Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0973
(621 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 349 1e-97
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 341 7e-95
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 297 1e-81
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 274 5e-75
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 227 1e-60
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 146 2e-36
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 144 1e-35
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 93 2e-20
SPBC215.10 |||haloacid dehalogenase-like hydrolase|Schizosacchar... 29 0.41
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 29 0.72
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 28 0.95
SPBC3B8.09 |||U3 snoRNP-associated protein Utp3 |Schizosaccharom... 27 2.2
SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p... 26 3.8
SPCC320.09 |hem15||ferrochelatase|Schizosaccharomyces pombe|chr ... 26 3.8
SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|c... 25 6.7
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 25 6.7
SPBC25H2.05 |egd2|nac1|nascent polypeptide-associated complex al... 25 6.7
SPAC4G9.04c |||cleavage and polyadenylation specificity factor |... 25 6.7
SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 25 8.8
SPCC74.04 |||amino acid permease, unknown 15|Schizosaccharomyces... 25 8.8
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 349 bits (859), Expect = 1e-97
Identities = 169/199 (84%), Positives = 183/199 (91%)
Frame = +1
Query: 25 KTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLR 204
KTF PEE+SSMVL KM+ETAEAYLG V +AV+TVPAYFNDSQRQATKDAG I+GLNVLR
Sbjct: 110 KTFTPEEISSMVLMKMRETAEAYLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLR 169
Query: 205 IINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGE 384
IINEPTAAAIAYGLD+ GE NVLIFDLGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGE
Sbjct: 170 IINEPTAAAIAYGLDRSNQGESNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGE 229
Query: 385 DFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGI 564
DFD+R+VNHF+QEFKRK KKD+ N RA+RRLRTACERAKRTLSSS QASIEIDSLFEGI
Sbjct: 230 DFDSRLVNHFIQEFKRKNKKDITGNARAVRRLRTACERAKRTLSSSAQASIEIDSLFEGI 289
Query: 565 DFYTSITRARFEELNADLF 621
DFYTSITRARFEEL ADLF
Sbjct: 290 DFYTSITRARFEELCADLF 308
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 341 bits (837), Expect = 7e-95
Identities = 165/199 (82%), Positives = 181/199 (90%)
Frame = +1
Query: 25 KTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLR 204
KTF PEE+SSMVL KM+E+AEA+LG V +AV+TVPAYFNDSQRQATKDAG I+GLNVLR
Sbjct: 110 KTFTPEEISSMVLLKMRESAEAFLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLR 169
Query: 205 IINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGE 384
IINEPTAAAIAYGLD+ E NVLIFDLGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGE
Sbjct: 170 IINEPTAAAIAYGLDRSNQHETNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGE 229
Query: 385 DFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGI 564
DFD+R+VNHF QEFKRK KKD+ N RA+RRLRTACERAKRTLSSS QASIEIDSL+EGI
Sbjct: 230 DFDSRLVNHFAQEFKRKNKKDITGNARAVRRLRTACERAKRTLSSSAQASIEIDSLYEGI 289
Query: 565 DFYTSITRARFEELNADLF 621
DFYTSITRARFEEL ADLF
Sbjct: 290 DFYTSITRARFEELCADLF 308
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 297 bits (728), Expect = 1e-81
Identities = 143/199 (71%), Positives = 167/199 (83%)
Frame = +1
Query: 25 KTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLR 204
K F +E+S+MVLTKMKE +EA L K V+ AVITVPAYF+DSQR ATKDAG I+GLNVLR
Sbjct: 114 KQFTAQEISAMVLTKMKEISEAKLNKRVEKAVITVPAYFSDSQRAATKDAGAIAGLNVLR 173
Query: 205 IINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGE 384
IINEPTAAAIAYGLD K +NVLIFDLGGGTFDVS+L I+ G+FEV +TAGDTHLGGE
Sbjct: 174 IINEPTAAAIAYGLDAKSDKPKNVLIFDLGGGTFDVSLLKIQGGVFEVLATAGDTHLGGE 233
Query: 385 DFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGI 564
DFDN +V HF+QEFKRK K D++ + RALRRLR+ACERAKR LSS TQ ++E+DSL GI
Sbjct: 234 DFDNALVEHFIQEFKRKQKIDISDDPRALRRLRSACERAKRALSSVTQTTVEVDSLSNGI 293
Query: 565 DFYTSITRARFEELNADLF 621
DF +SITRARFE++NA F
Sbjct: 294 DFSSSITRARFEDINATTF 312
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 274 bits (673), Expect = 5e-75
Identities = 125/203 (61%), Positives = 168/203 (82%)
Frame = +1
Query: 13 GTRDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGL 192
G + K F PEE+S+M+L+KMK+TAEAYLGK V +AV+TVPAYFND+QRQATKDAGTI+GL
Sbjct: 139 GGKKKKFTPEEISAMILSKMKQTAEAYLGKPVTHAVVTVPAYFNDAQRQATKDAGTIAGL 198
Query: 193 NVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTH 372
NV+RI+NEPTAAAIAYGLDK T E++++++DLGGGTFDVS+L+I++G+FEV +T+GDTH
Sbjct: 199 NVIRIVNEPTAAAIAYGLDKTDT-EKHIVVYDLGGGTFDVSLLSIDNGVFEVLATSGDTH 257
Query: 373 LGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSL 552
LGGEDFDNR++N+ + + RK D+ + +A+ +L+ E+AKRTLSS IEI+S
Sbjct: 258 LGGEDFDNRVINYLARTYNRKNNVDVTKDLKAMGKLKREVEKAKRTLSSQKSVRIEIESF 317
Query: 553 FEGIDFYTSITRARFEELNADLF 621
F G DF +++RA+FEE+N DLF
Sbjct: 318 FNGQDFSETLSRAKFEEINMDLF 340
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 227 bits (555), Expect = 1e-60
Identities = 111/204 (54%), Positives = 147/204 (72%), Gaps = 4/204 (1%)
Frame = +1
Query: 7 WRGTRDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTIS 186
W R KT+ P ++ +L+KM+ETA YLGK V+NAV+TVPAYFNDSQRQATK AG I+
Sbjct: 150 WLEARGKTYSPSQIGGFILSKMRETASTYLGKDVKNAVVTVPAYFNDSQRQATKAAGAIA 209
Query: 187 GLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGD 366
GLNVLR++NEPTAAA+AYGLDKK + V +FDLGGGTFD+SIL + +G+FEV+ST GD
Sbjct: 210 GLNVLRVVNEPTAAALAYGLDKK--NDAIVAVFDLGGGTFDISILELNNGVFEVRSTNGD 267
Query: 367 THLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEID 546
THLGGEDFD +V H V+ FK+ DL+ ++ A++R+R A E+AK LSS ++ I +
Sbjct: 268 THLGGEDFDVALVRHIVETFKKNEGLDLSKDRLAVQRIREAAEKAKCELSSLSKTDISLP 327
Query: 547 SLFEGI----DFYTSITRARFEEL 606
+ I+RA+FE+L
Sbjct: 328 FITADATGPKHINMEISRAQFEKL 351
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 146 bits (355), Expect = 2e-36
Identities = 77/185 (41%), Positives = 112/185 (60%), Gaps = 4/185 (2%)
Frame = +1
Query: 64 TKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYG 243
TK+K AEA L +V + VI++PA+F D QR+A +A I+GLN LR++N+ AAA+ YG
Sbjct: 127 TKIKAIAEAELIGSVSDVVISIPAWFTDIQRRALLEAANIAGLNPLRLMNDNAAAALTYG 186
Query: 244 LDKKGTGE----RNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH 411
+ K E R V I D G + VSI+ G F +KST D +LG + D ++++
Sbjct: 187 ITKTDLPEPESPRRVAIVDFGHSNYSVSIVEFSRGQFHIKSTVCDRNLGSRNMDKALIDY 246
Query: 412 FVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRA 591
F EFK KYK D+ +N +A RL TA ER K+ LS++ A + ++ + ID + I R+
Sbjct: 247 FAAEFKEKYKIDVLSNPKATFRLATAVERLKKVLSANANAPLNVEMIMNDIDASSFIKRS 306
Query: 592 RFEEL 606
FEEL
Sbjct: 307 DFEEL 311
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 144 bits (348), Expect = 1e-35
Identities = 70/194 (36%), Positives = 119/194 (61%)
Frame = +1
Query: 19 RDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNV 198
++K E S L ++ E+AE +LG V V++VP YF D+QR+A + A +GL V
Sbjct: 134 KEKILTAHEASVRHLRRLTESAEDFLGTKVNGCVMSVPVYFTDAQRKALESAANEAGLPV 193
Query: 199 LRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLG 378
L++I++P A +A ++ ++ V++ + G +VS+++++ G+ + ++ D +LG
Sbjct: 194 LQLIHDPAAVILALMYSEEVLIDKTVVVANFGATRSEVSVVSVKGGLMTILASVHDENLG 253
Query: 379 GEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFE 558
GE + +VN F +EF++K D N R+L +LR CE KR LS+ T AS +DSL +
Sbjct: 254 GEQLTDVLVNFFAKEFEKKNGIDPRKNARSLAKLRAQCEITKRVLSNGTTASAAVDSLAD 313
Query: 559 GIDFYTSITRARFE 600
GIDF++SI R R++
Sbjct: 314 GIDFHSSINRLRYD 327
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 93.5 bits (222), Expect = 2e-20
Identities = 63/212 (29%), Positives = 107/212 (50%), Gaps = 13/212 (6%)
Frame = +1
Query: 22 DKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVL 201
++ + EE+ +M + AE + + + V+TVP +FN+ QR +A I +VL
Sbjct: 132 EENYSLEEIIAMTMEHYISLAEEMAHEKITDLVLTVPPHFNELQRSILLEAARILNKHVL 191
Query: 202 RIINEPTAAAIAYGLDKK-GTGERNVLIFDLGGGTFDVSIL---TIE-------DGIFEV 348
+I++ A AI Y L + T +I+D G G+ +++ T+E I +
Sbjct: 192 ALIDDNVAVAIEYSLSRSFSTDPTYNIIYDSGSGSTSATVISFDTVEGSSLGKKQNITRI 251
Query: 349 KSTA-GDT-HLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSS 522
++ A G T L G + + +++ F +K+ DL+ N RAL RL R K LS++
Sbjct: 252 RALASGFTLKLSGNEINRKLIGFMKNSFYQKHGIDLSHNHRALARLEKEALRVKHILSAN 311
Query: 523 TQASIEIDSLFEGIDFYTSITRARFEELNADL 618
++A I+ L +GIDF ITR+ E L D+
Sbjct: 312 SEAIASIEELADGIDFRLKITRSVLESLCKDM 343
>SPBC215.10 |||haloacid dehalogenase-like
hydrolase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 29.5 bits (63), Expect = 0.41
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +2
Query: 434 NTKRTSLPTRELLGVCVLHVRGQR-GPCHRPHKRALR*ILSLR 559
N K+ LP E + + + V G GP H+PH R LR + LR
Sbjct: 9 NQKKNVLPKPEDIQLIICDVDGTLLGPDHKPHPRNLRALKYLR 51
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 28.7 bits (61), Expect = 0.72
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -2
Query: 392 SKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSK 282
+KSSP K VSP V SK +S V + S +P +K
Sbjct: 203 NKSSPVKHVSPNVKNNSKKTASSVNSNHSSIPSSITK 239
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 28.3 bits (60), Expect = 0.95
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = -2
Query: 392 SKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLS 246
+ S PP P + IP PPPRS ST R P P S
Sbjct: 333 NSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSS 381
>SPBC3B8.09 |||U3 snoRNP-associated protein Utp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 597
Score = 27.1 bits (57), Expect = 2.2
Identities = 33/157 (21%), Positives = 68/157 (43%), Gaps = 3/157 (1%)
Frame = +1
Query: 49 SSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAA 228
SS+ + ++KE + T ++ + ++N +Q + DA + L + +E A
Sbjct: 15 SSLKVPEIKEKEKINAINTYEDVANSEDEFYN-AQDKILFDADNGEQADELELSDEELVA 73
Query: 229 AIAYGLDKKGTGERNVLIFD-LGGGTFDVSILTIEDGIFEVKS--TAGDTHLGGEDFDNR 399
+ ++ G E N+ + L G D E+ +++ K + ++ GG+D+DN
Sbjct: 74 LESSSDEEDGNAEENLSENEELSGKKKDA---VNEEELYDNKGWGRSAKSYYGGDDYDNE 130
Query: 400 MVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRT 510
+ EF + ++ + ALR R E+ T
Sbjct: 131 DYSEEDDEFDARMEE-----QEALRLQRKRLEKVSET 162
>SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2280
Score = 26.2 bits (55), Expect = 3.8
Identities = 19/57 (33%), Positives = 22/57 (38%)
Frame = +1
Query: 244 LDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHF 414
LDK G+ I GG T SIL +GI VK E F+N F
Sbjct: 48 LDKAPAGKVKDYIASHGGHTVITSILIANNGIAAVKEIRSIRKWAYETFNNERAIKF 104
>SPCC320.09 |hem15||ferrochelatase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 384
Score = 26.2 bits (55), Expect = 3.8
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 428 LNSWTKWLTMRLSKSSPPKWVSPAVDF 348
LN K++ SK P W+SPA DF
Sbjct: 256 LNYKNKFVNAWQSKVGPLPWMSPATDF 282
>SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|chr
2|||Manual
Length = 807
Score = 25.4 bits (53), Expect = 6.7
Identities = 18/72 (25%), Positives = 29/72 (40%)
Frame = -2
Query: 380 PPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLSRP*AIAAAVGSLMIR 201
PP S K P V VP P S S R P+L I+ + G+L+++
Sbjct: 416 PPSIASSPESKRRKCPKKFVARPP--VPHPTSLYSQIRIGCPYLKPKLVISKSFGTLIVK 473
Query: 200 RTFKPEMVPASF 165
+ ++ +F
Sbjct: 474 NHNQLSLLKCTF 485
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 25.4 bits (53), Expect = 6.7
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 400 MVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASI 537
+++ F EFK++ K D + L+ L + C R R SS SI
Sbjct: 711 ILSSFSNEFKKRLKSDGTSIAHWLQGLASFCGRVFRRYSSLDCTSI 756
>SPBC25H2.05 |egd2|nac1|nascent polypeptide-associated complex alpha
subunit Egd2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 25.4 bits (53), Expect = 6.7
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +1
Query: 46 VSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATK 168
++ ++ K A LGK + FN+SQ+QAT+
Sbjct: 57 INEPIVYKSSNNAYIVLGKVTVEDMAAQARAFNESQKQATE 97
>SPAC4G9.04c |||cleavage and polyadenylation specificity factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 638
Score = 25.4 bits (53), Expect = 6.7
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +2
Query: 296 AVPSTCPSLPSRMVSSR*NPPPATPTW 376
++PST P++PS +S + PP T ++
Sbjct: 299 SIPSTIPTIPSAYSASVSSQPPLTHSY 325
>SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 676
Score = 25.0 bits (52), Expect = 8.8
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1
Query: 301 TFDVSILTIEDGIFEVKSTAGDTHL 375
TF I DG+FE GD+HL
Sbjct: 48 TFPTEIWETRDGLFEEPVGKGDSHL 72
>SPCC74.04 |||amino acid permease, unknown 15|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 25.0 bits (52), Expect = 8.8
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -3
Query: 544 LSQCSLVWTMTRSSLPSHMQYANA 473
+S C ++WTM+ P HM A
Sbjct: 265 MSFCGVIWTMSGYDAPFHMSEETA 288
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,651,606
Number of Sequences: 5004
Number of extensions: 54882
Number of successful extensions: 212
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 208
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 273658928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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