Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0956
         (577 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   7.5  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   7.5  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   7.5  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -2

Query: 258 LIRSF*KKTYLVIARYILHLVSNPE 184
           LI S    TYLV+ +Y+L   S P+
Sbjct: 20  LILSNKNNTYLVLNKYLLVKHSKPK 44


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 517 LYTPSKYFLSYTCPYYPV 464
           +Y PS YF+S T    P+
Sbjct: 484 MYRPSIYFISKTLAESPI 501


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 517 LYTPSKYFLSYTCPYYPV 464
           +Y PS YF+S T    P+
Sbjct: 484 MYRPSIYFISKTLAESPI 501


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,294
Number of Sequences: 336
Number of extensions: 2362
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14308417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)