Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0961
(600 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19108| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_49017| Best HMM Match : DUF765 (HMM E-Value=1.8) 29 2.2
SB_27874| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_40947| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_5582| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_43510| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_29217| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_39514| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_58079| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_33475| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_43133| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
>SB_19108| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -3
Query: 139 NELLHPSNRNALLLHHGRNSQGGVNYPYGLIITCSPGDPLV*SAAP 2
N++L P + L H V+ + L +CSPGDPLV +P
Sbjct: 13 NDMLDPKVYDKRLRPHFEGDPVKVSISFFLSNSCSPGDPLVLERSP 58
>SB_49017| Best HMM Match : DUF765 (HMM E-Value=1.8)
Length = 143
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = -3
Query: 97 HHGRNSQGGVNYPYGLIITCSPGDPLV*SAAP 2
HH R QG Y +CSPGDPLV P
Sbjct: 6 HHCRGEQG--KYKSSTSNSCSPGDPLVLERPP 35
>SB_27874| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -3
Query: 118 NRNALLLHHGRNSQGGVNYPYGLIITCSPGDPLV*SAAP 2
N N LL R Q +++ +CSPGDPLV P
Sbjct: 20 NSNRWLLRQQRQPQRHLSHKRSSSNSCSPGDPLVLERPP 58
>SB_40947| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/47 (38%), Positives = 20/47 (42%)
Frame = -3
Query: 142 YNELLHPSNRNALLLHHGRNSQGGVNYPYGLIITCSPGDPLV*SAAP 2
Y L PS + LHH N P +CSPGDPLV P
Sbjct: 8 YKPCLIPSLHTSQALHHPFIQAKPYNIPSN---SCSPGDPLVLERPP 51
>SB_5582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = -3
Query: 115 RNALLLHHGRNSQGGVNYPYGLIIT--CSPGDPLV*SAAP 2
RN + H N +N + ++I+ CSPGDPLV P
Sbjct: 3 RNIIYSHRLTNYSNCLNKCHNIVISNSCSPGDPLVLERPP 42
>SB_43510| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 217
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Frame = -3
Query: 139 NELLHPSNRNALLL---HHGRNSQGG-VNYPYGLIITCSPGDPLV*SAAP 2
N++L+PS+R+ + + GR + V + L +CSPGDPLV P
Sbjct: 60 NQVLNPSSRDDSTIIPTYRGRQDEKKHVVIEWVLSNSCSPGDPLVLERPP 109
>SB_29217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 6/26 (23%)
Frame = -3
Query: 61 PYGLII------TCSPGDPLV*SAAP 2
PYGLI+ +CSPGDPLV P
Sbjct: 2 PYGLIVLTVGSNSCSPGDPLVLERPP 27
>SB_39514| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 144
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 6/26 (23%)
Frame = -3
Query: 61 PYGLII------TCSPGDPLV*SAAP 2
PYGLI+ +CSPGDPLV P
Sbjct: 11 PYGLIVLTVVSNSCSPGDPLVLERPP 36
>SB_58079| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 202
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -3
Query: 130 LHPSNRNALLLHHGRNSQGGVNYPYGLIITCSPGDPLV*SAAP 2
L +NR L +++ V++ G +CSPGDPLV P
Sbjct: 52 LRTANRIPDLFSTLEHTEAEVHWGEGTSNSCSPGDPLVLERPP 94
>SB_33475| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = -3
Query: 76 GGVNYPY--GLIITCSPGDPLV*SAAP 2
GGV P G+ +CSPGDPLV P
Sbjct: 11 GGVGTPNAGGISNSCSPGDPLVLERPP 37
>SB_43133| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 133
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -3
Query: 70 VNYPYGLIITCSPGDPLV*SAAP 2
V P G+ +CSPGDPLV P
Sbjct: 4 VRIPPGVSNSCSPGDPLVLERPP 26
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,516,120
Number of Sequences: 59808
Number of extensions: 334587
Number of successful extensions: 2096
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2096
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1451595000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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