Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0974
(611 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57296| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 3e-13
SB_38402| Best HMM Match : DM (HMM E-Value=6.1e-19) 64 1e-10
SB_3737| Best HMM Match : DM (HMM E-Value=6.1e-19) 64 1e-10
SB_45214| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 6e-10
SB_47861| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_1163| Best HMM Match : DMA (HMM E-Value=1.4e-11) 50 2e-06
SB_21667| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_36522| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_22508| Best HMM Match : DM (HMM E-Value=8.1e-10) 42 4e-04
SB_27637| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_33902| Best HMM Match : Metallothionein (HMM E-Value=0.71) 29 2.2
SB_10026| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_26646| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_17985| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_9896| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_23015| Best HMM Match : WW (HMM E-Value=2.8e-16) 28 5.2
SB_6151| Best HMM Match : Extensin_2 (HMM E-Value=2.6) 28 5.2
SB_51803| Best HMM Match : Ion_trans_2 (HMM E-Value=2.3e-30) 28 6.9
SB_19076| Best HMM Match : HECT (HMM E-Value=0) 28 6.9
SB_10374| Best HMM Match : Fibrinogen_BP (HMM E-Value=2.2) 28 6.9
SB_18928| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_56257| Best HMM Match : Extensin_2 (HMM E-Value=4.5) 27 9.1
SB_45724| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_42321| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
>SB_57296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 292
Score = 72.1 bits (169), Expect = 3e-13
Identities = 31/59 (52%), Positives = 40/59 (67%)
Frame = +2
Query: 140 SEPGASSSGVPRAPPNCARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 316
SE + + R+P CARCRNH + LKGHKRYC+++ CTC KC L +RQR+MA Q
Sbjct: 2 SESASGDENLIRSP-RCARCRNHGIVSYLKGHKRYCQWKDCTCTKCSLIIERQRLMAAQ 59
>SB_38402| Best HMM Match : DM (HMM E-Value=6.1e-19)
Length = 118
Score = 63.7 bits (148), Expect = 1e-10
Identities = 24/43 (55%), Positives = 31/43 (72%)
Frame = +2
Query: 182 PNCARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQRVMA 310
P CARCRNH + LKGHK YC+++ C C KC L A+RQ++ A
Sbjct: 12 PKCARCRNHGVCSSLKGHKYYCRWRDCLCTKCLLIAERQKITA 54
>SB_3737| Best HMM Match : DM (HMM E-Value=6.1e-19)
Length = 312
Score = 63.7 bits (148), Expect = 1e-10
Identities = 24/43 (55%), Positives = 31/43 (72%)
Frame = +2
Query: 182 PNCARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQRVMA 310
P CARCRNH + LKGHK YC+++ C C KC L A+RQ++ A
Sbjct: 12 PKCARCRNHGVCSSLKGHKYYCRWRDCLCTKCLLIAERQKITA 54
>SB_45214| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 196
Score = 61.3 bits (142), Expect = 6e-10
Identities = 24/41 (58%), Positives = 28/41 (68%)
Frame = +2
Query: 188 CARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQRVMA 310
CARCRNH LKGHK YC++ CTC KC L +RQR+ A
Sbjct: 23 CARCRNHGALSWLKGHKHYCRWWDCTCSKCLLIVERQRITA 63
>SB_47861| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 59.7 bits (138), Expect = 2e-09
Identities = 21/60 (35%), Positives = 35/60 (58%)
Frame = +2
Query: 131 EERSEPGASSSGVPRAPPNCARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQRVMA 310
EE + + + P C RCRNH + +L+GHK C+++ C C +C + A+RQ++ A
Sbjct: 3 EEALDSPLDKNHLSNRTPKCTRCRNHGILSDLRGHKHQCRFKDCACNECMIVAERQKLTA 62
>SB_1163| Best HMM Match : DMA (HMM E-Value=1.4e-11)
Length = 403
Score = 49.6 bits (113), Expect = 2e-06
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = +2
Query: 224 LKGHKRYCKYQHCTCEKCRLTADRQRVMA 310
LKGHK YC+++ CTC KC+L +RQRV A
Sbjct: 34 LKGHKHYCRWRDCTCSKCQLITERQRVTA 62
>SB_21667| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 812
Score = 46.4 bits (105), Expect = 2e-05
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = +2
Query: 233 HKRYCKYQHCTCEKCRLTADRQRVMAKQ 316
HKRYC+++ C C +C L A+RQRVMA Q
Sbjct: 358 HKRYCRWRDCNCAQCTLIAERQRVMAAQ 385
>SB_36522| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 46.0 bits (104), Expect = 2e-05
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +2
Query: 203 NHRLKIELKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 316
NH ++ ELKGHK C Y C CE C +R+ +M KQ
Sbjct: 267 NHGIRSELKGHKYNCPYSSCKCELCDRGRERREIMRKQ 304
>SB_22508| Best HMM Match : DM (HMM E-Value=8.1e-10)
Length = 450
Score = 41.9 bits (94), Expect = 4e-04
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +2
Query: 188 CARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 316
C +CR+H L+GHKR C Y C C C DRQ + +K+
Sbjct: 194 CRKCRSHGKITPLEGHKRNCPYIKCDCLSC-TRLDRQNLASKK 235
>SB_27637| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 287
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/56 (25%), Positives = 22/56 (39%)
Frame = +1
Query: 280 PYRRQAAGNGKANGNQTGPGSGRSACACAGIRNTAPGAGVG*ACTTSGEGATQPHD 447
PY +G NGN+T +A GI ++ P T G+ + +D
Sbjct: 213 PYENDGDNDGHTNGNKTNTNGNETAVHNVGIASSLPELAASDDVTAEGKTVSDAND 268
>SB_33902| Best HMM Match : Metallothionein (HMM E-Value=0.71)
Length = 361
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +2
Query: 146 PGASSSGVPRAPPNCARCRNHRLKIELKGHKRYCKYQHCTCEKCRL 283
P +GVP AP +K +G KR CK Q C+C + RL
Sbjct: 291 PTTVPTGVPLAPDEILPL----IKCNYEGDKR-CKTQRCSCSRARL 331
>SB_10026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 408
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 280 PYRRQAAGNGKANGNQTGPGSGRSACACAGIRNTAPGAGVG 402
P +R A N + + PG+G+ C+ AG + G GVG
Sbjct: 352 PCQRSADQNPYSTQRDSQPGAGKYPCSDAGCHRHSMGNGVG 392
>SB_26646| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +1
Query: 301 GNGKANGNQTGPGSGRSACACAGIRNTAPGAG 396
G G NG G G G C C G + G G
Sbjct: 40 GGGGGNGGGAGNGVGAGGCGCGGGNDGGNGGG 71
>SB_17985| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 818
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 401 DRPVPPVVKAPRSPMIPPSAPRSLGSAS 484
D P P++ P IPP +P SL +AS
Sbjct: 510 DNPGSPLIPTPSFEPIPPPSPTSLANAS 537
>SB_9896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +2
Query: 383 PPGLELDRPVPPVVKAPRSPMIPPSAPRSLGSASCD 490
PPG P PP P +P PP+ P G + D
Sbjct: 183 PPGAPAAPPAPPFGGPPSAPPPPPAPPVGGGGSLAD 218
>SB_23015| Best HMM Match : WW (HMM E-Value=2.8e-16)
Length = 678
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 383 PPGLELDRPVPPVVKAPRSPMIPPSAP 463
PPG+++ P+PP + P+ P PP P
Sbjct: 558 PPGVDIPPPLPP-SEDPKPPPPPPEPP 583
>SB_6151| Best HMM Match : Extensin_2 (HMM E-Value=2.6)
Length = 287
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -1
Query: 434 VAPSPLVVQAYPTPAPGAVFLIPAHAHALRPEP 336
V+P P Q +P PA V IPAHA + P P
Sbjct: 218 VSPIPAHTQVHPIPAHAQVDPIPAHAQ-VNPIP 249
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = -1
Query: 434 VAPSPLVVQAYPTPAPGAVFLIPAHA 357
V P+P Q PTPA V IPAHA
Sbjct: 164 VNPTPEHAQVNPTPAHAQVNPIPAHA 189
>SB_51803| Best HMM Match : Ion_trans_2 (HMM E-Value=2.3e-30)
Length = 823
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/53 (30%), Positives = 21/53 (39%)
Frame = +2
Query: 113 RVPDDCEERSEPGASSSGVPRAPPNCARCRNHRLKIELKGHKRYCKYQHCTCE 271
R+ D S G S + P+ A CR + GH RY + Q CE
Sbjct: 516 RIEDRFSISSASGTHSHSATYSEPDEASCRRYSRGDIDNGHTRYERRQRSVCE 568
>SB_19076| Best HMM Match : HECT (HMM E-Value=0)
Length = 2018
Score = 27.9 bits (59), Expect = 6.9
Identities = 18/55 (32%), Positives = 23/55 (41%)
Frame = -1
Query: 173 EERPNWRRRVRNAPRSHRARGVSMSPSTPLLGPRRPYTRQSWRVLLHTRNTTLVP 9
EE +R +R+ R R M PST P R++ HT NT VP
Sbjct: 770 EEARIAKRFIRSVARVFVVRASEMPPSTVKRRPSFMQPLAKCRLVFHTLNTLAVP 824
>SB_10374| Best HMM Match : Fibrinogen_BP (HMM E-Value=2.2)
Length = 707
Score = 27.9 bits (59), Expect = 6.9
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1
Query: 166 RSSCPS*LCALPQSQAQDR 222
+SSCP+ CA+P S+A+ R
Sbjct: 219 KSSCPTQQCAIPSSEARSR 237
>SB_18928| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -2
Query: 346 VLSLGPSDCRLLCHYPLPVCGKAALFTSAMLIFAVPLV 233
VL++ C LL HYP+ G + T+A I P+V
Sbjct: 91 VLTVSVQYCDLLIHYPITNHGINLIGTTAQSILCQPIV 128
>SB_56257| Best HMM Match : Extensin_2 (HMM E-Value=4.5)
Length = 304
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/68 (23%), Positives = 27/68 (39%)
Frame = -2
Query: 409 RPIQLQPRGLYS*FQRTRTRFVLSLGPSDCRLLCHYPLPVCGKAALFTSAMLIFAVPLVT 230
RP+ +P Y + + + P D + YP+ C K A A + A P+
Sbjct: 84 RPMDARPMDAYPMDACPKDAYTMEACPVDACPMDAYPMDACPKEACPVEACPVDACPMDA 143
Query: 229 LELDLEPV 206
+D P+
Sbjct: 144 YPVDAYPM 151
>SB_45724| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -1
Query: 425 SPLVVQAYPTPAPGAVFLIPAHAHALRPEPGP 330
+PLV+ A+P A PAH H LRP P P
Sbjct: 57 APLVIWAHPEHL--AFQGPPAHQHLLRPTPPP 86
>SB_42321| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 648
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1
Query: 173 EERPNWRRRVRNAPRSHRARGVSMSPSTP 87
++R +W V + PR A GV PSTP
Sbjct: 553 KKRKHWNNHVDDYPRKGHACGVMGRPSTP 581
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,338,867
Number of Sequences: 59808
Number of extensions: 419864
Number of successful extensions: 1874
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1859
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1499981500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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