Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0963
(549 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0456 + 29521282-29522064 32 0.35
06_03_0854 + 25400855-25403741,25406174-25407708 29 2.4
03_05_1067 - 30105850-30106034,30106036-30106192,30106301-30106399 29 2.4
06_03_1448 + 30235336-30236763 29 3.2
06_03_1443 + 30182018-30183445 29 3.2
06_03_1440 + 30166515-30167942 29 3.2
06_03_1437 + 30151030-30152457 29 3.2
06_03_1429 + 30100834-30102261 29 3.2
06_03_1425 + 30084383-30085810 29 3.2
06_03_1420 - 30053713-30055140 29 3.2
06_01_0328 + 2379610-2380359,2380479-2381108,2381222-2381764 29 3.2
02_02_0350 + 9239138-9240218,9240755-9240906,9241392-9241457,924... 29 3.2
01_06_1406 - 37073548-37073822,37073892-37074111,37074200-370742... 29 3.2
06_01_0149 + 1124427-1126805 28 4.3
03_02_0740 - 10836752-10837052,10837756-10837814,10837901-108384... 28 4.3
12_02_0077 - 13288916-13289659,13289689-13289691 28 5.6
11_01_0498 - 3828516-3829058 28 5.6
08_02_1371 + 26493981-26494471,26497374-26497504,26497947-26498692 28 5.6
06_01_0437 + 3101449-3101521,3101872-3102232,3103766-3103958,310... 28 5.6
04_01_0416 - 5504415-5504590,5509032-5509116,5509190-5509322,550... 28 5.6
06_03_0507 + 21603472-21603750,21604371-21604463,21605046-216053... 27 7.5
04_03_0473 - 16332870-16332947,16333013-16333474,16333615-163337... 27 7.5
02_04_0220 - 21014225-21014386,21014492-21014572,21014739-210149... 27 7.5
01_06_1759 + 39689410-39689573,39689728-39689923,39690014-396901... 27 7.5
10_08_0531 + 18576913-18578058,18578724-18578843,18578924-185789... 27 9.9
02_05_0726 - 31252210-31253166,31253667-31253840,31254320-312543... 27 9.9
01_01_1195 - 9567023-9567789,9567871-9568120 27 9.9
>01_06_0456 + 29521282-29522064
Length = 260
Score = 31.9 bits (69), Expect = 0.35
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Frame = -2
Query: 392 AWQC--PRTGSRGSFKRRRAFPPRHHSARLER----NTVRPPILSTA 270
AW+C P +G+RG +RRR P S R R +T+RP + S A
Sbjct: 12 AWRCYSPASGARGGSRRRRRRPAGTTSRRCSRADRLDTLRPYVTSAA 58
>06_03_0854 + 25400855-25403741,25406174-25407708
Length = 1473
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -2
Query: 203 AKRSPTYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVS 78
AKR+PT T P AR +++ +F +P P P +V+S
Sbjct: 475 AKRAPTAVTVGAPPPQARTPAAAPAKAF-VSAPAPAPSSVIS 515
>03_05_1067 - 30105850-30106034,30106036-30106192,30106301-30106399
Length = 146
Score = 29.1 bits (62), Expect = 2.4
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = +1
Query: 292 RTVFRSKRAEW*RGGNARRRLKLPRDPVRGHCQAGSLTGAVHLSKNNAGVLRPAQRGQKP 471
R + +R E G +RR L D +RG+ + A H AG + RG KP
Sbjct: 59 RCIAEGRREEEEEVGRSRRGKDLDLDDMRGYGET-----ATHHGLRLAGREEVSPRGGKP 113
Query: 472 RVEQKGK 492
RV+ G+
Sbjct: 114 RVDNGGR 120
>06_03_1448 + 30235336-30236763
Length = 475
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -3
Query: 397 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTAS 260
+PP L +L+ GD+R+ V LH W+E R YR +S
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSS 171
>06_03_1443 + 30182018-30183445
Length = 475
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -3
Query: 397 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTAS 260
+PP L +L+ GD+R+ V LH W+E R YR +S
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSS 171
>06_03_1440 + 30166515-30167942
Length = 475
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -3
Query: 397 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTAS 260
+PP L +L+ GD+R+ V LH W+E R YR +S
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSS 171
>06_03_1437 + 30151030-30152457
Length = 475
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -3
Query: 397 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTAS 260
+PP L +L+ GD+R+ V LH W+E R YR +S
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSS 171
>06_03_1429 + 30100834-30102261
Length = 475
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -3
Query: 397 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTAS 260
+PP L +L+ GD+R+ V LH W+E R YR +S
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSS 171
>06_03_1425 + 30084383-30085810
Length = 475
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -3
Query: 397 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTAS 260
+PP L +L+ GD+R+ V LH W+E R YR +S
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSS 171
>06_03_1420 - 30053713-30055140
Length = 475
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -3
Query: 397 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTAS 260
+PP L +L+ GD+R+ V LH W+E R YR +S
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSS 171
>06_01_0328 + 2379610-2380359,2380479-2381108,2381222-2381764
Length = 640
Score = 28.7 bits (61), Expect = 3.2
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -3
Query: 325 TTLHAWNETPCARRYY 278
TT AW ETPCA R++
Sbjct: 560 TTTEAWVETPCAHRFH 575
>02_02_0350 +
9239138-9240218,9240755-9240906,9241392-9241457,
9242715-9242951
Length = 511
Score = 28.7 bits (61), Expect = 3.2
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 11 GHEAARLVGPWEVVGNVPIYYLAKPQPRERAWENQR-GKKTLLSLTLVWHCKE 166
G E + L E+ G + I+ L RE A + + K+ L +LTLVW K+
Sbjct: 30 GFELSELGNLTELGGELKIFNLENVATREEANDAKLISKRNLKALTLVWSAKQ 82
>01_06_1406 -
37073548-37073822,37073892-37074111,37074200-37074246,
37074404-37074576,37075161-37075238,37075751-37075813,
37075889-37075961,37076150-37076189,37076302-37076368,
37076719-37078472,37079128-37079230,37080041-37080078,
37080221-37080347,37081944-37082152
Length = 1088
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 333 RKRSSPFKTPA*SGSRTLPGGEFDWGGTSV 422
+KR P K PA S S+ LPG + + G SV
Sbjct: 339 KKRGRPRKYPAPSNSKHLPGTDTELGNDSV 368
>06_01_0149 + 1124427-1126805
Length = 792
Score = 28.3 bits (60), Expect = 4.3
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = +2
Query: 5 GGGHEAARLVGPWEVVGNVPIYYLAKPQPRERAWENQRGKKTLLSLT 145
GGG A ++ W + + + P P E E +R +KT L+
Sbjct: 570 GGGGGVAEIILVWHIATTLLEAHHGPPHPTEHVAEERRSRKTAARLS 616
>03_02_0740 -
10836752-10837052,10837756-10837814,10837901-10838476,
10839965-10841686,10841776-10842173,10842264-10842318,
10842989-10843048,10843444-10843540,10844885-10844955,
10845029-10845109,10846054-10846124,10847951-10848119,
10848521-10848683,10848752-10848942,10849037-10849168
Length = 1381
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -3
Query: 412 PPQSNSPPGSVLEPDHAGVLNGDE 341
P +NS P +V +PD +LNGDE
Sbjct: 739 PTSNNSVPQNVDQPDSKKMLNGDE 762
>12_02_0077 - 13288916-13289659,13289689-13289691
Length = 248
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2
Query: 146 ESSSTGSSFPADSPKPVPLAVVSLDSR 66
++ S G S P DS + VP+ VV+L R
Sbjct: 3 DNQSLGKSLPKDSRRHVPVGVVALKKR 29
>11_01_0498 - 3828516-3829058
Length = 180
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = +3
Query: 21 PQGWWDHGRWW--EMSLSTI*RNHSQGNGLGRISGE 122
P+ WW RWW + + R+ + G G G + GE
Sbjct: 74 PRWWWWRRRWWWRDDGCAGARRSGAGGRGSGGVGGE 109
>08_02_1371 + 26493981-26494471,26497374-26497504,26497947-26498692
Length = 455
Score = 27.9 bits (59), Expect = 5.6
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +1
Query: 256 GRKRCAVD-NIGGRTVFRSKRAEW*RGGNARRRLKLPRDPVRGHCQAGSLTGAVHLSKNN 432
GR+ C+VD +GG F GG A+ R+ + +P +G A + TGA + ++
Sbjct: 48 GRQECSVDLKLGGLGEFG--------GGGAQPRVAVAGEPAKGKGPAAAATGAA-AAASS 98
Query: 433 AGVLRP 450
A RP
Sbjct: 99 APAKRP 104
>06_01_0437 +
3101449-3101521,3101872-3102232,3103766-3103958,
3104051-3104848,3104997-3105143,3106024-3106377
Length = 641
Score = 27.9 bits (59), Expect = 5.6
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +1
Query: 289 GRTVFRSKR--AEW*RGGNARRRLKLPRDPVRGHCQAGSLTGA 411
G+T+ R R A W RG A RR +LP G +AG G+
Sbjct: 36 GQTLTRGPRTCAVWRRGRAAVRRRRLPAASAEGGAKAGRSLGS 78
>04_01_0416 -
5504415-5504590,5509032-5509116,5509190-5509322,
5509426-5510312
Length = 426
Score = 27.9 bits (59), Expect = 5.6
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = -2
Query: 176 PLMSPYNARLESSSTGSSFPADSPKPVPLAVVSLDS 69
PL+ P AR SSTGSSFP S P ++ L S
Sbjct: 47 PLIHPTPARF-ISSTGSSFPPYSEPPPSAPMLELGS 81
>06_03_0507 +
21603472-21603750,21604371-21604463,21605046-21605372,
21605588-21605863,21606095-21607114
Length = 664
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = -2
Query: 407 PVKLPAWQCPRTGSRGSFKRRRAFPPRHHSARLERNTVRPP 285
P++LPA + P T + +R +AF +S R ++T RPP
Sbjct: 398 PLQLPAGEPPVTPAWNDTQRSKAFT---YSIRARKDTNRPP 435
>04_03_0473 -
16332870-16332947,16333013-16333474,16333615-16333739,
16333953-16334022
Length = 244
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 56 NVPIYYLAKPQPRERAWENQRGKKTLLS 139
NVP +L P+ R R W RGK L++
Sbjct: 43 NVPAPFLDIPEQRARNWARARGKMGLVA 70
>02_04_0220 -
21014225-21014386,21014492-21014572,21014739-21014938,
21014999-21015157,21015248-21015377,21015520-21015673,
21015785-21015867,21015981-21016040,21016131-21016217
Length = 371
Score = 27.5 bits (58), Expect = 7.5
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +1
Query: 376 RGHCQAGSLTGAVHLSKNNAGVLRPAQRGQKPRVEQKGKSWL 501
+GH +T A KNNAG L+ Q Q+ Q GK L
Sbjct: 212 KGHLWRSQITAAKEDKKNNAGALQLLQL-QEEACRQSGKDGL 252
>01_06_1759 +
39689410-39689573,39689728-39689923,39690014-39690103,
39690221-39690277,39690391-39690460,39690747-39690811,
39691408-39691462,39691704-39691831,39691919-39691950,
39692205-39692274,39692723-39692824,39692921-39693010,
39693084-39693232,39693620-39693731,39695332-39695412,
39695481-39695705,39695815-39695937,39696021-39696137
Length = 641
Score = 27.5 bits (58), Expect = 7.5
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -3
Query: 448 ALGHLRYSLTDVPPQSNSPPGSVLEP 371
ALGH+ L + P ++ PP ++P
Sbjct: 494 ALGHIELDLPEAPEKAPKPPAQAVDP 519
>10_08_0531 +
18576913-18578058,18578724-18578843,18578924-18578970,
18579588-18579630
Length = 451
Score = 27.1 bits (57), Expect = 9.9
Identities = 10/37 (27%), Positives = 18/37 (48%)
Frame = +2
Query: 44 EVVGNVPIYYLAKPQPRERAWENQRGKKTLLSLTLVW 154
+VV ++P++ L R WE +G K + + W
Sbjct: 185 DVVSDLPVHLLGYGNIAYRLWEASKGSKKISKIWCAW 221
>02_05_0726 -
31252210-31253166,31253667-31253840,31254320-31254364,
31254463-31254573,31254669-31254746,31255170-31255234,
31255358-31255733,31256891-31257035,31257308-31257462,
31259036-31259182
Length = 750
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -2
Query: 194 SPTYATPLMSPYNARLESSSTGSSFPADSPKPVP 93
SP Y P ++ N + S +T S P PK P
Sbjct: 159 SPKYVKPAVAKQNGEVVSRATKSDAPVSKPKVDP 192
>01_01_1195 - 9567023-9567789,9567871-9568120
Length = 338
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 161 YNARLESSSTGSSFPADSPKPVPLAVVSL 75
+ R SSS+ S PA +P P P VV+L
Sbjct: 157 FRRRKPSSSSASPAPAPAPPPPPQPVVAL 185
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,501,514
Number of Sequences: 37544
Number of extensions: 405711
Number of successful extensions: 1532
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1530
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1233951264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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