Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0968
         (468 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069293-1|AAL39438.1|  178|Drosophila melanogaster GM14577p pro...    29   2.4  
AE013599-1835|AAF58285.1|  178|Drosophila melanogaster CG8331-PA...    29   2.4  
AY075300-1|AAL68167.2|  145|Drosophila melanogaster AT31258p pro...    27   9.6  
AE014297-3850|AAF56507.1|  174|Drosophila melanogaster CG4960-PA...    27   9.6  

>AY069293-1|AAL39438.1|  178|Drosophila melanogaster GM14577p
           protein.
          Length = 178

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -2

Query: 392 WPSFDIFHTVAVSSSILMNYVCTYFLILCKFFI 294
           W +F IF  +   SS+L + +  Y+L+ C F I
Sbjct: 98  WVTFGIFTVIEFFSSLLTSVIPFYWLLKCAFLI 130


>AE013599-1835|AAF58285.1|  178|Drosophila melanogaster CG8331-PA
           protein.
          Length = 178

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -2

Query: 392 WPSFDIFHTVAVSSSILMNYVCTYFLILCKFFI 294
           W +F IF  +   SS+L + +  Y+L+ C F I
Sbjct: 98  WVTFGIFTVIEFFSSLLTSVIPFYWLLKCAFLI 130


>AY075300-1|AAL68167.2|  145|Drosophila melanogaster AT31258p
           protein.
          Length = 145

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -2

Query: 392 WPSFDIFHTVAVSSSILMNYVCTYFLILCKFFI 294
           W +F IF  +    S+L + +  Y+L+ C F I
Sbjct: 72  WVTFGIFTVIEFYPSLLTSMIPFYWLLKCTFLI 104


>AE014297-3850|AAF56507.1|  174|Drosophila melanogaster CG4960-PA
           protein.
          Length = 174

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -2

Query: 392 WPSFDIFHTVAVSSSILMNYVCTYFLILCKFFI 294
           W +F IF  +    S+L + +  Y+L+ C F I
Sbjct: 101 WVTFGIFTVIEFYPSLLTSMIPFYWLLKCTFLI 133


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,883,384
Number of Sequences: 53049
Number of extensions: 289460
Number of successful extensions: 405
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 405
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1580609772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)