Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0961
         (600 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY563109-1|AAS99587.1|   46|Tribolium castaneum aristaless protein.    26   0.21 
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    23   2.6  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   3.4  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   4.6  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   6.0  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   6.0  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   6.0  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   7.9  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   7.9  

>AY563109-1|AAS99587.1|   46|Tribolium castaneum aristaless protein.
          Length = 46

 Score = 26.2 bits (55), Expect = 0.21
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 70  HHPDYFCRDEAVMRFGL 120
           H+PD F R+E  M+ GL
Sbjct: 20  HYPDVFTREELAMKIGL 36


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 519 APFFDRNKDEKYSF 560
           APF +R  D KY+F
Sbjct: 363 APFLNRKSDVKYTF 376


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +3

Query: 510 VLKAPFFDRNKDEKYSFRFVQSNFYFTA 593
           + KA  F + K E YS + +     FTA
Sbjct: 310 IKKADSFCKKKLENYSLQLINHRVVFTA 337


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +2

Query: 329 FTNTSPSKSRIYHRIGIATY*VDQKLTARNSVG 427
           F N SPSK++ ++ I      V +K   +N  G
Sbjct: 67  FANVSPSKTKFFNLIKRKDSPVQKKHILKNVFG 99


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -3

Query: 142 YNELLHPSNRNALLLHHGRNSQG 74
           YNE    ++ N LL HH   + G
Sbjct: 103 YNEPYQRTHENMLLRHHEEVADG 125


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -3

Query: 142 YNELLHPSNRNALLLHHGRNSQG 74
           YNE    ++ N LL HH   + G
Sbjct: 103 YNEPYQRTHENMLLRHHEEVADG 125


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -3

Query: 142 YNELLHPSNRNALLLHHGRNSQG 74
           YNE    ++ N LL HH   + G
Sbjct: 103 YNEPYQRTHENMLLRHHEEVADG 125


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = -1

Query: 237 ATTPGVKWLREPIEIYNVNAP 175
           +T     + R+P+++YN   P
Sbjct: 257 STEVSAPFFRQPLDLYNFRVP 277


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 9/30 (30%), Positives = 12/30 (40%)
 Frame = -2

Query: 503 HRSLSSSKLVNYDEEFDELTHR*THSPLSF 414
           H+  SSS   NY        H   H P+ +
Sbjct: 139 HQGFSSSTWCNYSAYSSASRHHVDHQPVPY 168


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,831
Number of Sequences: 336
Number of extensions: 2476
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)