Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0971
(646 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g26390.1 68415.m03167 serpin, putative / serine protease inhi... 81 6e-16
At3g45220.1 68416.m04880 serpin, putative / serine protease inhi... 79 2e-15
At1g47710.1 68414.m05302 serpin, putative / serine protease inhi... 78 6e-15
At2g25240.1 68415.m03020 serpin, putative / serine protease inhi... 71 7e-13
At1g64030.1 68414.m07252 serpin family protein / serine protease... 70 1e-12
At1g62170.1 68414.m07013 serpin family protein / serine protease... 68 6e-12
At2g14540.1 68415.m01628 serpin family protein / serine protease... 65 3e-11
At2g35580.1 68415.m04357 serpin family protein / serine protease... 59 3e-09
At1g63280.1 68414.m07154 serpin-related / serine protease inhibi... 56 2e-08
At1g51330.1 68414.m05772 serpin-related / serine protease inhibi... 54 1e-07
At1g72410.1 68414.m08374 COP1-interacting protein-related simila... 30 1.1
At2g36710.1 68415.m04504 pectinesterase family protein contains ... 30 1.5
At5g37490.1 68418.m04515 U-box domain-containing protein similar... 29 2.0
At1g33390.1 68414.m04133 helicase domain-containing protein simi... 29 2.0
At1g80480.1 68414.m09427 PRLI-interacting factor L, putative sim... 29 2.6
At5g08510.1 68418.m01009 pentatricopeptide (PPR) repeat-containi... 29 3.5
At2g02750.1 68415.m00218 pentatricopeptide (PPR) repeat-containi... 29 3.5
At5g01060.1 68418.m00009 protein kinase family protein contains ... 28 4.6
At2g43210.2 68415.m05371 UBX domain-containing protein contains ... 28 4.6
At2g43210.1 68415.m05370 UBX domain-containing protein contains ... 28 4.6
At2g34610.1 68415.m04252 expressed protein 28 6.1
At2g32620.1 68415.m03982 cellulose synthase family protein simil... 28 6.1
At2g20210.1 68415.m02363 leucine-rich repeat family protein cont... 27 8.1
>At2g26390.1 68415.m03167 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 389
Score = 81.0 bits (191), Expect = 6e-16
Identities = 53/191 (27%), Positives = 91/191 (47%), Gaps = 8/191 (4%)
Frame = +2
Query: 98 LSNVLKNGNDNFTARMFTEVVKNNP--GKSVVLSAFSVLPPLAQLALASDGETHEELLKA 271
L ++N N N AR+ +V++ + G +VV S S+ L+ +A S+ T EE+L
Sbjct: 3 LGKSIENQN-NVVARLAKKVIETDVANGSNVVFSPMSINVLLSLIAAGSNPVTKEEILSF 61
Query: 272 IGFPDDDAIRTEFASKSRDLRSIKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQN 451
+ P D + A + + L A+ V++ L +F + + + +
Sbjct: 62 LMSPSTDHLNAVLAKIADGGTERSDLCLSTAHGVWIDKSSYLKPSFKELLENSYKASCSQ 121
Query: 452 IDFSKNTVAA-KSINDWVEENTNNRIKDLVNPDSLSSA-----TAAVLVNAIYFKGAWSS 613
+DF+ V +N W + +TN IK +++ D + + +L NA+YFK AWS
Sbjct: 122 VDFATKPVEVIDEVNIWADVHTNGLIKQILSRDCTDTIKEIRNSTLILANAVYFKAAWSR 181
Query: 614 KFDERLTSDRD 646
KFD +LT D D
Sbjct: 182 KFDAKLTKDND 192
>At3g45220.1 68416.m04880 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 393
Score = 79.4 bits (187), Expect = 2e-15
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 8/166 (4%)
Frame = +2
Query: 173 GKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRDLRSIKGVE 352
G ++V S S+ L +A S+ T E++L I P D + A K+ + G+E
Sbjct: 28 GSNLVFSPMSINVLLCLIAAGSNCVTKEQILSFIMLPSSDYLNAVLA-KTVSVALNDGME 86
Query: 353 -----LKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFS-KNTVAAKSINDWVEENT 514
L A V++ +F + + +N+ +DF+ K +N W E +T
Sbjct: 87 RSDLHLSTAYGVWIDKSLSFKPSFKDLLENSYNATCNQVDFATKPAEVINEVNAWAEVHT 146
Query: 515 NNRIKDLVNPDSLSSATAAVLV--NAIYFKGAWSSKFDERLTSDRD 646
N IK++++ DS+ + ++L+ NA+YFKGAWS KFD +LT D
Sbjct: 147 NGLIKEILSDDSIKTIRESMLILANAVYFKGAWSKKFDAKLTKSYD 192
>At1g47710.1 68414.m05302 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 391
Score = 77.8 bits (183), Expect = 6e-15
Identities = 50/177 (28%), Positives = 84/177 (47%), Gaps = 6/177 (3%)
Frame = +2
Query: 128 NFTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTE 307
N + T V +N+ +V+ S S+ L+ +A S G T +++L + F D + +
Sbjct: 16 NLAKHVITTVSQNS---NVIFSPASINVVLSIIAAGSAGATKDQILSFLKFSSTDQLNS- 71
Query: 308 FASKS-----RDLRSIKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDF-SKN 469
F+S+ D + G +L +AN ++ +F + D + + DF SK
Sbjct: 72 FSSEIVSAVLADGSANGGPKLSVANGAWIDKSLSFKPSFKQLLEDSYKAASNQADFQSKA 131
Query: 470 TVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSD 640
+N W E+ TN I +++ S S T + NA+YFKG W+ KFDE LT +
Sbjct: 132 VEVIAEVNSWAEKETNGLITEVLPEGSADSMTKLIFANALYFKGTWNEKFDESLTQE 188
>At2g25240.1 68415.m03020 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 324
Score = 70.9 bits (166), Expect = 7e-13
Identities = 36/103 (34%), Positives = 58/103 (56%), Gaps = 3/103 (2%)
Frame = +2
Query: 347 VELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDF-SKNTVAAKSINDWVEENTNNR 523
+ L +AN V++ L +F + + + + +DF SK + +N W E +TN
Sbjct: 25 LRLSIANGVWIDKFFSLKLSFKDLLENSYKATCSQVDFASKPSEVIDEVNTWAEVHTNGL 84
Query: 524 IKDLVNPDSLSS--ATAAVLVNAIYFKGAWSSKFDERLTSDRD 646
IK +++ DS+ + ++ VL NA+YFKGAWSSKFD +T D
Sbjct: 85 IKQILSRDSIDTIRSSTLVLANAVYFKGAWSSKFDANMTKKND 127
>At1g64030.1 68414.m07252 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
[Cucurbita maxima] GI:9937311, serpin [Triticum
aestivum] GI:871551; contains Pfam profile PF00079:
Serpin (serine protease inhibitor)
Length = 385
Score = 70.1 bits (164), Expect = 1e-12
Identities = 45/162 (27%), Positives = 76/162 (46%), Gaps = 6/162 (3%)
Frame = +2
Query: 179 SVVLSAFSVLPPLAQLALASDGE-THEELLKAIGFPDDDAIRTEFASKSR----DLRSIK 343
+V+ S S+ + A G+ ++L + D ++T F + D +
Sbjct: 30 NVIFSPASINSAITMHAAGPGGDLVSGQILSFLRSSSIDELKTVFRELASVVYADRSATG 89
Query: 344 GVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDF-SKNTVAAKSINDWVEENTNN 520
G ++ AN +++ D F + + F + +DF S+ K +N WVE +TNN
Sbjct: 90 GPKITAANGLWIDKSLPTDPKFKDLFENFFKAVYVPVDFRSEAEEVRKEVNSWVEHHTNN 149
Query: 521 RIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRD 646
IKDL+ S++S T + NA+ FKGAW F++ T D D
Sbjct: 150 LIKDLLPDGSVTSLTNKIYANALSFKGAWKRPFEKYYTRDND 191
>At1g62170.1 68414.m07013 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
GI:9937311 from [Cucurbita maxima]; contains Pfam
profile PF00079: Serpin (serine protease inhibitor)
Length = 433
Score = 67.7 bits (158), Expect = 6e-12
Identities = 59/205 (28%), Positives = 100/205 (48%), Gaps = 14/205 (6%)
Frame = +2
Query: 62 TIAIAAMAAVTNLS--NVLKNGNDN---FTARMFTEVVKNNPGKSVVLSAFSVLPPLAQL 226
T + A +++N+ +K ND T + + V KN+ + V S S+ L +
Sbjct: 50 TDLVIASPSLSNIDVGEAMKKQNDVAIFLTGIVISSVAKNS---NFVFSPASINAALTMV 106
Query: 227 ALASDGETHEELLKAIGFPDDDAIRTEFASKSRDLRSIKGVE--LKMANKVYVHDGGKLD 400
A +S GE EEL I + E + R++ S+ V+ K K+ V +G +D
Sbjct: 107 AASSGGEQGEELRSFILSFLKSSSTDELNAIFREIASVVLVDGSKKGGPKIAVVNGMWMD 166
Query: 401 ENFAV--VSRDVF----NSDVQNIDF-SKNTVAAKSINDWVEENTNNRIKDLVNPDSLSS 559
++ +V +S+D+F ++ +DF SK +N W +TN IKDL+ S++S
Sbjct: 167 QSLSVNPLSKDLFKNFFSAAFAQVDFRSKAEEVRTEVNAWASSHTNGLIKDLLPRGSVTS 226
Query: 560 ATAAVLVNAIYFKGAWSSKFDERLT 634
T V +A+YFKG W K+ + +T
Sbjct: 227 LTDRVYGSALYFKGTWEEKYSKSMT 251
>At2g14540.1 68415.m01628 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 407
Score = 65.3 bits (152), Expect = 3e-11
Identities = 48/192 (25%), Positives = 89/192 (46%), Gaps = 9/192 (4%)
Frame = +2
Query: 95 NLSNVLKNGNDN---FTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETHEEL- 262
++ +KN N+ ++ + V KN+ + V S S+ L A +D +T
Sbjct: 30 DMQEAMKNQNEVSLLLVGKVISAVAKNS---NCVFSPASINAVLTVTAANTDNKTLRSFI 86
Query: 263 ---LKAIGFPDDDAIRTEFASKS-RDLRSIKGVELKMANKVYVHDGGKLDENFAVVSRDV 430
LK+ + +AI E AS +D G ++ N V++ + ++ + +
Sbjct: 87 LSFLKSSSTEETNAIFHELASVVFKDGSETGGPKIAAVNGVWMEQSLSCNPDWEDLFLNF 146
Query: 431 FNSDVQNIDFSKNTVAAK-SINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAW 607
F + +DF + +N W +TN+ IK+++ S++S T + NA+YFKGAW
Sbjct: 147 FKASFAKVDFRHKAEEVRLDVNTWASRHTNDLIKEILPRGSVTSLTNWIYGNALYFKGAW 206
Query: 608 SSKFDERLTSDR 643
FD+ +T D+
Sbjct: 207 EKAFDKSMTRDK 218
>At2g35580.1 68415.m04357 serpin family protein / serine protease
inhibitor family protein similar to protein zx [Hordeum
vulgare subsp. vulgare] GI:19071, serpin [Triticum
aestivum] GI:1885350; contains Pfam profile PF00079:
Serpin (serine protease inhibitor)
Length = 374
Score = 58.8 bits (136), Expect = 3e-09
Identities = 42/153 (27%), Positives = 74/153 (48%), Gaps = 9/153 (5%)
Frame = +2
Query: 215 LAQLALASDGETHE-----ELLKAIGFPDDDAIRTEFASKS-RDLRSIKGVELKMANKVY 376
L+ +A +S G+T LL+A A+ +E + D + G + AN ++
Sbjct: 40 LSIIAASSPGDTDTADKIVSLLQASSTDKLHAVSSEIVTTVLADSTASGGPTISAANGLW 99
Query: 377 VHDGGKLDENFAVVSRDVFNSDVQNIDF-SKNTVAAKSINDWVEENTNNRIKDLV--NPD 547
+ ++ +F + + + + +DF +K + +N WVE+ TN I +L+ NP
Sbjct: 100 IEKTLNVEPSFKDLLLNSYKAAFNRVDFRTKADEVNREVNSWVEKQTNGLITNLLPSNPK 159
Query: 548 SLSSATAAVLVNAIYFKGAWSSKFDERLTSDRD 646
S + T + NA++F G W S+FD LT D D
Sbjct: 160 S-APLTDHIFANALFFNGRWDSQFDPSLTKDSD 191
>At1g63280.1 68414.m07154 serpin-related / serine protease
inhibitor-related similar to protein zx [Hordeum vulgare
subsp. vulgare] GI:19071, serpin [Triticum aestivum]
GI:1885346
Length = 120
Score = 56.4 bits (130), Expect = 2e-08
Identities = 24/55 (43%), Positives = 34/55 (61%)
Frame = +2
Query: 482 KSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRD 646
+ +N W ++TN I DL+ S+ S T V NA+YFKGAW +KFD+ T D +
Sbjct: 14 QELNKWASDHTNGLIIDLLPRGSVKSETVQVYGNALYFKGAWENKFDKSSTKDNE 68
>At1g51330.1 68414.m05772 serpin-related / serine protease
inhibitor-related similar to serpin [Hordeum vulgare
subsp. vulgare] CAA64599.1 GI:1197577
Length = 193
Score = 53.6 bits (123), Expect = 1e-07
Identities = 21/49 (42%), Positives = 33/49 (67%)
Frame = +2
Query: 488 INDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLT 634
+N W +TN IK+L+ P S+++ T + NA+YFKGAW +KF + +T
Sbjct: 39 VNSWALRHTNGLIKNLLPPGSVTNQTIKIYGNALYFKGAWENKFGKSMT 87
>At1g72410.1 68414.m08374 COP1-interacting protein-related similar
to COP1-Interacting ProteinI 7 (CIP7) [Arabidopsis
thaliana] GI:3327870
Length = 1163
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 193 REDNAFPWIIFHYFGKHSGCEVIVSIFEHIREICDG 86
R D +++F KHS CE+ VS E ++ G
Sbjct: 2 RSDTVLDYVVFELSPKHSKCELFVSSNEQTEKLASG 37
>At2g36710.1 68415.m04504 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 407
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +1
Query: 10 RHSRDAGHKHEDNHLFVYYRHRGNGSRHKSL*CAQKWKR*LHSQNVYRSS 159
++S GHKH +H ++ H + H+ + C +KW L Q Y++S
Sbjct: 43 KYSTFFGHKHHHHH--HHHHHHHHYHHHEPIKCCEKWTSRLRHQ--YKTS 88
>At5g37490.1 68418.m04515 U-box domain-containing protein similar to
immediate-early fungal elicitor protein CMPG1
[Petroselinum crispum] GI:14582200; contains Pfam
profile PF04564: U-box domain
Length = 435
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -1
Query: 217 ERRQHRKCREDNAFPWIIFHYFGKHSGCEVIVSIFEHI 104
E ++RKC +N+ W++ F K SG E + + I
Sbjct: 153 ESEKNRKCVNENSVGWVLCDCFDKFSGDEKLTFMLNEI 190
>At1g33390.1 68414.m04133 helicase domain-containing protein similar
to kurz protein [Drosophila melanogaster] GI:5869803;
contains Pfam profiles PF04408: Helicase associated
domain (HA2), PF00271: Helicase conserved C-terminal
domain
Length = 1237
Score = 29.5 bits (63), Expect = 2.0
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +2
Query: 152 EVVKN--NPGKSVVLSAFSVLPPLAQLALASDGETHEELL 265
E VKN +PGK VL +++L P AQL + + E E L+
Sbjct: 636 EQVKNKFSPGKLRVLPLYAMLSPAAQLRVFEEVEKEERLV 675
>At1g80480.1 68414.m09427 PRLI-interacting factor L, putative
similar to PRLI-interacting factor L [Arabidopsis
thaliana] GI:11139268; contains Pfam profile PF02492:
Cobalamin synthesis protein/P47K
Length = 444
Score = 29.1 bits (62), Expect = 2.6
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +1
Query: 4 GCRHSRDAGHKHEDNHLFVYYRHRGNGSRHKS 99
G H D H H+ NH ++ H G+ H S
Sbjct: 309 GDHHDHDHDHHHDHNHDHDHHHHDGHDHHHHS 340
>At5g08510.1 68418.m01009 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 511
Score = 28.7 bits (61), Expect = 3.5
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +2
Query: 92 TNLSNVLKNGNDNFTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKA 271
T +S +NGN + +MF + K+ K ++ SVLP A L G E +
Sbjct: 184 TVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARE 243
Query: 272 IGFPDD 289
GF D+
Sbjct: 244 NGFFDN 249
>At2g02750.1 68415.m00218 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 613
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1
Query: 190 EDNAFPWIIFHYFGKHSGCEVIVSIFEHIRE 98
+D F ++ +GKH CE + IFE +RE
Sbjct: 434 KDPVFWNVMISGYGKHGECESAIEIFELLRE 464
>At5g01060.1 68418.m00009 protein kinase family protein contains
eukaryotic protein kinase domain, INTERPRO:IPR000719
Length = 499
Score = 28.3 bits (60), Expect = 4.6
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +2
Query: 161 KNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFA 313
KN P K+ + L P +D + ELL+ +G+ +D+ + EF+
Sbjct: 337 KNLPEKTKPATESLKLTPFGDACSRADLSSIHELLEKLGYEEDNGVGNEFS 387
>At2g43210.2 68415.m05371 UBX domain-containing protein contains
Pfam profile PF00789: UBX domain
Length = 531
Score = 28.3 bits (60), Expect = 4.6
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = -2
Query: 354 SSTPLIDRRSRLLLANSVRIASSSGKPIAFKSSSWVSPSEAKAN*ARGGSTENAERTTLF 175
S TP+ S +L SV + ++ P ++S V PSE K+ +TEN + T
Sbjct: 138 SETPVSSASSVVLPPGSVPLDAAVASP---STASSVQPSETKSTVTSASTTENNDGTVAV 194
Query: 174 PG 169
G
Sbjct: 195 KG 196
>At2g43210.1 68415.m05370 UBX domain-containing protein contains
Pfam profile PF00789: UBX domain
Length = 531
Score = 28.3 bits (60), Expect = 4.6
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = -2
Query: 354 SSTPLIDRRSRLLLANSVRIASSSGKPIAFKSSSWVSPSEAKAN*ARGGSTENAERTTLF 175
S TP+ S +L SV + ++ P ++S V PSE K+ +TEN + T
Sbjct: 138 SETPVSSASSVVLPPGSVPLDAAVASP---STASSVQPSETKSTVTSASTTENNDGTVAV 194
Query: 174 PG 169
G
Sbjct: 195 KG 196
>At2g34610.1 68415.m04252 expressed protein
Length = 290
Score = 27.9 bits (59), Expect = 6.1
Identities = 33/144 (22%), Positives = 52/144 (36%), Gaps = 12/144 (8%)
Frame = +2
Query: 110 LKNGNDNFTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETHEELL---KAIGF 280
L N T R+ V KN P + V + A + + L KA G
Sbjct: 137 LPNKKAKVTERIIQAVSKNQPRNKAIEKCEPVTEQNVHIIAAKEETCNASNLMNSKAYGR 196
Query: 281 PDDDAIRTEFASKSRDLRSIKG-------VELKMANKVYVHDGGKLDENFAVVSRDVFNS 439
D R SK R + IK + + + VH G K DE ++ N
Sbjct: 197 SKSDKARGSVISKERRRQEIKHRHKSYDRSQSDSSKWMVVHKGKKADEEMEEATKKWENV 256
Query: 440 DVQNIDFSK--NTVAAKSINDWVE 505
++ +FSK N + + D+++
Sbjct: 257 KEESEEFSKMSNEELNRRVEDFIQ 280
>At2g32620.1 68415.m03982 cellulose synthase family protein similar
to Zea mays cellulose synthase-5 [gi:9622882], -4
[gi:9622880], -9 [gi:9622890]
Length = 757
Score = 27.9 bits (59), Expect = 6.1
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = -2
Query: 315 LANSVRIASSSGKPIAFKSSSWVSPSEAKAN*ARGGSTENAERTTLFPGLFFTTSVNILA 136
L+ +V + S P+ S S + PS+ + + G TE PG F VN+ A
Sbjct: 627 LSKNVFLVSKKTMPVETMSGSGIGPSQREDDGPNSGKTEFDGSLYFLPGTFIVL-VNLAA 685
Query: 135 V 133
+
Sbjct: 686 L 686
>At2g20210.1 68415.m02363 leucine-rich repeat family protein
contains leucine rich repeat (LRR) domains, Pfam:PF00560
Length = 604
Score = 27.5 bits (58), Expect = 8.1
Identities = 17/68 (25%), Positives = 32/68 (47%)
Frame = +2
Query: 104 NVLKNGNDNFTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFP 283
N+ KN TAR ++++ P + ++++++PP A L L T + LK +
Sbjct: 503 NISKNRGGLETARFLSKLIPLAPKLISIDASYNLMPPEALLMLCDSLRTAKGDLKRLDMT 562
Query: 284 DDDAIRTE 307
+ I E
Sbjct: 563 GNSCISHE 570
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,310,236
Number of Sequences: 28952
Number of extensions: 267156
Number of successful extensions: 948
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 944
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1334473344
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -