Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0961
         (600 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          25   0.75 
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      25   0.75 
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    24   0.99 
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    22   4.0  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   7.0  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    21   7.0  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    21   7.0  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   7.0  
AB252421-1|BAE80739.1|  122|Apis mellifera GB15078 protein.            21   7.0  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   9.2  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 24.6 bits (51), Expect = 0.75
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -2

Query: 530 EEWSF*NLKHRSLSSSKLVNYDEEFD 453
           +E  + NLK  S +  KL+ Y E+FD
Sbjct: 442 DEIIYPNLKIESFTVDKLITYFEQFD 467



 Score = 23.8 bits (49), Expect = 1.3
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -3

Query: 145 QYNELLHPSNRNALLLHHGRNSQGGVNY 62
           +Y E + P+N +   L+H  N +  +NY
Sbjct: 195 KYKEYIIPANYSGWYLNHDYNLENKLNY 222


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 24.6 bits (51), Expect = 0.75
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -2

Query: 530 EEWSF*NLKHRSLSSSKLVNYDEEFD 453
           +E  + NLK  S +  KL+ Y E+FD
Sbjct: 442 DEIIYPNLKIESFTVDKLITYFEQFD 467


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 24.2 bits (50), Expect = 0.99
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +3

Query: 9   AL*TSGSPGLQVIMSPYG*LTP 74
           +L TSGS G+   +SPYG + P
Sbjct: 309 SLSTSGSSGILTPVSPYGYVKP 330


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +1

Query: 124 GGAAHCIDTLELISQSGWRIYVVDFYG 204
           GG   CI   ++  +SG R+  +D  G
Sbjct: 176 GGITQCIGAFDVTLESGERVTFLDTPG 202


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +3

Query: 222 HQVLSLFSLIYSLVA*EAVPDTPEW 296
           HQ + LF L+YS    +   +T  W
Sbjct: 104 HQAVVLFRLLYSAKTFDVFYNTAVW 128


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 103 LLHHGRNSQGGVNY 62
           LLH  R +QG VNY
Sbjct: 15  LLHPSRCTQGKVNY 28


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 103 LLHHGRNSQGGVNY 62
           LLH  R +QG VNY
Sbjct: 15  LLHPSRCTQGKVNY 28


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +3

Query: 222 HQVLSLFSLIYSLVA*EAVPDTPEW 296
           HQ + LF L+YS    +   +T  W
Sbjct: 104 HQAVVLFRLLYSAKTFDVFYNTAVW 128


>AB252421-1|BAE80739.1|  122|Apis mellifera GB15078 protein.
          Length = 122

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -1

Query: 228 PGVKWLREPIEIYN 187
           P + WL++ IE+Y+
Sbjct: 52  PEITWLKDGIELYH 65


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -3

Query: 556 EYFSSLLRSKNGAFKTSSTGHCPRR 482
           E FSS  ++KN   K  +T   P R
Sbjct: 513 ELFSSQQKTKNNLMKLETTPVLPSR 537


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,378
Number of Sequences: 438
Number of extensions: 2837
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17604432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)