Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0968
         (468 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   4.3  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    21   4.3  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   7.5  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   7.5  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   7.5  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
          protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +1

Query: 1  QEFGTRTIPSYLR 39
          Q   TRTIPS+LR
Sbjct: 19 QRVVTRTIPSFLR 31


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 395 THERQSFRGLPDGRSLLIV 451
           TH   +F GL D  SLLI+
Sbjct: 51  THVNYAFLGLNDDGSLLIL 69


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 356 SSSILMNYVCTYFLILC 306
           SSS+  NY+ T  ++ C
Sbjct: 59  SSSVFPNYIRTTSMVFC 75


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 356 SSSILMNYVCTYFLILC 306
           SSS+  NY+ T  ++ C
Sbjct: 59  SSSVFPNYIRTTSMVFC 75


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -3

Query: 115 LSIFILSSLKYRC*NRCKKIKAQIF 41
           L IF L  L +RC   CK+     F
Sbjct: 145 LFIFDLIFLSFRCTKLCKEANKTAF 169


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,726
Number of Sequences: 336
Number of extensions: 1820
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10826639
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)