Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0972
         (539 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   1.7  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           23   2.3  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    22   4.0  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   4.0  
AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochr...    21   6.9  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   9.2  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   9.2  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -1

Query: 269 VFIIWSVLIPE 237
           VFI+W +L+PE
Sbjct: 308 VFILWIILVPE 318


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +3

Query: 375 SGSLTLPVEAVTERLRPLHIADPAP 449
           SGS+T P + V +  RPL    PAP
Sbjct: 33  SGSITQPTKTVIQSKRPL---APAP 54


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 14/65 (21%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
 Frame = -1

Query: 266 FIIWSVLIPESLNAAIKLRFELGVKLLIGRRECAWLQIISKYPISI-EVKSIIPIRYSII 90
           F++  +L+    N   +LRF+L     +G R   ++Q + +    I  +K  + +   I 
Sbjct: 166 FVVVKMLLVRYRNLTKQLRFKLRFFEKLGNRRLGFVQRLDQIQFDICLLKEGVDLVNDIF 225

Query: 89  KWFVV 75
            W ++
Sbjct: 226 GWQIL 230


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 14/65 (21%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
 Frame = -1

Query: 266 FIIWSVLIPESLNAAIKLRFELGVKLLIGRRECAWLQIISKYPISI-EVKSIIPIRYSII 90
           F++  +L+    N   +LRF+L     +G R   ++Q + +    I  +K  + +   I 
Sbjct: 166 FVVVKMLLVRYRNLTKQLRFKLRFFEKLGNRRLGFVQRLDQIQFDICLLKEGVDLVNDIF 225

Query: 89  KWFVV 75
            W ++
Sbjct: 226 GWQIL 230


>AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 124

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 483 EDIYEALAAVADTMRSFT 536
           E +YE +AAV D + + T
Sbjct: 20  EKLYEEVAAVIDNIENIT 37


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 13/43 (30%), Positives = 15/43 (34%)
 Frame = +3

Query: 147 ADDLEPRTLSPADEELYAKFEAKFDRSIEALWDQNTPDDEYQD 275
           A DL PR  SP D             S  +L D +   D   D
Sbjct: 197 ARDLSPRNGSPTDHSPVLNLSKSGGGSAGSLEDDDNISDPEDD 239


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 15/58 (25%), Positives = 23/58 (39%)
 Frame = +3

Query: 363 LTFGSGSLTLPVEAVTERLRPLHIADPAPAELDSFALYEGEDIYEALAAVADTMRSFT 536
           L   +GS + P  A        + +  +PA +DSF L +      +   V  T  S T
Sbjct: 193 LHVSTGSTSSPTIASATYTNSANSSIWSPASIDSFTLEQHRSWCSSSQPVLSTTNSTT 250


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,617
Number of Sequences: 336
Number of extensions: 2293
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13201902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)