Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0956
         (577 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7T754 Cluster: Predicted protein; n=1; Nematostella ve...    36   0.68 
UniRef50_A0D0Q3 Cluster: Chromosome undetermined scaffold_33, wh...    33   6.4  

>UniRef50_A7T754 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 202

 Score = 35.9 bits (79), Expect = 0.68
 Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = -1

Query: 556 QFYCLATTLQLSFLY-TPSKYFLSYTCPYYPVLTKHGLSSLI 434
           ++ C A +L L + Y T +KY LS+ C YY    KH LSS +
Sbjct: 28  RYLCKALSLFLCYYYGTFAKYCLSFLCYYYCTFAKHCLSSCV 69


>UniRef50_A0D0Q3 Cluster: Chromosome undetermined scaffold_33, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_33,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 836

 Score = 32.7 bits (71), Expect = 6.4
 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 10/57 (17%)
 Frame = +1

Query: 28  CIKYCVNFKITKPNYLN------KDLIVVAY----LLFN*NK*FSGSLCIYCVVKKY 168
           C+ YC+ +K+ + N+L       KDL +  +    +LFN N     S+C+YC  K +
Sbjct: 519 CLDYCLLYKLNRENFLKIISSNVKDLEIANFIKDQILFNNNYSIIDSICLYCQDKTH 575


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 478,828,344
Number of Sequences: 1657284
Number of extensions: 7929546
Number of successful extensions: 11842
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 11622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11841
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39571085965
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)