BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= P5PG0974 (611 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein. 36 4e-04 AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 26 0.25 AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 25 0.77 DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 22 4.1 AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 4.1 DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 22 5.4 DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 22 5.4 DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 22 5.4 DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 22 5.4 DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 22 5.4 DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 22 5.4 DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 22 5.4 DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 22 5.4 DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 22 5.4 DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 22 5.4 DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 22 5.4 AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 5.4 AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 5.4 DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 21 9.5 DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 21 9.5 >AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein. Length = 147 Score = 35.5 bits (78), Expect = 4e-04 Identities = 12/17 (70%), Positives = 17/17 (100%) Frame = +2 Query: 257 HCTCEKCRLTADRQRVM 307 +CTCEKC++TA+RQ+VM Sbjct: 3 YCTCEKCKITANRQQVM 19 >AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein protein. Length = 352 Score = 26.2 bits (55), Expect = 0.25 Identities = 14/44 (31%), Positives = 19/44 (43%) Frame = +1 Query: 271 KVPPYRRQAAGNGKANGNQTGPGSGRSACACAGIRNTAPGAGVG 402 + PPY R N +Q GSG G R+ +P G+G Sbjct: 79 RFPPYNRMDMRNATYYQHQQDHGSGMD--GMGGYRSASPSPGMG 120 >AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor protein. Length = 587 Score = 24.6 bits (51), Expect = 0.77 Identities = 10/24 (41%), Positives = 17/24 (70%) Frame = +2 Query: 155 SSSGVPRAPPNCARCRNHRLKIEL 226 S++G PR+P + +RC R KI++ Sbjct: 318 SNNGSPRSPESNSRCSVKREKIKI 341 >DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex determiner protein. Length = 185 Score = 22.2 bits (45), Expect = 4.1 Identities = 9/25 (36%), Positives = 15/25 (60%) Frame = +2 Query: 227 KGHKRYCKYQHCTCEKCRLTADRQR 301 K + Y KY+ + E+ R A+R+R Sbjct: 50 KNEREYRKYRETSKERSRDRAERER 74 >AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex determiner protein. Length = 428 Score = 22.2 bits (45), Expect = 4.1 Identities = 10/35 (28%), Positives = 16/35 (45%) Frame = +2 Query: 197 CRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQR 301 C R + K Y KY+ + E+ R +R+R Sbjct: 274 CSREREQKSYKNENSYRKYRETSKERSRDRTERER 308 >DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.8 bits (44), Expect = 5.4 Identities = 11/37 (29%), Positives = 19/37 (51%) Frame = +2 Query: 191 ARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQR 301 +R R K+ K + Y KY+ + E+ R +R+R Sbjct: 40 SRSREREQKL-YKNKREYRKYRETSKERSRNRTERER 75 >DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex determiner protein. Length = 185 Score = 21.8 bits (44), Expect = 5.4 Identities = 11/37 (29%), Positives = 19/37 (51%) Frame = +2 Query: 191 ARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQR 301 +R R K+ K + Y KY+ + E+ R +R+R Sbjct: 40 SRSREREQKL-YKNKREYRKYRETSKERSRNRTERER 75 >DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex determiner protein. Length = 189 Score = 21.8 bits (44), Expect = 5.4 Identities = 9/25 (36%), Positives = 14/25 (56%) Frame = +2 Query: 227 KGHKRYCKYQHCTCEKCRLTADRQR 301 K K Y KY+ + E+ R +R+R Sbjct: 51 KNEKEYRKYRETSKERSRDRTERER 75 >DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.8 bits (44), Expect = 5.4 Identities = 11/37 (29%), Positives = 19/37 (51%) Frame = +2 Query: 191 ARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQR 301 +R R K+ K + Y KY+ + E+ R +R+R Sbjct: 40 SRSREREQKL-YKNKREYRKYRETSKERSRNRTERER 75 >DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.8 bits (44), Expect = 5.4 Identities = 11/37 (29%), Positives = 19/37 (51%) Frame = +2 Query: 191 ARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQR 301 +R R K+ K + Y KY+ + E+ R +R+R Sbjct: 40 SRSREREQKL-YKNKREYRKYRETSKERSRNRTERER 75 >DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.8 bits (44), Expect = 5.4 Identities = 11/37 (29%), Positives = 19/37 (51%) Frame = +2 Query: 191 ARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQR 301 +R R K+ K + Y KY+ + E+ R +R+R Sbjct: 40 SRSREREQKL-YKNKREYRKYRETSKERSRNRTERER 75 >DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.8 bits (44), Expect = 5.4 Identities = 11/37 (29%), Positives = 19/37 (51%) Frame = +2 Query: 191 ARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQR 301 +R R K+ K + Y KY+ + E+ R +R+R Sbjct: 40 SRSREREQKL-YKNKREYRKYRETSKERSRNRTERER 75 >DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.8 bits (44), Expect = 5.4 Identities = 11/37 (29%), Positives = 19/37 (51%) Frame = +2 Query: 191 ARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQR 301 +R R K+ K + Y KY+ + E+ R +R+R Sbjct: 40 SRSREREQKL-YKNKREYRKYRETSKERSRNRTERER 75 >DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.8 bits (44), Expect = 5.4 Identities = 11/37 (29%), Positives = 19/37 (51%) Frame = +2 Query: 191 ARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQR 301 +R R K+ K + Y KY+ + E+ R +R+R Sbjct: 40 SRSREREQKL-YKNKREYRKYRETSKERSRNRTERER 75 >DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.8 bits (44), Expect = 5.4 Identities = 11/37 (29%), Positives = 19/37 (51%) Frame = +2 Query: 191 ARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQR 301 +R R K+ K + Y KY+ + E+ R +R+R Sbjct: 40 SRSREREQKL-YKNKREYRKYRETSKERSRNRTERER 75 >DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.8 bits (44), Expect = 5.4 Identities = 11/37 (29%), Positives = 19/37 (51%) Frame = +2 Query: 191 ARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQR 301 +R R K+ K + Y KY+ + E+ R +R+R Sbjct: 40 SRSREREQKL-YKNKREYRKYRETSKERSRNRTERER 75 >AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex determiner protein. Length = 414 Score = 21.8 bits (44), Expect = 5.4 Identities = 11/37 (29%), Positives = 19/37 (51%) Frame = +2 Query: 191 ARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQR 301 +R R K+ K + Y KY+ + E+ R +R+R Sbjct: 273 SRSREREQKL-YKNKREYRKYRETSKERSRNRTERER 308 >AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex determiner protein. Length = 414 Score = 21.8 bits (44), Expect = 5.4 Identities = 11/37 (29%), Positives = 19/37 (51%) Frame = +2 Query: 191 ARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQR 301 +R R K+ K + Y KY+ + E+ R +R+R Sbjct: 273 SRSREREQKL-YKNKREYRKYRETSKERSRNRTERER 308 >DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.0 bits (42), Expect = 9.5 Identities = 11/37 (29%), Positives = 19/37 (51%) Frame = +2 Query: 191 ARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQR 301 +R R K K ++Y KY+ + E+ R +R+R Sbjct: 40 SRSREREQK-SYKNERKYRKYRERSKERSRDRTERER 75 >DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex determiner protein. Length = 191 Score = 21.0 bits (42), Expect = 9.5 Identities = 11/37 (29%), Positives = 19/37 (51%) Frame = +2 Query: 191 ARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQR 301 +R R K K ++Y KY+ + E+ R +R+R Sbjct: 40 SRSREREQK-SYKNERKYRKYRERSKERSRDRTERER 75 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 164,157 Number of Sequences: 438 Number of extensions: 3510 Number of successful extensions: 36 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 36 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 36 length of database: 146,343 effective HSP length: 55 effective length of database: 122,253 effective search space used: 18093444 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -