Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0969
         (649 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    25   1.6  
AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    23   8.3  
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    23   8.3  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    23   8.3  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -2

Query: 582  FDVDGNSKFSQHFLVKFKSHRLNN 511
            F +D   K +QH LV +KSH++ N
Sbjct: 2065 FGID-EKKHAQHVLVDYKSHQILN 2087


>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +2

Query: 59  IAFGTFRCLWYI 94
           IAF TFR  WYI
Sbjct: 81  IAFPTFRSSWYI 92


>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine
           dehydrogenase protein.
          Length = 1325

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 198 TLSLWFKVYF*IAKDVRKNGL 260
           TLSL+FK Y  IA+ + K  +
Sbjct: 500 TLSLFFKAYLAIAQSLDKQSI 520


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 497 ISKYILFKRCDLNLTRKCC 553
           ++K I  K+CD+  T +CC
Sbjct: 34  LAKGISIKKCDIFQTCECC 52


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 623,383
Number of Sequences: 2352
Number of extensions: 12262
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)