Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0974
(611 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69883-5|CAA93739.2| 260|Caenorhabditis elegans Hypothetical pr... 78 6e-15
U49831-8|AAA93409.2| 280|Caenorhabditis elegans Hypothetical pr... 72 4e-13
AL032637-20|CAA21612.2| 250|Caenorhabditis elegans Hypothetical... 60 9e-10
Z99278-5|CAB16489.1| 290|Caenorhabditis elegans Hypothetical pr... 48 4e-06
AF022388-1|AAC38956.1| 290|Caenorhabditis elegans putative tran... 48 4e-06
AF101315-1|AAC69225.2| 369|Caenorhabditis elegans Hypothetical ... 45 4e-05
Z78060-1|CAB01491.1| 83|Caenorhabditis elegans Hypothetical pr... 45 5e-05
Z78060-2|CAB01490.1| 114|Caenorhabditis elegans Hypothetical pr... 44 7e-05
U97001-3|AAB52258.2| 449|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z73905-5|CAD44103.1| 175|Caenorhabditis elegans Hypothetical pr... 38 0.007
AF535153-1|AAN17799.1| 175|Caenorhabditis elegans putative tran... 38 0.007
Z83317-2|CAB05899.1| 470|Caenorhabditis elegans Hypothetical pr... 36 0.030
Z83317-1|CAB05898.1| 510|Caenorhabditis elegans Hypothetical pr... 36 0.030
AC024848-5|AAK68545.1| 254|Caenorhabditis elegans Hypothetical ... 35 0.040
AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen prot... 32 0.28
AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein. 31 0.86
AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor o... 31 0.86
AC006768-3|AAK70665.1| 246|Caenorhabditis elegans Hypothetical ... 30 1.5
AC006768-2|AAF60574.1| 309|Caenorhabditis elegans Hypothetical ... 30 1.5
Z83222-1|CAB05712.1| 410|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical pr... 28 4.6
U61288-1|AAB17543.1| 790|Caenorhabditis elegans CE protein. 28 4.6
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 28 4.6
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 28 4.6
AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical ... 28 6.0
Z67881-3|CAD44099.1| 1405|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z50797-11|CAA90676.2| 1405|Caenorhabditis elegans Hypothetical p... 27 8.0
Z50797-9|CAL36516.1| 640|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z50797-8|CAL36515.1| 291|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z46996-3|CAA87100.2| 331|Caenorhabditis elegans Hypothetical pr... 27 8.0
U58753-9|AAC24441.2| 441|Caenorhabditis elegans Seryl trna synt... 27 8.0
U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical pr... 27 8.0
AB016796-1|BAA74732.1| 441|Caenorhabditis elegans Seryl-tRNA sy... 27 8.0
>Z69883-5|CAA93739.2| 260|Caenorhabditis elegans Hypothetical
protein C27C12.6 protein.
Length = 260
Score = 77.8 bits (183), Expect = 6e-15
Identities = 32/45 (71%), Positives = 35/45 (77%)
Frame = +2
Query: 182 PNCARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 316
P CARCRNH L LKGHKR+CKY+ C CEKC L A+RQRVMA Q
Sbjct: 20 PKCARCRNHGLVSWLKGHKRHCKYKECACEKCNLIAERQRVMAAQ 64
>U49831-8|AAA93409.2| 280|Caenorhabditis elegans Hypothetical
protein F10C1.5 protein.
Length = 280
Score = 71.7 bits (168), Expect = 4e-13
Identities = 29/45 (64%), Positives = 33/45 (73%)
Frame = +2
Query: 182 PNCARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 316
P CARCRNH LKGHKRYC+++ C C KC L A+RQRVMA Q
Sbjct: 31 PKCARCRNHGTTSALKGHKRYCQWKDCMCAKCTLIAERQRVMAAQ 75
>AL032637-20|CAA21612.2| 250|Caenorhabditis elegans Hypothetical
protein Y43F8C.10 protein.
Length = 250
Score = 60.5 bits (140), Expect = 9e-10
Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Frame = +2
Query: 125 DCEERSEPGASSSGVPRAP-------PNCARCRNHRLKIELKGHKRYCKYQHCTCEKCRL 283
+C +SE SSG + PNC RC H + LKGHKR C ++ C C KC++
Sbjct: 89 ECTSQSETTNESSGEDKDDGKPKERRPNCQRCAQHSVVNRLKGHKRACPFRDCFCAKCQV 148
Query: 284 TADRQRVMAKQ 316
+RQ++MA Q
Sbjct: 149 VVERQKLMADQ 159
Score = 40.3 bits (90), Expect = 0.001
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +2
Query: 188 CARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQRVMAK 313
C RC NH L+ + K HK C ++ C C C + R+++ ++
Sbjct: 19 CQRCLNHGLREKRKNHKLSCTFRFCQCSNCIMVERRRQLNSR 60
>Z99278-5|CAB16489.1| 290|Caenorhabditis elegans Hypothetical
protein Y53C12B.5a protein.
Length = 290
Score = 48.4 bits (110), Expect = 4e-06
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +2
Query: 182 PNCARCRNHRLKIELKGHKR-YCKYQHCTCEKCRLTADRQRVMAKQ 316
P+CARC H + + L+GHKR C++ C C C L R+ +MA Q
Sbjct: 92 PHCARCSAHGVLVPLRGHKRTMCQFVTCECTLCTLVEHRRNLMAAQ 137
Score = 40.3 bits (90), Expect = 0.001
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 188 CARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQRV 304
C RC NH KGHK C+Y C C +C + R+++
Sbjct: 28 CQRCLNHGELKPRKGHKPDCRYLKCPCRECTMVEQRRQL 66
>AF022388-1|AAC38956.1| 290|Caenorhabditis elegans putative
transcription factor MAB-3 protein.
Length = 290
Score = 48.4 bits (110), Expect = 4e-06
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +2
Query: 182 PNCARCRNHRLKIELKGHKR-YCKYQHCTCEKCRLTADRQRVMAKQ 316
P+CARC H + + L+GHKR C++ C C C L R+ +MA Q
Sbjct: 92 PHCARCSAHGVLVPLRGHKRTMCQFVTCECTLCTLVEHRRNLMAAQ 137
Score = 40.3 bits (90), Expect = 0.001
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 188 CARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQRV 304
C RC NH KGHK C+Y C C +C + R+++
Sbjct: 28 CQRCLNHGELKPRKGHKPDCRYLKCPCRECTMVEQRRQL 66
>AF101315-1|AAC69225.2| 369|Caenorhabditis elegans Hypothetical
protein T22H9.4 protein.
Length = 369
Score = 45.2 bits (102), Expect = 4e-05
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +2
Query: 188 CARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQ 298
C +C+NH + + K HK+ C+Y C C++C L R+
Sbjct: 137 CQKCKNHNVLVWKKNHKKECQYSSCECQQCNLIDSRR 173
Score = 44.8 bits (101), Expect = 5e-05
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +2
Query: 185 NCARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 316
+C C+ H + +E +GH C+Y+ C CE+C L R+ +M+ Q
Sbjct: 50 HCGMCKQHGVFVETRGHT--CEYRSCECEQCDLVRKRREIMSTQ 91
>Z78060-1|CAB01491.1| 83|Caenorhabditis elegans Hypothetical
protein C34D1.1 protein.
Length = 83
Score = 44.8 bits (101), Expect = 5e-05
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +2
Query: 182 PNCARCRNHRLKIELKGHKRYCKYQHCTCEK 274
PNC +C H K LKGHKR C ++ C C K
Sbjct: 38 PNCQKCGQHGRKSRLKGHKRSCPFRECPCAK 68
>Z78060-2|CAB01490.1| 114|Caenorhabditis elegans Hypothetical
protein C34D1.2 protein.
Length = 114
Score = 44.4 bits (100), Expect = 7e-05
Identities = 18/37 (48%), Positives = 20/37 (54%)
Frame = +2
Query: 188 CARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQ 298
C RC NH + K HK C Y CTCEKC L R+
Sbjct: 43 CQRCLNHDVPRPRKNHKCECPYADCTCEKCGLVEKRR 79
>U97001-3|AAB52258.2| 449|Caenorhabditis elegans Hypothetical
protein K08B12.2a protein.
Length = 449
Score = 37.9 bits (84), Expect = 0.006
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 188 CARCRNHRLKIELKGHKRYCKYQHCTCEKC 277
C +C H ++ LKGH C + +C+C+ C
Sbjct: 61 CRKCEGHGQQVVLKGHASRCPFNNCSCKTC 90
>Z73905-5|CAD44103.1| 175|Caenorhabditis elegans Hypothetical
protein C32C4.5a protein.
Length = 175
Score = 37.5 bits (83), Expect = 0.007
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +2
Query: 167 VPRAPPNCARCRNHRLKIE-LKGHKRYCKYQHCTCEKCRLTADRQ 298
+P+ C C NH + + KGHK+ C Y+ C C C L R+
Sbjct: 1 MPKEQYMCQLCANHGIFNQPKKGHKQKCPYRTCPCSLCALNTKRR 45
>AF535153-1|AAN17799.1| 175|Caenorhabditis elegans putative
transcription factor MAB-23 protein.
Length = 175
Score = 37.5 bits (83), Expect = 0.007
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +2
Query: 167 VPRAPPNCARCRNHRLKIE-LKGHKRYCKYQHCTCEKCRLTADRQ 298
+P+ C C NH + + KGHK+ C Y+ C C C L R+
Sbjct: 1 MPKEQYMCQLCANHGIFNQPKKGHKQKCPYRTCPCSLCALNTKRR 45
>Z83317-2|CAB05899.1| 470|Caenorhabditis elegans Hypothetical
protein F13G11.1b protein.
Length = 470
Score = 35.5 bits (78), Expect = 0.030
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +2
Query: 188 CARCRNHRLKIELKGHKRYCKYQHCTCEKC 277
C +C H K+ LK H C Y C C+ C
Sbjct: 45 CRKCEGHGEKVILKNHSPQCPYILCNCKSC 74
>Z83317-1|CAB05898.1| 510|Caenorhabditis elegans Hypothetical
protein F13G11.1a protein.
Length = 510
Score = 35.5 bits (78), Expect = 0.030
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +2
Query: 188 CARCRNHRLKIELKGHKRYCKYQHCTCEKC 277
C +C H K+ LK H C Y C C+ C
Sbjct: 85 CRKCEGHGEKVILKNHSPQCPYILCNCKSC 114
>AC024848-5|AAK68545.1| 254|Caenorhabditis elegans Hypothetical
protein Y67D8A.3 protein.
Length = 254
Score = 35.1 bits (77), Expect = 0.040
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +2
Query: 188 CARCRNHRLKIELKGHKRYCKYQHCTCEKC 277
C +C H LKGH C Y+ C+C C
Sbjct: 31 CRKCEGHGTYAILKGHAGVCPYKDCSCGTC 60
>AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen protein
101 protein.
Length = 314
Score = 32.3 bits (70), Expect = 0.28
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +1
Query: 286 RRQAAGNGKANGNQTGPGSGRSACACAGIRNTAPGAGVG*ACTTSGEGA 432
RRQ+ G+ A+G + GSG +C G+ + P G +GA
Sbjct: 97 RRQSYGDSGASGGFSSGGSGGGSCCSCGVGSAGPAGSPGQDGAPGNDGA 145
>AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.
Length = 1475
Score = 30.7 bits (66), Expect = 0.86
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = +1
Query: 271 KVPPYRRQAAGNGKANGNQTGPGSGRSACACAGIRNTAPGAG 396
K P AG GK G + G G+G A AG R +A GAG
Sbjct: 701 KKQPGEEPPAGRGK--GGKKGRGAGAVGAAAAGGRKSAGGAG 740
>AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor of
pal-1 protein 3,isoform a protein.
Length = 1475
Score = 30.7 bits (66), Expect = 0.86
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = +1
Query: 271 KVPPYRRQAAGNGKANGNQTGPGSGRSACACAGIRNTAPGAG 396
K P AG GK G + G G+G A AG R +A GAG
Sbjct: 701 KKQPGEEPPAGRGK--GGKKGRGAGAVGAAAAGGRKSAGGAG 740
>AC006768-3|AAK70665.1| 246|Caenorhabditis elegans Hypothetical
protein Y45G12B.2b protein.
Length = 246
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 45 APTLPRIRPTRTQQ-WCRWAHGNAACPMTARSVPNPAPP 158
+P + ++R Q W R A G P R VP+PAPP
Sbjct: 49 SPLIEKLREQLKQSNWARAALGLPTLPELNRPVPSPAPP 87
>AC006768-2|AAF60574.1| 309|Caenorhabditis elegans Hypothetical
protein Y45G12B.2a protein.
Length = 309
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 45 APTLPRIRPTRTQQ-WCRWAHGNAACPMTARSVPNPAPP 158
+P + ++R Q W R A G P R VP+PAPP
Sbjct: 112 SPLIEKLREQLKQSNWARAALGLPTLPELNRPVPSPAPP 150
>Z83222-1|CAB05712.1| 410|Caenorhabditis elegans Hypothetical
protein E01B7.1 protein.
Length = 410
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +2
Query: 386 PGLELDRPVPPVVKAPRSPMIPPSAPRS 469
P L +PPV R PMIPPS P S
Sbjct: 348 PALNRQSTIPPVAMTQR-PMIPPSLPSS 374
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 28.3 bits (60), Expect = 4.6
Identities = 17/34 (50%), Positives = 18/34 (52%)
Frame = +1
Query: 301 GNGKANGNQTGPGSGRSACACAGIRNTAPGAGVG 402
GNG GN G G+G A AG N A GAG G
Sbjct: 854 GNGAGAGNGNGAGAGNGNGAGAGNGNGA-GAGNG 886
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/46 (39%), Positives = 20/46 (43%)
Frame = +1
Query: 301 GNGKANGNQTGPGSGRSACACAGIRNTAPGAGVG*ACTTSGEGATQ 438
GNG GN G G+G A AG N GAG G A + Q
Sbjct: 862 GNGAGAGNGNGAGAGNGNGAGAGNGN---GAGAGDASAAAAAAQAQ 904
>Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical
protein R08B4.1a protein.
Length = 1137
Score = 28.3 bits (60), Expect = 4.6
Identities = 17/34 (50%), Positives = 18/34 (52%)
Frame = +1
Query: 301 GNGKANGNQTGPGSGRSACACAGIRNTAPGAGVG 402
GNG GN G G+G A AG N A GAG G
Sbjct: 831 GNGAGAGNGNGAGAGNGNGAGAGNGNGA-GAGNG 863
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/46 (39%), Positives = 20/46 (43%)
Frame = +1
Query: 301 GNGKANGNQTGPGSGRSACACAGIRNTAPGAGVG*ACTTSGEGATQ 438
GNG GN G G+G A AG N GAG G A + Q
Sbjct: 839 GNGAGAGNGNGAGAGNGNGAGAGNGN---GAGAGDASAAAAAAQAQ 881
>U61288-1|AAB17543.1| 790|Caenorhabditis elegans CE protein.
Length = 790
Score = 28.3 bits (60), Expect = 4.6
Identities = 17/34 (50%), Positives = 18/34 (52%)
Frame = +1
Query: 301 GNGKANGNQTGPGSGRSACACAGIRNTAPGAGVG 402
GNG GN G G+G A AG N A GAG G
Sbjct: 484 GNGAGAGNGNGAGAGNGNGAGAGNGNGA-GAGNG 516
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/46 (39%), Positives = 20/46 (43%)
Frame = +1
Query: 301 GNGKANGNQTGPGSGRSACACAGIRNTAPGAGVG*ACTTSGEGATQ 438
GNG GN G G+G A AG N GAG G A + Q
Sbjct: 492 GNGAGAGNGNGAGAGNGNGAGAGNGN---GAGAGDASAAAAAAQAQ 534
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 301 GNGKANGNQTGPGSGRSACACAGI-RNTAPGAGVG*ACTTSGEGA 432
G+G+++G +G GSG S+ +G A G G G A SGEG+
Sbjct: 78 GSGESSGETSGEGSGESSGEASGEGSGEASGEGSGEA---SGEGS 119
Score = 27.5 bits (58), Expect = 8.0
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +1
Query: 304 NGKANGNQTGPGSGRSACACAGIRNTAPGAGV 399
+G+A+G Q+G GSG ++ +G ++ G+GV
Sbjct: 367 SGEASGEQSGEGSGEASGEASG-ESSGEGSGV 397
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 301 GNGKANGNQTGPGSGRSACACAGI-RNTAPGAGVG*ACTTSGEGA 432
G+G+++G +G GSG S+ +G A G G G A SGEG+
Sbjct: 78 GSGESSGETSGEGSGESSGEASGEGSGEASGEGSGEA---SGEGS 119
Score = 27.5 bits (58), Expect = 8.0
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +1
Query: 304 NGKANGNQTGPGSGRSACACAGIRNTAPGAGV 399
+G+A+G Q+G GSG ++ +G ++ G+GV
Sbjct: 367 SGEASGEQSGEGSGEASGEASG-ESSGEGSGV 397
>AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical
protein Y54E2A.8 protein.
Length = 485
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 380 QPPGLELDRPVPPVVKAPRSPMIPPSAP 463
QPP + PVP + P P +PP +P
Sbjct: 152 QPPPTPIPTPVPILEPPPPPPPVPPLSP 179
>Z67881-3|CAD44099.1| 1405|Caenorhabditis elegans Hypothetical protein
T22H6.6a protein.
Length = 1405
Score = 27.5 bits (58), Expect = 8.0
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = -1
Query: 428 PSPLVVQAYPTPAPGAVFLIPAHAHALRPEP 336
PSP VV+ PT P A FL P L+P P
Sbjct: 1150 PSPNVVR--PTIIPTAQFLAPTQQFVLQPTP 1178
>Z50797-11|CAA90676.2| 1405|Caenorhabditis elegans Hypothetical
protein T22H6.6a protein.
Length = 1405
Score = 27.5 bits (58), Expect = 8.0
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = -1
Query: 428 PSPLVVQAYPTPAPGAVFLIPAHAHALRPEP 336
PSP VV+ PT P A FL P L+P P
Sbjct: 1150 PSPNVVR--PTIIPTAQFLAPTQQFVLQPTP 1178
>Z50797-9|CAL36516.1| 640|Caenorhabditis elegans Hypothetical
protein T22H6.6b protein.
Length = 640
Score = 27.5 bits (58), Expect = 8.0
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = -1
Query: 428 PSPLVVQAYPTPAPGAVFLIPAHAHALRPEP 336
PSP VV+ PT P A FL P L+P P
Sbjct: 385 PSPNVVR--PTIIPTAQFLAPTQQFVLQPTP 413
>Z50797-8|CAL36515.1| 291|Caenorhabditis elegans Hypothetical
protein T22H6.6c protein.
Length = 291
Score = 27.5 bits (58), Expect = 8.0
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = -1
Query: 428 PSPLVVQAYPTPAPGAVFLIPAHAHALRPEP 336
PSP VV+ PT P A FL P L+P P
Sbjct: 36 PSPNVVR--PTIIPTAQFLAPTQQFVLQPTP 64
>Z46996-3|CAA87100.2| 331|Caenorhabditis elegans Hypothetical
protein C34C12.3 protein.
Length = 331
Score = 27.5 bits (58), Expect = 8.0
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +2
Query: 176 APPNCARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADR 295
AP C RC N E+ G+ R KY + + R DR
Sbjct: 285 APNYCYRCGNAAAVFEIDGNNRSTKYFNAVPDGSREKPDR 324
>U58753-9|AAC24441.2| 441|Caenorhabditis elegans Seryl trna
synthetase protein 1 protein.
Length = 441
Score = 27.5 bits (58), Expect = 8.0
Identities = 17/58 (29%), Positives = 24/58 (41%)
Frame = +2
Query: 146 PGASSSGVPRAPPNCARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQRVMAKQT 319
PG G + NC ++ RL I+ K KY H TC L + R + +T
Sbjct: 350 PGRKLYGEVSSASNCTDFQSRRLGIKYKTADGTTKYAH-TCNGTALASTRALISVLET 406
>U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical
protein T19A5.3a protein.
Length = 715
Score = 27.5 bits (58), Expect = 8.0
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = -3
Query: 462 GADGGIMGLRGAFTTGGTGLSNSSP-GGCIPN 370
G GG G G F GG G + SP GG P+
Sbjct: 484 GGGGGFGGGGGGFGGGGGGFGSGSPFGGAAPS 515
>AB016796-1|BAA74732.1| 441|Caenorhabditis elegans Seryl-tRNA
synthetase protein.
Length = 441
Score = 27.5 bits (58), Expect = 8.0
Identities = 17/58 (29%), Positives = 24/58 (41%)
Frame = +2
Query: 146 PGASSSGVPRAPPNCARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQRVMAKQT 319
PG G + NC ++ RL I+ K KY H TC L + R + +T
Sbjct: 350 PGRKLYGEVSSASNCTDFQSRRLGIKYKTADGTTKYAH-TCNGTALASTRALISVLET 406
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,411,401
Number of Sequences: 27780
Number of extensions: 290672
Number of successful extensions: 1465
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1422
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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