Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0953
(478 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0532 - 16824394-16824447,16824545-16824665,16824748-168248... 45 4e-05
02_03_0280 - 17256524-17256733,17256838-17256958,17257318-172574... 44 5e-05
08_02_1322 + 26131395-26131599,26132382-26132468,26133119-261333... 41 6e-04
12_01_0295 + 2235209-2235263,2236182-2236361,2236478-2236567,223... 35 0.030
09_04_0633 - 19123930-19124009,19124240-19124344,19124453-191245... 34 0.068
01_06_1791 - 39907362-39907453,39907682-39907753,39907941-399080... 33 0.090
01_05_0372 + 21541220-21541457,21541832-21541912,21542027-215420... 31 0.36
01_05_0366 + 21419270-21419312,21420372-21420458,21420625-214209... 31 0.36
11_01_0294 + 2212807-2212876,2213664-2213843,2214505-2214594,221... 31 0.48
05_05_0095 - 22347552-22347696,22347988-22348094,22348114-223482... 31 0.48
01_06_1316 + 36245368-36245507,36247229-36247315,36248334-362484... 30 0.84
02_05_0956 - 33064104-33066425 30 1.1
10_08_0705 + 20032111-20032437,20032525-20032896 29 2.6
07_01_0635 + 4753919-4754090,4754200-4754258,4754377-4754432,475... 29 2.6
09_04_0747 + 19892090-19893304,19893471-19893602,19894168-198942... 28 3.4
03_03_0065 + 14192725-14192813,14193004-14193088,14193971-141940... 28 3.4
12_02_0134 - 14071190-14071435,14071800-14071988,14072114-140721... 28 4.5
01_01_0378 - 2953514-2954341,2954388-2954504 28 4.5
08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,322... 27 5.9
06_01_1101 - 9044679-9045320,9045484-9045890,9046020-9046274,904... 27 5.9
>04_03_0532 -
16824394-16824447,16824545-16824665,16824748-16824875,
16825457-16825603,16825682-16825807,16825895-16826160,
16826259-16826453,16826577-16826657,16826756-16826830,
16827270-16827530,16827633-16827719,16827844-16828060
Length = 585
Score = 44.8 bits (101), Expect = 4e-05
Identities = 33/130 (25%), Positives = 60/130 (46%)
Frame = +3
Query: 69 DNEVLQGLDLALTLMYRGEECILQLAPRFAYGEMGLKPGESLGLVGQCDEPKYKGPIIGP 248
+ +V++GLD + M +GE +++L P+ A+G K + L +V
Sbjct: 335 EEQVIEGLDRTVVTMKKGEVALVRLPPQHAFGSTETK--QDLAVVPA-----------NS 381
Query: 249 DTWLEAKLVLHDWSEEPEHDVLSIAEKMEIGIRRRARGNWWYGRDEPQLAVQLYRRALDI 428
W E +LV + E+ D+ AEK+E +++ GN W+ + A + Y +A
Sbjct: 382 TVWYEVELVSFE-KEKESWDLKDNAEKIEAAAKKKDEGNVWFKMGKYAKASKRYEKAAKY 440
Query: 429 LDESEGGITD 458
+ E + TD
Sbjct: 441 I-EYDSSFTD 449
Score = 40.3 bits (90), Expect = 8e-04
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +3
Query: 54 KIYLGDNEVLQGLDLALTLMYRGEECILQLAPRFAYGEMGLKP 182
K LG EV++G D + M +GE+ + + P AYGE G P
Sbjct: 96 KFSLGQGEVIKGWDEGIKTMKKGEQAVFTVPPELAYGEAGSPP 138
Score = 35.1 bits (77), Expect = 0.030
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +3
Query: 18 DSNNIVEKRDQIKIYLGDNEVLQGLDLALTLMYRGEECILQLAPRFAYGEMGLKP 182
+ +V K D ++ + D L A+ M +GE+ +L + P++ +GE G KP
Sbjct: 196 EDGTVVSKSDGVEFAVKDGYFCPALSKAVKTMKKGEKVLLTVKPQYGFGEQG-KP 249
>02_03_0280 -
17256524-17256733,17256838-17256958,17257318-17257445,
17257603-17257671,17257757-17257882,17257970-17258235,
17258341-17258535,17258614-17258694,17258729-17258851,
17258941-17259201,17260044-17260130,17260260-17260578
Length = 661
Score = 44.4 bits (100), Expect = 5e-05
Identities = 30/123 (24%), Positives = 62/123 (50%), Gaps = 2/123 (1%)
Frame = +3
Query: 69 DNEVLQGLDLALTLMYRGEECILQLAPRFAYGEMGLKPGESLGLVGQCDEPKYKGPIIGP 248
+++V++GLD A+ M +GE ++ + P +A+G DE + ++ P
Sbjct: 385 EDQVVEGLDKAVLSMKKGEVALVTIPPEYAFGS---------------DETRQDLSVVPP 429
Query: 249 DT--WLEAKLVLHDWSEEPEHDVLSIAEKMEIGIRRRARGNWWYGRDEPQLAVQLYRRAL 422
++ + E +LV D E+ D+ EK+E +++ GN W+ ++ A + Y +AL
Sbjct: 430 NSTVYYEVELVSFD-KEKESWDMKENTEKIEAAAKKKDEGNAWFKMEKYARASKRYGKAL 488
Query: 423 DIL 431
+ +
Sbjct: 489 NFI 491
Score = 41.1 bits (92), Expect = 4e-04
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +3
Query: 54 KIYLGDNEVLQGLDLALTLMYRGEECILQLAPRFAYGEMGLKP 182
K LG +V++G DL + M +GE I + P AYGE G P
Sbjct: 130 KFTLGQGQVIKGWDLGIKTMKKGENAIFTIPPELAYGEDGSPP 172
>08_02_1322 +
26131395-26131599,26132382-26132468,26133119-26133372,
26133430-26133526,26133613-26133693,26133782-26133976,
26134093-26134182,26134296-26134471,26134565-26134687,
26134799-26134945,26135027-26135163,26135247-26135364,
26135462-26135518
Length = 588
Score = 40.7 bits (91), Expect = 6e-04
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +3
Query: 54 KIYLGDNEVLQGLDLALTLMYRGEECILQLAPRFAYGEMGLKP 182
K LG +V++G DL + M +GE + + P AYGE G P
Sbjct: 92 KFKLGQGQVIKGWDLGIKTMKKGENAVFTIPPDLAYGESGSPP 134
Score = 29.9 bits (64), Expect = 1.1
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +3
Query: 69 DNEVLQGLDLALTLMYRGEECILQLAPRFAYG 164
+ EV+ G+D A+ M GE ++ + P +A+G
Sbjct: 336 EEEVIDGIDRAVLNMKNGEVALVTIPPEYAFG 367
>12_01_0295 +
2235209-2235263,2236182-2236361,2236478-2236567,
2236947-2237131,2237200-2237358,2237437-2237589,
2237938-2238264
Length = 382
Score = 35.1 bits (77), Expect = 0.030
Identities = 31/132 (23%), Positives = 61/132 (46%), Gaps = 3/132 (2%)
Frame = +3
Query: 36 EKRDQIKIYLG-DNEVLQGLDLALTLMYRGEECILQLAPRFAYGEMGLKPGESLGLVGQC 212
+++ I++ LG + + + GL + ++ M GE +L + YG+ G S V
Sbjct: 97 QEQHSIELVLGKEKKEMTGLGIGVSNMRSGERALLHVNWELGYGKEG---SFSFPNVPPM 153
Query: 213 DEPKYKGPIIGPDTWLEAKLVLHD--WSEEPEHDVLSIAEKMEIGIRRRARGNWWYGRDE 386
+ Y+ +IG D E L D + +++ E++E RR+ GN ++ +
Sbjct: 154 ADLVYEVELIGFDDVKEVPRKLTDNVKLQGKARSDMTVEERIEAADRRKIEGNEYFKEKK 213
Query: 387 PQLAVQLYRRAL 422
+ A+Q Y A+
Sbjct: 214 FEEAMQQYEMAI 225
>09_04_0633 -
19123930-19124009,19124240-19124344,19124453-19124543,
19124647-19124709,19126318-19126368,19126878-19126962,
19127102-19127283,19128493-19128582
Length = 248
Score = 33.9 bits (74), Expect = 0.068
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +3
Query: 18 DSNNIVEKRDQIKIYLGDNEVLQGLDLALTLMYRGEECILQLAPRFAYGEMGLKP 182
D ++ E+ D I+ LG +V++G D + M GE+ L++ + YG G P
Sbjct: 165 DFDSSYERGDPIEFELGTGQVIKGWDQGILGMCVGEKRKLKIPSKLGYGAQGSPP 219
>01_06_1791 -
39907362-39907453,39907682-39907753,39907941-39908045,
39908212-39908302,39908787-39908849,39909448-39909497,
39909632-39909716
Length = 185
Score = 33.5 bits (73), Expect = 0.090
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +3
Query: 36 EKRDQIKIYLGDNEVLQGLDLALTLMYRGEECILQLAPRFAYGEMGLKP 182
++ D + LG+ +V++G D L M GE+ L++ + YGE G P
Sbjct: 80 DRGDPFEFTLGNGQVIKGWDQGLLGMCVGEKRKLKIPAKMGYGERGSPP 128
>01_05_0372 +
21541220-21541457,21541832-21541912,21542027-21542092,
21543050-21543178,21544619-21544674,21545451-21545732
Length = 283
Score = 31.5 bits (68), Expect = 0.36
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +3
Query: 18 DSNNIVEKRDQIKIYLGDNEVLQGLDLALTLMYRGEECILQLAPRFAYGEMG 173
+ N V K +++++ L L+ A+ M GEE I + PR+A+G G
Sbjct: 87 EDGNSVSKSERLELNLASRTALK---YAVKTMREGEEAIFIVKPRYAFGAQG 135
>01_05_0366 +
21419270-21419312,21420372-21420458,21420625-21420900,
21421560-21421634,21421736-21421816,21422117-21422308,
21422756-21422772
Length = 256
Score = 31.5 bits (68), Expect = 0.36
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 33 VEKRDQIKIYLGDNEVLQGLDLALTLMYRGEECILQLAPRFAYGEMG 173
V K + ++ L D A+ M GEE +L + P++A+GE G
Sbjct: 148 VSKSEGVEFSLTDGFFCPAFAHAVHTMKEGEEAVLIVKPKYAFGEQG 194
>11_01_0294 +
2212807-2212876,2213664-2213843,2214505-2214594,
2215054-2215238,2215399-2215521,2215593-2215745,
2216090-2216416
Length = 375
Score = 31.1 bits (67), Expect = 0.48
Identities = 29/130 (22%), Positives = 58/130 (44%), Gaps = 1/130 (0%)
Frame = +3
Query: 36 EKRDQIKIYLG-DNEVLQGLDLALTLMYRGEECILQLAPRFAYGEMGLKPGESLGLVGQC 212
+++ I++ +G + + + GL + + M GE +L + YG+ G S V
Sbjct: 102 QEQHPIELVIGKEKKQMSGLGIGVGNMRSGERALLHVGWELGYGKEG---SFSFPNVPPM 158
Query: 213 DEPKYKGPIIGPDTWLEAKLVLHDWSEEPEHDVLSIAEKMEIGIRRRARGNWWYGRDEPQ 392
+ Y+ +IG D D E +++ E++E RR+ GN ++ + +
Sbjct: 159 ADLLYEVELIGFD----------DVKEGKARSDMTVEERIEAADRRKIEGNEYFKEKKFE 208
Query: 393 LAVQLYRRAL 422
A+Q Y A+
Sbjct: 209 EAMQQYEMAI 218
>05_05_0095 -
22347552-22347696,22347988-22348094,22348114-22348236,
22348325-22348458,22348766-22348874
Length = 205
Score = 31.1 bits (67), Expect = 0.48
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 63 LGDNEVLQGLDLALTLMYRGEECILQLAPRFAYGEMGLKP 182
+G V++ D+AL M GE + P +AYG G P
Sbjct: 64 IGQGAVIKAWDIALRTMKVGEVAKITCKPEYAYGSAGSPP 103
>01_06_1316 +
36245368-36245507,36247229-36247315,36248334-36248439,
36249028-36249204,36249296-36249375,36249432-36249440,
36249474-36249566,36249788-36249947
Length = 283
Score = 30.3 bits (65), Expect = 0.84
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +3
Query: 63 LGDNEVLQGLDLALTLMYRGEECILQLAPRFAYGEMGLKP 182
+G+ V++ D+A+ M GE + P +AYG G P
Sbjct: 153 IGEGTVIKAWDIAVKTMKVGEVAKITCKPEYAYGAAGSPP 192
>02_05_0956 - 33064104-33066425
Length = 773
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = -1
Query: 259 SHVSGPIIGPLYLGSSHCPTNPRLSPGL 176
S V+G GP LGS H N L PGL
Sbjct: 602 SSVNGRAAGPFELGSGHVDPNNALDPGL 629
>10_08_0705 + 20032111-20032437,20032525-20032896
Length = 232
Score = 28.7 bits (61), Expect = 2.6
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 294 EPEHDVLSIAEKMEIGIRRRARGNWWYGRD 383
E E V+ EKME+G+R ++G ++G D
Sbjct: 128 EGEKKVVEALEKMEVGLRECSKGKPFFGGD 157
>07_01_0635 +
4753919-4754090,4754200-4754258,4754377-4754432,
4754698-4754842,4755506-4755580,4755844-4755933,
4756218-4756295,4757879-4758376,4758512-4758997
Length = 552
Score = 28.7 bits (61), Expect = 2.6
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 78 VLQGLDLALTLMYRGEECILQLAPRFAYGEMGLK 179
VL+GLDL + M G + ++ + P AYG+ G++
Sbjct: 183 VLKGLDLGVEGMKVGGQRLIIVPPELAYGKKGVQ 216
>09_04_0747 +
19892090-19893304,19893471-19893602,19894168-19894215,
19894697-19894766,19894936-19894963,19896021-19896519
Length = 663
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +3
Query: 129 CILQLAPRFAYGEMGLKPGESLGLVGQCDEPKYKGPIIGPDTWL 260
C L PR GL P E++ + + + P+IGPD +L
Sbjct: 68 CALLFFPRELVSSCGLYPSEAILIDEAWSQSIWDVPVIGPDDFL 111
>03_03_0065 +
14192725-14192813,14193004-14193088,14193971-14194040,
14194730-14194827,14194931-14195101,14196192-14196224,
14196762-14196820,14197143-14197190,14197399-14197480,
14198317-14198475,14199036-14199093,14199801-14199949,
14200403-14200503,14200574-14200643,14201088-14201147,
14201883-14201939,14202247-14202315,14202485-14202562,
14202996-14203097,14203203-14203274,14203361-14203648
Length = 665
Score = 28.3 bits (60), Expect = 3.4
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 66 GDNEVLQGLDLALTLMYRGEECILQLAPRFAYGEMGLKP 182
G+ V +G ++ + LM GE+ I+ P FAY + P
Sbjct: 364 GEGLVPEGFEMCVRLMLPGEKSIVTCPPDFAYDKFPRLP 402
>12_02_0134 -
14071190-14071435,14071800-14071988,14072114-14072194,
14072261-14072404,14072528-14072761,14072836-14073981,
14074863-14074922,14075178-14075420,14075509-14075607,
14076196-14076367,14076597-14076735,14077514-14077624,
14077695-14077797,14077885-14077962,14078054-14078122,
14078203-14078275,14078891-14078975,14079473-14079536,
14079963-14080073,14080139-14080213,14080306-14080398,
14080982-14081056,14081172-14081261
Length = 1259
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -2
Query: 120 LCTLKLMLGPNLAIPHCLLNIFLSDLFSPQCCY 22
LC L L P +A H LL ++LSD C Y
Sbjct: 734 LCETALALFPRMATIHTLLKLWLSDGSEALCRY 766
>01_01_0378 - 2953514-2954341,2954388-2954504
Length = 314
Score = 27.9 bits (59), Expect = 4.5
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +1
Query: 205 DSVMNPSIKDLLLDQTHGLK 264
+SV+ PS KD++ D THGL+
Sbjct: 33 ESVLIPSWKDVVYDATHGLR 52
>08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,
3220080-3223195,3223303-3223561,3223665-3223951,
3224029-3224364,3224463-3224604,3224690-3224910,
3224990-3225151,3225242-3225400,3225488-3225787,
3226306-3226569,3227370-3227453
Length = 1855
Score = 27.5 bits (58), Expect = 5.9
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Frame = -1
Query: 244 PIIGPLYLGSS---HCPTNPRLSPG--LSPISP*ANLGASCKIHSSPLYIKVNARSKPCN 80
P+ P Y SS + P++P SPG SP SP + + +SP Y + P +
Sbjct: 1537 PVPSPGYTPSSGGGYSPSSPVYSPGPGYSPTSPSYSPASPSYSPTSPSYTPGSPTYSPTS 1596
Query: 79 TSLSP 65
S SP
Sbjct: 1597 PSYSP 1601
>06_01_1101 -
9044679-9045320,9045484-9045890,9046020-9046274,
9046375-9046498,9047237-9047289,9047388-9047648,
9047795-9047848,9047975-9048458,9048554-9048592
Length = 772
Score = 27.5 bits (58), Expect = 5.9
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 339 GIRRRARGNWWYGRDEPQLAVQ 404
G R +G WW+ R+E LA Q
Sbjct: 7 GAAARRKGGWWWWREEAVLAYQ 28
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,092,324
Number of Sequences: 37544
Number of extensions: 298202
Number of successful extensions: 920
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 918
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 979080328
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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