Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0973
(621 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 364 e-101
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 350 6e-97
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 339 9e-94
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 284 5e-77
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 161 4e-40
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 156 1e-38
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 120 1e-27
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 112 2e-25
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 99 3e-21
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 85 3e-17
SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_29289| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.75
SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5) 31 1.00
SB_41892| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_30668| Best HMM Match : NIF3 (HMM E-Value=5.1) 30 1.7
SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015) 30 1.7
SB_43375| Best HMM Match : Pneumo_att_G (HMM E-Value=3.6) 29 2.3
SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06) 29 2.3
SB_28120| Best HMM Match : ScdA_N (HMM E-Value=6.5) 29 2.3
SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85) 29 2.3
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_50521| Best HMM Match : MFS_1 (HMM E-Value=0.0026) 29 3.0
SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_38784| Best HMM Match : Apo-VLDL-II (HMM E-Value=8.3) 28 5.3
SB_55740| Best HMM Match : C1_1 (HMM E-Value=3.6) 28 5.3
SB_48208| Best HMM Match : rve (HMM E-Value=2e-20) 28 7.0
SB_52092| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_46921| Best HMM Match : Endomucin (HMM E-Value=6.3) 28 7.0
SB_45916| Best HMM Match : Cadherin (HMM E-Value=0) 28 7.0
SB_46131| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
SB_36932| Best HMM Match : HTH_8 (HMM E-Value=1.4) 27 9.3
SB_30476| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
SB_53811| Best HMM Match : Mab-21 (HMM E-Value=0.003) 27 9.3
SB_31943| Best HMM Match : ResIII (HMM E-Value=1.6) 27 9.3
SB_29335| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
SB_14895| Best HMM Match : CcmE (HMM E-Value=5.3) 27 9.3
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 364 bits (896), Expect = e-101
Identities = 175/199 (87%), Positives = 190/199 (95%)
Frame = +1
Query: 25 KTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLR 204
K+FFPEE+SSMVLTKMKETAEAYLG V +AV+TVPAYF+DSQRQATKDAGTI+GLNVLR
Sbjct: 112 KSFFPEEISSMVLTKMKETAEAYLGAKVTDAVVTVPAYFHDSQRQATKDAGTIAGLNVLR 171
Query: 205 IINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGE 384
IINEPTAAAIAYGLDKK ERNVLI+DLGGGTFDVS+LTIEDGIFEVKSTAGDTHLGGE
Sbjct: 172 IINEPTAAAIAYGLDKKVGVERNVLIYDLGGGTFDVSVLTIEDGIFEVKSTAGDTHLGGE 231
Query: 385 DFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGI 564
DFDN+MV+HFV++FK+KYKKD+ NKRA+RRLRTACERAKRTLSSSTQASIEIDSLFEGI
Sbjct: 232 DFDNKMVDHFVKQFKQKYKKDITPNKRAMRRLRTACERAKRTLSSSTQASIEIDSLFEGI 291
Query: 565 DFYTSITRARFEELNADLF 621
DFYTSITRARFEELN DLF
Sbjct: 292 DFYTSITRARFEELNQDLF 310
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 350 bits (860), Expect = 6e-97
Identities = 170/206 (82%), Positives = 191/206 (92%), Gaps = 1/206 (0%)
Frame = +1
Query: 7 WRGTRDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTIS 186
++G R KTF EE+SSMVL KMKETAEAYLG+ V +AVITVPAYFNDSQRQATKDAGTI+
Sbjct: 107 YKGER-KTFAAEEISSMVLGKMKETAEAYLGQKVTSAVITVPAYFNDSQRQATKDAGTIA 165
Query: 187 GLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAG 363
GLNVLR+INEPTAAA+AYGLDK +GE+NVLIFDLGGGTFDVSILTI+DG +FEVKSTAG
Sbjct: 166 GLNVLRVINEPTAAALAYGLDKSLSGEKNVLIFDLGGGTFDVSILTIDDGSLFEVKSTAG 225
Query: 364 DTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEI 543
DTHLGGEDFDNR+VNHFV EFKRKYKKD++ N RA+RRLRTACERAKRTLSSST+ASIE+
Sbjct: 226 DTHLGGEDFDNRLVNHFVAEFKRKYKKDMSKNSRAMRRLRTACERAKRTLSSSTEASIEV 285
Query: 544 DSLFEGIDFYTSITRARFEELNADLF 621
DSLFEGIDFYT I+RARFE+L +DLF
Sbjct: 286 DSLFEGIDFYTKISRARFEDLCSDLF 311
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 339 bits (834), Expect = 9e-94
Identities = 165/193 (85%), Positives = 179/193 (92%)
Frame = +1
Query: 43 EVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPT 222
++SSMVL KMKETAEAYLG V +AV+TVPAYFNDSQRQATKDAG ISGLNVLRIINEPT
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAGVISGLNVLRIINEPT 270
Query: 223 AAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 402
AAAIAYGLDKK ERNVLIFDLGGGTFDVS+L+IEDGIFEVKST GDTHLGGEDFDN M
Sbjct: 271 AAAIAYGLDKKVGQERNVLIFDLGGGTFDVSVLSIEDGIFEVKSTHGDTHLGGEDFDNNM 330
Query: 403 VNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSI 582
V+ FV++FK+KYKKD+ NKRALRRLRTACERAKRTLSSSTQASIEIDSL++GIDFYTSI
Sbjct: 331 VDFFVKQFKQKYKKDITPNKRALRRLRTACERAKRTLSSSTQASIEIDSLYDGIDFYTSI 390
Query: 583 TRARFEELNADLF 621
TRARFEE+NA LF
Sbjct: 391 TRARFEEMNAHLF 403
Score = 90.6 bits (215), Expect = 9e-19
Identities = 43/51 (84%), Positives = 46/51 (90%)
Frame = +1
Query: 25 KTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAG 177
KTFF EE+SSMVL KMKETAEAYLG V +AV+TVPAYFNDSQRQATKDAG
Sbjct: 137 KTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAG 187
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 284 bits (696), Expect = 5e-77
Identities = 134/199 (67%), Positives = 167/199 (83%)
Frame = +1
Query: 25 KTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLR 204
KTF EE+S+MVLTKMKETAEAYLGK V +AV+TVPAYFND+QRQATKDAG I+GL V+R
Sbjct: 810 KTFAAEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGAIAGLTVMR 869
Query: 205 IINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGE 384
IINEPTAAAIAYG+DKK GE+N+L+FDLGGGTFDVS+LTI++G+FEV +T GDTHLGGE
Sbjct: 870 IINEPTAAAIAYGMDKK-EGEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGE 928
Query: 385 DFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGI 564
DFD ++ HF++ +K+K K++ + RA+++LR E+AKR LS+ QA +EI+S FEG
Sbjct: 929 DFDQNVMEHFIKLYKKKKGKNIRKDNRAVQKLRREVEKAKRALSTQHQARVEIESFFEGE 988
Query: 565 DFYTSITRARFEELNADLF 621
DF +TRARFEELNA LF
Sbjct: 989 DFSEMLTRARFEELNAKLF 1007
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 161 bits (391), Expect = 4e-40
Identities = 87/200 (43%), Positives = 128/200 (64%), Gaps = 5/200 (2%)
Frame = +1
Query: 37 PEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINE 216
PEE+ V+ K++ AE L TV AV++VPA F+ QR AT A +++G+ VLR+INE
Sbjct: 146 PEEIGGYVIKKLRTMAERNLTTTVTKAVMSVPAEFDIKQRNATVKAASLAGITVLRVINE 205
Query: 217 PTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDN 396
PTAAA+AYGL KK G NV++ DLGGGT DVS+L I+ G+F + AG+ LGG+DF+
Sbjct: 206 PTAAALAYGLHKK-EGVANVMVVDLGGGTLDVSLLNIQGGMFVTMAMAGNNRLGGQDFNA 264
Query: 397 RMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIE--IDSLFEG--- 561
R + + +Q +++ + L T ++RLR E AK L+ + + +I+ + SL EG
Sbjct: 265 RFMQYLLQLIHKRFNRQL-TCSEDIQRLRQEVEAAKINLTRTNEVTIKLMLPSLSEGKKI 323
Query: 562 IDFYTSITRARFEELNADLF 621
+ F +I+R FE +N DLF
Sbjct: 324 VKFKETISRKMFETINEDLF 343
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 156 bits (379), Expect = 1e-38
Identities = 83/204 (40%), Positives = 125/204 (61%), Gaps = 4/204 (1%)
Frame = +1
Query: 19 RDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNV 198
+ + F PE+V +M+ T++K TAE L V + VI+VP+Y+ D QR+ DA +GLN
Sbjct: 167 KQEVFSPEQVMAMLFTRLKTTAEIALKTKVTDCVISVPSYYTDRQRRCMLDASATAGLNC 226
Query: 199 LRIINEPTAAAIAYGLDKKG---TGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDT 369
LR++N+ TA ++AYG+ K+ RNV+ D+G + V I G +V STA +
Sbjct: 227 LRLMNDTTAVSLAYGIYKQDLPTDKPRNVVFVDIGHSSLQVCITAFLKGQLKVLSTAVEP 286
Query: 370 HLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSST-QASIEID 546
+LGG DFD +V HF QEFK KYK D+ ++ +A +L CE+ K+ +S++T + I I+
Sbjct: 287 NLGGRDFDYVLVEHFAQEFKTKYKIDVHSSIKAKIKLGAECEKLKKLMSANTSEIPINIE 346
Query: 547 SLFEGIDFYTSITRARFEELNADL 618
E D + + RA+FEEL ADL
Sbjct: 347 CFMEDKDVHGRMKRAQFEELAADL 370
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 120 bits (288), Expect = 1e-27
Identities = 72/218 (33%), Positives = 119/218 (54%), Gaps = 18/218 (8%)
Frame = +1
Query: 22 DKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVL 201
D TF PEE+ M+L + E + +++ V+TVP +FN ++R+A A + GLNVL
Sbjct: 77 DVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFFNQAERRALLRAAELVGLNVL 136
Query: 202 RIINEPTAAAIAYGLDKK----GTGERNVLIFDLGGGTFDVSIL------TIEDGIFE-- 345
+I+N TA A+ YGL ++ T E++ + +D+G + +I+ T + GI E
Sbjct: 137 QIMNSNTAVALNYGLFQQKSFNDTLEKHFMFYDMGASSTVATIVGYSMTKTKDRGISETA 196
Query: 346 ----VKSTAGDTHLGGEDFDNRMVNHFVQEFKR--KYKKDLATNKRALRRLRTACERAKR 507
+K D LGG D R+ +H VQ FK+ K+K ++ + RA+ + R K+
Sbjct: 197 PQLVIKGIGFDRTLGGHAIDMRLRDHLVQLFKKNYKFKGEVTQSSRAMAKFYKEALRVKQ 256
Query: 508 TLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLF 621
LS++ + +I+ +F+G DF +TR EE+ DLF
Sbjct: 257 VLSANNEIFAQIEGVFDGKDFRVKVTREELEEMCQDLF 294
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 112 bits (270), Expect = 2e-25
Identities = 56/119 (47%), Positives = 79/119 (66%), Gaps = 4/119 (3%)
Frame = +1
Query: 274 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLA 453
+ ++DLGGGTFD+SIL I+ G+FEVK+T GDT+LGGEDFDN ++ + EFK++ DL+
Sbjct: 2 IAVYDLGGGTFDISILEIQKGVFEVKATNGDTYLGGEDFDNTLLKFLIAEFKKESGVDLS 61
Query: 454 TNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGID----FYTSITRARFEELNADL 618
+ AL+RLR A E+AK LSSS Q I + + ++R++FE L ADL
Sbjct: 62 KDSMALQRLREAAEKAKIELSSSVQTDINLPYITVDASGPKHLNMKLSRSKFESLVADL 120
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 99.1 bits (236), Expect = 3e-21
Identities = 59/109 (54%), Positives = 74/109 (67%), Gaps = 26/109 (23%)
Frame = +1
Query: 25 KTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLN--- 195
++F PE++S++VL ++K AEA+LG+ V+ AVITVPA+FND+QRQATKDAGTI+GL+
Sbjct: 11 RSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFNDAQRQATKDAGTIAGLDVLS 70
Query: 196 ---------------------VLRIINEPTAAAIAYGLDKK--GTGERN 273
VLRIINEPTAAAIAYGLDK G ERN
Sbjct: 71 RTASERPPSRFRRRRPHGRSRVLRIINEPTAAAIAYGLDKARGGKAERN 119
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 85.4 bits (202), Expect = 3e-17
Identities = 43/113 (38%), Positives = 72/113 (63%), Gaps = 5/113 (4%)
Frame = +1
Query: 265 ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKR---- 432
+ VL++ LGG + DV++L++ +G+++V +T D LGG +FD +++ +FKR
Sbjct: 153 DSTVLVYRLGGASHDVTLLSVINGMYKVLATEYDGALGGRNFDEVLLDLLANDFKRQVLL 212
Query: 433 -KYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITR 588
K+K D TNKR+ +L+T+ E+ K LS+ A+ +DSL EGIDF ++R
Sbjct: 213 WKWKIDPLTNKRSKTKLQTSAEQCKNILSTLESANCSVDSLCEGIDFQGQVSR 265
>SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3235
Score = 33.1 bits (72), Expect = 0.19
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +1
Query: 223 AAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 390
A A L +G E + D G GT VS + +E+G +++ D H+ G F
Sbjct: 1505 AGAGGLSLAIEGPSEAKLTCQDNGDGTCSVSYIPVEEGDYDIHIKFADEHIPGSPF 1560
Score = 31.1 bits (67), Expect = 0.75
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 271 NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 390
+ LI D G+F VS E+GI ++ GD H+ G F
Sbjct: 1428 DTLITDNQDGSFGVSYTPFEEGIHDLAVKFGDDHIPGSPF 1467
Score = 28.7 bits (61), Expect = 4.0
Identities = 19/64 (29%), Positives = 27/64 (42%)
Frame = +1
Query: 211 NEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 390
N P A + GT E +I DLG G + + + E G V +TH+ G F
Sbjct: 3007 NAPVGKVSATVIAPSGT-ESKAVISDLGKGNYAIRFVPKEFGDHLVNVKFDETHIPGSPF 3065
Query: 391 DNRM 402
R+
Sbjct: 3066 KIRV 3069
>SB_29289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 956
Score = 31.1 bits (67), Expect = 0.75
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 411 LCPGVQEEIQKGPRYQQESS*AFAYCM*EGK 503
LCP ++ + GP +++E AFA C+ GK
Sbjct: 169 LCPSPEQNGEPGPMFEREGGDAFANCVARGK 199
>SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5)
Length = 634
Score = 30.7 bits (66), Expect = 1.00
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +1
Query: 274 VLIFDLGGGTFDVSILTIEDGIFEVK 351
V I+DLG GT++++IL E G++ ++
Sbjct: 319 VPIYDLGNGTYEMAILFHEPGVYSIR 344
>SB_41892| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 382
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 402 GQPLCPGVQEEIQKGPRYQQESS*AFAYCM 491
G LCP ++ + GP +++E S AFA C+
Sbjct: 218 GYKLCPLPEQNGEPGPMFEREGSDAFANCV 247
>SB_30668| Best HMM Match : NIF3 (HMM E-Value=5.1)
Length = 1318
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = -2
Query: 425 NSWTKWLTMRLSKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLS 246
N+ +L +L P KW P D +S P V + + PP S + PF+S
Sbjct: 346 NALGYYLATKLQTEDPTKW-PPRYDDSSHFPHLWVVLSYDESTPPPRDGSAKPATQPFVS 404
Query: 245 RP 240
+P
Sbjct: 405 QP 406
>SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015)
Length = 600
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +1
Query: 280 IFDLGGGTFDVSILTIEDGIFEV 348
+FDLG G+++V L +E G++ V
Sbjct: 311 VFDLGNGSYEVLFLVMEPGVYRV 333
>SB_43375| Best HMM Match : Pneumo_att_G (HMM E-Value=3.6)
Length = 774
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +2
Query: 284 LTSAAVPSTCPSLPSRMVSSR*NPPPATPTWEVRTL-TIAWSTTLSRSS 427
L S+A +T P+LP +V+ R PPP+T ++ T+ T+ STT + S+
Sbjct: 97 LDSSATTTTTPTLP--IVTLR--PPPSTSVTQIVTMTTVTISTTTAMST 141
>SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06)
Length = 799
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 371 WVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVP 255
+++PA+ S +PS V +D VP P I+ + VP
Sbjct: 267 YLTPAISTQSTLPSGTVTLDQHNVPHPSGTITLDQHNVP 305
>SB_28120| Best HMM Match : ScdA_N (HMM E-Value=6.5)
Length = 452
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 411 LCPGVQEEIQKGPRYQQESS*AFAYCM*EGK 503
LCP ++ GP +++E S AFA C+ GK
Sbjct: 206 LCPLPEQNGGPGPMFEREGSDAFANCVTRGK 236
>SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85)
Length = 647
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 353 PPPATPTWEVRTL-TIAWSTTLSRSSRGNTKRTSLPTREL 469
PPPA T E L T +W+ T S + R KRT LPT L
Sbjct: 436 PPPAFQTDEPERLQTSSWTETASGTGREEFKRT-LPTAAL 474
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 29.1 bits (62), Expect = 3.0
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Frame = -1
Query: 357 GGFHLEDTILDGKDGHVEGTAAEVK--DKYISFSSTLFVKTVSNRSSS--RFIDDSENVQ 190
G F L D+ G++GH EG+ +EV + ++ + F +T S S F ++S ++Q
Sbjct: 285 GVFVLVDSKDSGENGHTEGSNSEVGTIENFVKTQTKQFKQTACKYSESNLEFNENSAHLQ 344
Query: 189 ---ARDGTC 172
AR TC
Sbjct: 345 VYNARISTC 353
Score = 29.1 bits (62), Expect = 3.0
Identities = 22/75 (29%), Positives = 32/75 (42%)
Frame = -2
Query: 416 TKWLTMRLSKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLSRP* 237
+ W+ KS K P +S + SS TSK PP + +ST SP
Sbjct: 1244 SSWMVTNCQKSC--KRCPPEPPTSSIMQSSSNIPTTSKTPPSSTCLSTAVSPAAGADSNN 1301
Query: 236 AIAAAVGSLMIRRTF 192
A+ A+ SL++ F
Sbjct: 1302 AVNVAISSLVLPSLF 1316
>SB_50521| Best HMM Match : MFS_1 (HMM E-Value=0.0026)
Length = 1080
Score = 29.1 bits (62), Expect = 3.0
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Frame = +1
Query: 58 VLTKMKETAEAYLGKT----------VQNAVITVPAYFNDSQRQATKDAGTISGLNVLRI 207
V K T+E Y+G T + NA +T+P YF + +K G G+ +
Sbjct: 994 VTRKDNNTSETYVGLTENSFKTRRNKIYNAPLTLPPYFWCHPSRKSKKDGAKEGMAM--A 1051
Query: 208 INEPTAAAIAYGLDKKGTG 264
+++ I+Y LD+K TG
Sbjct: 1052 MSKERNQEISYKLDRKWTG 1070
>SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 287 TSAAVPSTCPSLPSRMVSSR*NPPPATP 370
T A P P++PSR +R PPP P
Sbjct: 784 TKPATPRVPPNIPSRPPGARPTPPPPPP 811
>SB_38784| Best HMM Match : Apo-VLDL-II (HMM E-Value=8.3)
Length = 439
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 411 LCPGVQEEIQKGPRYQQESS*AFAYCM 491
LCP ++ + GP +++E S AFA C+
Sbjct: 107 LCPLPEQNGEPGPMFEREGSDAFANCV 133
>SB_55740| Best HMM Match : C1_1 (HMM E-Value=3.6)
Length = 533
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 411 LCPGVQEEIQKGPRYQQESS*AFAYCM 491
LCP ++ + GP +++E S AFA C+
Sbjct: 74 LCPLPEQNGEPGPMFEREGSDAFANCV 100
>SB_48208| Best HMM Match : rve (HMM E-Value=2e-20)
Length = 1557
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = -2
Query: 410 WLTMRLSKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLSRP 240
+ +L P KW D T I +V PPPR + + +PF+S+P
Sbjct: 558 YFATKLQTEDPTKWPPSYEDSTHFIHLWVVLSYEESTPPPRDGTAKL-ATLPFVSQP 613
>SB_52092| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 27.9 bits (59), Expect = 7.0
Identities = 17/74 (22%), Positives = 34/74 (45%)
Frame = +1
Query: 397 RMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYT 576
+ +N + +++K A R + +A T+SS + +I L E + YT
Sbjct: 198 QFINSTNSKTLEEHQKTRADLARLWAHSQELWNQANETVSSISTVKEKITQLDEKLSEYT 257
Query: 577 SITRARFEELNADL 618
+ T R +++ AD+
Sbjct: 258 NRTMERIDQIKADM 271
>SB_46921| Best HMM Match : Endomucin (HMM E-Value=6.3)
Length = 312
Score = 27.9 bits (59), Expect = 7.0
Identities = 19/55 (34%), Positives = 24/55 (43%)
Frame = +2
Query: 305 STCPSLPSRMVSSR*NPPPATPTWEVRTLTIAWSTTLSRSSRGNTKRTSLPTREL 469
S CPSLP+ S TP + TI T + SS T TS PT ++
Sbjct: 46 SLCPSLPTSSTHSTSPTVQTTPAFTTSPATILPPTAKTTSS---TSSTSKPTEDV 97
>SB_45916| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 1774
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -1
Query: 282 DKYISFSSTLFVKTVSNRSSSRFIDDSEN 196
+K ISF +LF+ VSN S+ R+I +E+
Sbjct: 752 NKVISFGPSLFMDKVSNASAGRYICIAES 780
>SB_46131| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 899
Score = 27.5 bits (58), Expect = 9.3
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +2
Query: 8 GGARGTKPFSPRKSVP 55
GG+R TK F P+K++P
Sbjct: 724 GGSRSTKTFKPKKNIP 739
>SB_36932| Best HMM Match : HTH_8 (HMM E-Value=1.4)
Length = 721
Score = 27.5 bits (58), Expect = 9.3
Identities = 20/74 (27%), Positives = 32/74 (43%)
Frame = +1
Query: 334 GIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTL 513
G ++ K T GD DF ++ HF + K ++D A +R A R + T+
Sbjct: 479 GQYKSKHTFGDLSCCLSDFGCQIDRHFFETSHAKGEQD-AAGANIKQRATLAVIRGRATI 537
Query: 514 SSSTQASIEIDSLF 555
S+ Q + S F
Sbjct: 538 KSAKQLHDYLSSKF 551
>SB_30476| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 60
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 3/26 (11%)
Frame = +1
Query: 358 AGDTHLGGEDFD---NRMVNHFVQEF 426
AGD +GGEDFD +V+ F++ F
Sbjct: 19 AGDNDIGGEDFDVMSKSVVSRFIRHF 44
>SB_53811| Best HMM Match : Mab-21 (HMM E-Value=0.003)
Length = 700
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 343 EVKSTAGDTHLGGEDFDNRMVNHFVQEFK 429
EVK T+GD + E DN + H ++ FK
Sbjct: 21 EVKITSGDKGMTKEMIDNHIKGHILEYFK 49
>SB_31943| Best HMM Match : ResIII (HMM E-Value=1.6)
Length = 1053
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 411 LCPGVQEEIQKGPRYQQESS*AFAYCM*EGKEDL 512
LCP ++ + GP +++E AFA C+ D+
Sbjct: 202 LCPLPEQNGEHGPMFEREGIYAFANCVARSSSDM 235
>SB_29335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 840
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 411 LCPGVQEEIQKGPRYQQESS*AFAYCM*EGKEDL 512
LCP ++ + GP +++E AFA C+ D+
Sbjct: 140 LCPLPEQNGEHGPMFEREGIYAFANCVARSSSDM 173
>SB_14895| Best HMM Match : CcmE (HMM E-Value=5.3)
Length = 485
Score = 27.5 bits (58), Expect = 9.3
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -2
Query: 359 AVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPF 252
+V S+IP S + VPPPRS ++ +P PF
Sbjct: 43 SVQIDSQIPGSTFQTVLHPVPPPRS-VAMDNAPKPF 77
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,564,192
Number of Sequences: 59808
Number of extensions: 439931
Number of successful extensions: 1724
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1712
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1536271375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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