sbjct: 61 QADVRKKIDYSMQLNASRIKVLQAQDDIVNAMKDQAAKDLLNVSRDEYAYKQLLKDLIVQ 120
Query: 399 ALFQLMEPTVTIRVRQTDKALVESLLGKAQQDY 497
L +L EP+V +R R+ D LVE++L A+++Y
Sbjct: 121 CLLRLKEPSVLLRCREEDLGLVEAVLDDAKEEY 153
>At3g08560.1 68416.m00993 vacuolar ATP synthase subunit E, putative
/ V-ATPase E subunit, putative / vacuolar proton pump E
subunit, putative similar to SP|Q39258 Vacuolar ATP
synthase subunit E (EC 3.6.3.14) (V-ATPase E subunit)
(Vacuolar proton pump E subunit) {Arabidopsis thaliana};
contains Pfam profile PF01991: ATP synthase (E/31 kDa)
subunit
Length = 235
Score = 88.6 bits (210), Expect = 2e-18
Identities = 50/153 (32%), Positives = 80/153 (52%)
Frame = +3
Query: 39 LSDAYVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXX 218
++DA V KQI+ M+ FI Q FNIE+ +L++ + K+
Sbjct: 1 MNDADVSKQIQQMVRFIRQEAEEKANEISISAEEEFNIERLQLLESAKRKLRQDYDRKLK 60
Query: 219 XXXXXXXIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVTLIVQ 398
I S LN +R+K L+ ++D V + D A K L V D Y +LL +LI++
Sbjct: 61 QVDIRKRIDYSTQLNASRIKYLQAQDDVVTAMKDSAAKDLLRVSNDKNNYKKLLKSLIIE 120
Query: 399 ALFQLMEPTVTIRVRQTDKALVESLLGKAQQDY 497
+L +L EP+V +R R+ DK +VES++ A++ Y
Sbjct: 121 SLLRLKEPSVLLRCREMDKKVVESVIEDAKRQY 153
>At1g64200.1 68414.m07273 vacuolar ATP synthase subunit E, putative
/ V-ATPase E subunit, putative / vacuolar proton pump E
subunit, putative similar to SP|Q39258 Vacuolar ATP
synthase subunit E (EC 3.6.3.14) (V-ATPase E subunit)
(Vacuolar proton pump E subunit) {Arabidopsis thaliana};
contains Pfam profile PF01991: ATP synthase (E/31 kDa)
subunit
Length = 237
Score = 79.4 bits (187), Expect = 1e-15
Identities = 53/159 (33%), Positives = 78/159 (49%), Gaps = 6/159 (3%)
Frame = +3
Query: 39 LSDAYVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXX 218
++DA QI+ M+ FI Q FNIEK +LV+ ++ KI
Sbjct: 1 MNDADASIQIQQMVRFIRQEAEEKANEISISSEEEFNIEKLQLVEAEKKKIRQEYEKKEK 60
Query: 219 XXXXXXXIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKL------YSELL 380
I S LN +R+KVL+ ++D V + +EA K+L +V + Y LL
Sbjct: 61 QVDVRKKIDYSMQLNASRIKVLQAQDDIVNAMKEEAAKQLLKVSQHGFFNHHHHQYKHLL 120
Query: 381 VTLIVQALFQLMEPTVTIRVRQTDKALVESLLGKAQQDY 497
LIVQ L +L EP V +R R+ D +VES+L A ++Y
Sbjct: 121 KDLIVQCLLRLKEPAVLLRCREEDLDIVESMLDDASEEY 159
>At3g02260.1 68416.m00207 auxin transport protein (BIG) nearly
identical to auxin transport protein; BIG [Arabidopsis
thaliana] GI:21779966; contains Pfam profiles PF02207:
Putative zinc finger in N-recognin, PF00569: Zinc finger
ZZ type
Length = 5098
Score = 29.5 bits (63), Expect = 1.3
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +2
Query: 350 KGHQTVLRAAGHTYC-AGSLPAHGTHCHHPRPSNRQGSGGVPAR 478
+GH+ V + +C G+ G+ C +P G+G PAR
Sbjct: 1613 RGHRVVYSRSSRFFCDCGAGGVRGSSCQCLKPRKYNGNGSAPAR 1656
>At3g58810.2 68416.m06555 zinc transporter, putative similar to zinc
transporter 4; ZnT4 [Mus musculus]
gi|2582990|gb|AAB82593; similar to zinc transporter ZAT
[Arabidopsis thaliana] gi|4206640|gb|AAD11757; member of
the cation diffusion facilitator (CDF) family, or cation
efflux (CE) family, PMID:11500563
Length = 393
Score = 28.3 bits (60), Expect = 3.0
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -1
Query: 354 PLALQPGACELHQVHYVRDLHALSVPSDELGSAC 253
P L+ G CE+ +V V +LH ++ +L AC
Sbjct: 323 PTMLEKGVCEIEEVVAVHELHIWAITVGKLLLAC 356
>At3g58810.1 68416.m06554 zinc transporter, putative similar to zinc
transporter 4; ZnT4 [Mus musculus]
gi|2582990|gb|AAB82593; similar to zinc transporter ZAT
[Arabidopsis thaliana] gi|4206640|gb|AAD11757; member of
the cation diffusion facilitator (CDF) family, or cation
efflux (CE) family, PMID:11500563
Length = 432
Score = 28.3 bits (60), Expect = 3.0
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -1
Query: 354 PLALQPGACELHQVHYVRDLHALSVPSDELGSAC 253
P L+ G CE+ +V V +LH ++ +L AC
Sbjct: 362 PTMLEKGVCEIEEVVAVHELHIWAITVGKLLLAC 395
>At5g05400.1 68418.m00582 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 874
Score = 27.9 bits (59), Expect = 4.0
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +3
Query: 273 LKVLKVREDHVRNVLDEARKRLAEV 347
LK +KV+ED N+LDE ++ L+EV
Sbjct: 54 LKRIKVQEDRGLNLLDEVQQWLSEV 78
>At1g18270.1 68414.m02280 ketose-bisphosphate aldolase class-II
family protein low similarity to KbaY
(tagatose-1,6-bisphosphate aldolase) [Escherichia coli]
GI:8895753; contains Pfam profile PF01116:
Fructose-bisphosphate aldolase class-II
Length = 1373
Score = 27.1 bits (57), Expect = 7.0
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -1
Query: 357 CPLALQPGACELHQVHYVRDLHALSVPSDE 268
CP LQ G + VHYV D L VP+ E
Sbjct: 764 CPFFLQGGRYTIDDVHYVADSDRL-VPAGE 792
>At5g58520.1 68418.m07328 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 604
Score = 26.6 bits (56), Expect = 9.3
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -2
Query: 83 GHHVLDLFLNICIAERHGCCLFLTLV 6
GH + F +CI E HG C+ L+
Sbjct: 397 GHKSILQFYGVCIDENHGLCVVTKLM 422
>At5g55540.1 68418.m06919 expressed protein
Length = 1380
Score = 26.6 bits (56), Expect = 9.3
Identities = 14/47 (29%), Positives = 28/47 (59%)
Frame = +3
Query: 330 KRLAEVPKDTKLYSELLVTLIVQALFQLMEPTVTIRVRQTDKALVES 470
K AEV ++ + + +V+ +A+ Q M+P VTI + ++K ++S
Sbjct: 604 KTPAEVEEELEYWLRFIVSNSRKAIQQCMKPNVTIVLTHSEKINLQS 650
>At5g07140.1 68418.m00814 protein kinase family protein contains
eukaryotic protein kinase domain, INTERPRO:IPR000719
Length = 583
Score = 26.6 bits (56), Expect = 9.3
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -2
Query: 83 GHHVLDLFLNICIAERHGCCLFLTLV 6
GH + F +CI E HG C+ L+
Sbjct: 376 GHKSILQFYGVCIDENHGLCVVTKLM 401
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,429,249
Number of Sequences: 28952
Number of extensions: 168094
Number of successful extensions: 483
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 483
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 878448512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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