Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0970
         (502 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119001-1|AAM50861.1|  503|Drosophila melanogaster LP02983p pro...    29   4.7  
AE014134-3196|AAF53870.1|  651|Drosophila melanogaster CG10730-P...    29   4.7  

>AY119001-1|AAM50861.1|  503|Drosophila melanogaster LP02983p
           protein.
          Length = 503

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
 Frame = +2

Query: 146 KYFKFINVT---CKQCSRILTVNTLSPRYIQS*TEYLIRSI 259
           K FK  N T    + CS I T N L P +++  T+Y +R +
Sbjct: 127 KRFKKANYTTAFAEDCSSISTFNYLKPGFVKQPTDYYLRPL 167


>AE014134-3196|AAF53870.1|  651|Drosophila melanogaster CG10730-PA
           protein.
          Length = 651

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
 Frame = +2

Query: 146 KYFKFINVT---CKQCSRILTVNTLSPRYIQS*TEYLIRSI 259
           K FK  N T    + CS I T N L P +++  T+Y +R +
Sbjct: 275 KRFKKANYTTAFAEDCSSISTFNYLKPGFVKQPTDYYLRPL 315


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,941,312
Number of Sequences: 53049
Number of extensions: 306213
Number of successful extensions: 531
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 531
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1784022528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)