Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0952
(488 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0440 - 3358786-3358918,3359861-3360146,3360460-3360538 183 6e-47
12_01_0443 - 3498848-3498980,3500504-3500789,3500928-3501006 183 8e-47
05_01_0043 - 295041-295173,296252-296537,296616-296697 182 1e-46
01_07_0267 + 42410174-42410252,42410679-42411097 171 3e-43
02_04_0181 - 20705307-20705439,20705991-20706037,20706181-207062... 157 4e-39
01_05_0664 + 24122958-24123070,24123184-24123261,24125040-241252... 76 1e-14
01_06_0836 - 32321431-32321556,32321656-32321872,32321975-323235... 37 0.010
07_03_1215 + 24937016-24937229,24937418-24937623,24938135-249382... 32 0.28
06_03_0363 + 19904002-19905792 32 0.28
12_01_0229 + 1731288-1732513,1733037-1733106,1733267-1734001 30 0.87
04_03_0301 + 14094370-14094584,14096694-14096727,14098084-140980... 30 0.87
09_01_0019 + 403078-404211 30 1.1
05_05_0070 + 22148595-22148907,22148988-22149104,22149196-221493... 30 1.1
04_03_0747 - 19251617-19251781,19252377-19252502,19252606-192527... 29 1.5
03_01_0551 - 4113134-4113272,4113347-4113507,4113666-4114319 29 1.5
10_08_0401 + 17629912-17630376 29 2.0
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012... 29 2.0
08_02_0341 + 15994817-15994852,15995371-15995439,15995667-159959... 29 2.0
03_06_0209 - 32377045-32378008,32378086-32378210,32378772-323788... 29 2.0
04_04_1125 + 31085106-31085714 29 2.6
03_04_0170 - 17982970-17983410,17983535-17983672,17983815-17983826 28 3.5
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 28 4.6
09_06_0081 + 20745627-20748144,20748211-20748308 28 4.6
05_04_0242 + 19336663-19336789,19337071-19337290,19337392-193374... 28 4.6
01_06_0708 + 31363851-31364063,31364314-31364439,31364646-31365755 28 4.6
12_01_0790 + 7216452-7216489,7216664-7216722,7217268-7218750,721... 27 6.1
10_08_0520 - 18495118-18498237 27 6.1
03_05_1081 + 30235677-30236474 27 6.1
01_06_0027 - 25742122-25742310,25742481-25742553,25743219-25744159 27 6.1
01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647 27 6.1
11_01_0066 - 536281-537196,537397-537452 27 8.1
06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,805... 27 8.1
04_03_0831 - 20133298-20133401,20133500-20133586,20133984-201340... 27 8.1
>11_01_0440 - 3358786-3358918,3359861-3360146,3360460-3360538
Length = 165
Score = 183 bits (446), Expect = 6e-47
Identities = 86/126 (68%), Positives = 105/126 (83%), Gaps = 1/126 (0%)
Frame = +3
Query: 114 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLV 293
PFFG +GAASA+IFS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL+
Sbjct: 12 PFFGFLGAASALIFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 71
Query: 294 VAVLIAGALQEPAN-YPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLF 470
+AV+I+ + A Y L+ G+ HL +GLA G +GLAAG AIGIVGDAGVR AQQP+LF
Sbjct: 72 IAVIISTGINPKAKPYYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLF 131
Query: 471 VGMILI 488
VGMILI
Sbjct: 132 VGMILI 137
Score = 32.7 bits (71), Expect = 0.16
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +3
Query: 108 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAM--SVMRPELIMKSIIPVVMAGIIAI 281
Y F G +S + G A G A G A + + +P+L + I+ ++ A +A+
Sbjct: 87 YYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALAL 146
Query: 282 YGLVVAVLIA 311
YGL+V ++++
Sbjct: 147 YGLIVGIILS 156
>12_01_0443 - 3498848-3498980,3500504-3500789,3500928-3501006
Length = 165
Score = 183 bits (445), Expect = 8e-47
Identities = 85/126 (67%), Positives = 105/126 (83%), Gaps = 1/126 (0%)
Frame = +3
Query: 114 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLV 293
PFFG +GAASA++FS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL+
Sbjct: 12 PFFGFLGAASALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 71
Query: 294 VAVLIAGALQEPAN-YPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLF 470
+AV+I+ + A Y L+ G+ HL +GLA G +GLAAG AIGIVGDAGVR AQQP+LF
Sbjct: 72 IAVIISTGINPKAKPYYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLF 131
Query: 471 VGMILI 488
VGMILI
Sbjct: 132 VGMILI 137
Score = 32.7 bits (71), Expect = 0.16
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +3
Query: 108 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAM--SVMRPELIMKSIIPVVMAGIIAI 281
Y F G +S + G A G A G A + + +P+L + I+ ++ A +A+
Sbjct: 87 YYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALAL 146
Query: 282 YGLVVAVLIA 311
YGL+V ++++
Sbjct: 147 YGLIVGIILS 156
>05_01_0043 - 295041-295173,296252-296537,296616-296697
Length = 166
Score = 182 bits (444), Expect = 1e-46
Identities = 85/126 (67%), Positives = 105/126 (83%), Gaps = 1/126 (0%)
Frame = +3
Query: 114 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLV 293
PFFG +GAASA++FS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL+
Sbjct: 13 PFFGFLGAASALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 72
Query: 294 VAVLIAGALQEPAN-YPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLF 470
+AV+I+ + A Y L+ G+ HL +GLA G +GLAAG AIGIVGDAGVR AQQP+LF
Sbjct: 73 IAVIISTGINPKAKPYFLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLF 132
Query: 471 VGMILI 488
VGMILI
Sbjct: 133 VGMILI 138
Score = 33.9 bits (74), Expect = 0.070
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Frame = +3
Query: 99 NPIYGPFF---GVMGAASAIIFSALGAAYGTAKSGTGIAAM--SVMRPELIMKSIIPVVM 263
NP P+F G +S + G A G A G A + + +P+L + I+ ++
Sbjct: 82 NPKAKPYFLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIF 141
Query: 264 AGIIAIYGLVVAVLIA 311
A +A+YGL+V ++++
Sbjct: 142 AEALALYGLIVGIILS 157
>01_07_0267 + 42410174-42410252,42410679-42411097
Length = 165
Score = 171 bits (415), Expect = 3e-43
Identities = 81/132 (61%), Positives = 100/132 (75%), Gaps = 1/132 (0%)
Frame = +3
Query: 96 NNPIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGII 275
N + PF G +GAA A++FS +GAAYGTA+SG G+A M VMRPEL+MKSI+PVVMAG++
Sbjct: 6 NGDEFAPFLGFIGAALALVFSCMGAAYGTARSGVGVAHMGVMRPELVMKSIVPVVMAGVL 65
Query: 276 AIYGLVVAVLIAGALQEPA-NYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTA 452
IYGL++AV+I + A Y + G +HL AGLA G LAAG AIG+VGDAGVR A
Sbjct: 66 GIYGLIIAVIITTGINPTAMPYYHFDGSVHLAAGLATGLCALAAGLAIGVVGDAGVRANA 125
Query: 453 QQPRLFVGMILI 488
QQP+LFVGMILI
Sbjct: 126 QQPKLFVGMILI 137
Score = 31.9 bits (69), Expect = 0.28
Identities = 16/60 (26%), Positives = 33/60 (55%)
Frame = +3
Query: 132 GAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIA 311
G A+ + A G A G G+ A + +P+L + I+ ++ A + +YGL+V ++++
Sbjct: 99 GLATGLCALAAGLAIGVV-GDAGVRA-NAQQPKLFVGMILILIFAEALGLYGLIVGIILS 156
>02_04_0181 -
20705307-20705439,20705991-20706037,20706181-20706229,
20706685-20707055
Length = 199
Score = 157 bits (381), Expect = 4e-39
Identities = 72/111 (64%), Positives = 92/111 (82%), Gaps = 1/111 (0%)
Frame = +3
Query: 114 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLV 293
PFFG +GAA+A++FS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL+
Sbjct: 14 PFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 73
Query: 294 VAVLIAGALQEPAN-YPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVR 443
+AV+I+ + A Y L+ G+ HL +GLA G +GLAAG AIGIVGDAGVR
Sbjct: 74 IAVIISTGINPKAKPYFLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVR 124
Score = 28.3 bits (60), Expect = 3.5
Identities = 9/33 (27%), Positives = 23/33 (69%)
Frame = +3
Query: 213 SVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIA 311
+ +P+L + I+ ++ A +A+YGL+V ++++
Sbjct: 158 NAQQPKLFVGMILILIFAEALALYGLIVGIILS 190
>01_05_0664 +
24122958-24123070,24123184-24123261,24125040-24125210,
24125288-24125456
Length = 176
Score = 76.2 bits (179), Expect = 1e-14
Identities = 41/129 (31%), Positives = 71/129 (55%), Gaps = 6/129 (4%)
Frame = +3
Query: 120 FGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVA 299
F +G A +I S LGAA+G +G+ + ++ P + K++I V+ +AIYG++VA
Sbjct: 20 FSAIGIAVSIGVSVLGAAWGIFITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVA 79
Query: 300 VLIAGALQEP----ANYP--LYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQP 461
+++ L+ ++P L G+ +GL VGF+ L G +GI+G + AQ
Sbjct: 80 IILQTKLESVPTALVHHPESLRAGYAIFASGLIVGFANLVCGVCVGIIGSSCALSDAQNS 139
Query: 462 RLFVGMILI 488
LFV +++I
Sbjct: 140 SLFVKILVI 148
>01_06_0836 - 32321431-32321556,32321656-32321872,32321975-32323590,
32323670-32323753,32323834-32324104,32324294-32324547,
32324709-32324918,32325839-32326024
Length = 987
Score = 36.7 bits (81), Expect = 0.010
Identities = 24/78 (30%), Positives = 38/78 (48%)
Frame = -1
Query: 488 NKNHSDE*PRLLSSTTHACISHDAYGETGSQTRESYSQTSTQVDEPFVKGVVGWLLEGTS 309
+KN DE P LS+T C H+ YG+ G + + ++ VD P+V G+V +
Sbjct: 883 SKNEHDEAPLGLSNT---CKEHE-YGDKGPENLTKPGEPASSVDVPYVNGIVD-NSDSVQ 937
Query: 308 NQDSHDQTVDGNNTRHDD 255
+ S + TV T + D
Sbjct: 938 EEPSVEATVSATETSNVD 955
>07_03_1215 +
24937016-24937229,24937418-24937623,24938135-24938207,
24938619-24938812
Length = 228
Score = 31.9 bits (69), Expect = 0.28
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -2
Query: 418 PMAKPAARPENPTAKPAPKWM 356
P AKPAA+P+ P KP P+ M
Sbjct: 91 PAAKPAAKPKKPPVKPLPEMM 111
>06_03_0363 + 19904002-19905792
Length = 596
Score = 31.9 bits (69), Expect = 0.28
Identities = 28/107 (26%), Positives = 44/107 (41%), Gaps = 6/107 (5%)
Frame = +3
Query: 102 PIYGPFFGVMGAASAIIFSALGAAYGTAKSGTG-----IAAMSVMRPELIMKSIIPVVMA 266
PIY +GAA +FS+L + T +A ++R + + P +
Sbjct: 400 PIYATVAVTLGAACVALFSSLDVLASVSSISTLFIFALVAVALLVRRYHVAGATTPGQLR 459
Query: 267 GIIAIYGLVVAVLIAGALQEPANYPL-YKGFIHLGAGLAVGFSGLAA 404
+A LVV I + + Y + G+ G G A G +GLAA
Sbjct: 460 TFLAFLALVVLSSIGVSAYYNSRYARRWPGYAAFGCGWAAGAAGLAA 506
>12_01_0229 + 1731288-1732513,1733037-1733106,1733267-1734001
Length = 676
Score = 30.3 bits (65), Expect = 0.87
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +3
Query: 315 ALQEPANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILI 488
AL+ P P+ +G + LG + V +GL +V A VRG GM+L+
Sbjct: 333 ALEAP---PMPRGSVGLGMAVRVAMAGLGTNRVAAVVSAAAVRGHNAGGGALEGMVLV 387
>04_03_0301 +
14094370-14094584,14096694-14096727,14098084-14098095,
14098400-14098574,14099064-14099299,14099396-14100457
Length = 577
Score = 30.3 bits (65), Expect = 0.87
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -1
Query: 380 SQTSTQVDEPFVKGVVGWLLEGTSNQDSHDQTVDGNNTRHDDR 252
S+ ++ E KG+VG SNQ HD T D +T D++
Sbjct: 190 SRLDNKIAEVDTKGIVG-TKPSASNQHQHDGTTDSRHTVEDEK 231
>09_01_0019 + 403078-404211
Length = 377
Score = 29.9 bits (64), Expect = 1.1
Identities = 17/61 (27%), Positives = 23/61 (37%)
Frame = -1
Query: 293 DQTVDGNNTRHDDRNDRLHDQLRPHHRHXXXXXXXXXXXXXXXXGAEDDSRRRPHNSKEG 114
D T D + + +DR R H + + HHR + SRRR H E
Sbjct: 293 DDTSDEDESGGEDRRRRRHRKRQHHHRKGASDGDSGSGASDSADDRKRSSRRRRHRKSES 352
Query: 113 S 111
S
Sbjct: 353 S 353
>05_05_0070 +
22148595-22148907,22148988-22149104,22149196-22149350,
22149987-22150061,22150179-22150469,22150942-22151292,
22151390-22151794
Length = 568
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = +2
Query: 206 RHVGDEA*ADHEVDHSCRHGGYYCHLRSGRGCPDCWCPP 322
R V + AD D CR G SG + +CPP
Sbjct: 16 REVSEALTADSSADEECRRGSSSSSASSGDASSESYCPP 54
>04_03_0747 -
19251617-19251781,19252377-19252502,19252606-19252716,
19252931-19253679,19254034-19254167,19254595-19254740,
19255166-19255336,19255977-19256828
Length = 817
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -2
Query: 445 PRTPASPTMPMAKPAARPENPTAKPAPKWMNPL 347
P PA MP P P PT P P W PL
Sbjct: 132 PPPPARTPMPTPTPTPTP-TPTRPPVPVWAAPL 163
>03_01_0551 - 4113134-4113272,4113347-4113507,4113666-4114319
Length = 317
Score = 29.5 bits (63), Expect = 1.5
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 311 WCPPGASQLPPLQRVHPLG 367
W PPG +LPPL +H G
Sbjct: 44 WAPPGEPRLPPLLLIHGFG 62
>10_08_0401 + 17629912-17630376
Length = 154
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 126 VMGAASAIIFSALGAAYGTAKSGTGIAA 209
V GAA+ F+AL AY A+ G+AA
Sbjct: 111 VAGAAAVAAFAALAVAYAVARRRVGVAA 138
>09_04_0081 -
14400293-14400397,14400953-14401036,14401144-14401214,
14401293-14401380,14401487-14401678,14401772-14402704
Length = 490
Score = 29.1 bits (62), Expect = 2.0
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -2
Query: 451 AVPRTPASPTMPMAKPAARPENPTAKPAPKWMNPL 347
A P P P P PAA P P PAP+ P+
Sbjct: 219 APPPPPPPPPSPHRHPAAHPPPPPHHPAPRPPPPM 253
>08_02_0341 +
15994817-15994852,15995371-15995439,15995667-15995973,
15996231-15996253
Length = 144
Score = 29.1 bits (62), Expect = 2.0
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -1
Query: 317 GTSNQDSHDQTVDGNNTRHDDRNDRL 240
G + + HD ++DG N +DD D L
Sbjct: 98 GAEDDNGHDVSIDGLNANNDDNGDEL 123
>03_06_0209 -
32377045-32378008,32378086-32378210,32378772-32378816,
32379009-32379295,32379778-32381509,32381631-32381971,
32383753-32383876,32384484-32384722,32385156-32385534
Length = 1411
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +3
Query: 309 AGALQEPANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVR 443
+GA EP P+ + G A+ F G AG A+G+VG++G R
Sbjct: 9 SGAAAEPPPTPVAR----YDRGGALIFGGRFAGVAVGVVGESGSR 49
>04_04_1125 + 31085106-31085714
Length = 202
Score = 28.7 bits (61), Expect = 2.6
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 445 PRTPASPTMPMAKPAARPENPTAK 374
P TPA+PT P PA P PT K
Sbjct: 89 PATPATPTTP-PTPAPAPSTPTGK 111
>03_04_0170 - 17982970-17983410,17983535-17983672,17983815-17983826
Length = 196
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 357 IHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQP 461
+HL G+AVG GL G + GD R A+ P
Sbjct: 160 VHLDVGVAVGDQGLEVGLL--VAGDEAERAQARAP 192
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 27.9 bits (59), Expect = 4.6
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -2
Query: 445 PRTPASPTMPMAKPAARPENPTAKPAPKWM 356
P PA P P AA NP A P P M
Sbjct: 727 PSAPAPPLPPPLPAAANKRNPPAPPPPPLM 756
>09_06_0081 + 20745627-20748144,20748211-20748308
Length = 871
Score = 27.9 bits (59), Expect = 4.6
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -2
Query: 451 AVPRTPASPTMPMAKPAARPENPTAKPA 368
A PR P P A PAA P P+ P+
Sbjct: 714 ATPRAPTPPAAAAAAPAAPPALPSGLPS 741
>05_04_0242 +
19336663-19336789,19337071-19337290,19337392-19337437,
19337559-19337675
Length = 169
Score = 27.9 bits (59), Expect = 4.6
Identities = 25/109 (22%), Positives = 46/109 (42%), Gaps = 1/109 (0%)
Frame = +3
Query: 102 PIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAI 281
PIY P G + +IF+ L G + S TG+ +S P +M + ++ + +
Sbjct: 54 PIYFPI-GNLATGFFVIFALLAGVVGVSTSLTGLHDVSQGYPASMMSAAAASIVTWTLTL 112
Query: 282 YGLVVAVLIAGALQEPANYPLYKGFIHLGAGLAVGFSG-LAAGFAIGIV 425
+ +A P + + F + AG + +G L AG + I+
Sbjct: 113 LAMGLACKEISIGWRPPSLRALETFTIILAGTQLLCAGSLHAGAHVAII 161
>01_06_0708 + 31363851-31364063,31364314-31364439,31364646-31365755
Length = 482
Score = 27.9 bits (59), Expect = 4.6
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -1
Query: 413 GETGSQTRESYSQTSTQVDEPFVKGVVGWLLEGTS 309
G G S+T VD+P VVGW GTS
Sbjct: 4 GGGGGSLPPFLSKTYEMVDDPSTDAVVGWTPAGTS 38
>12_01_0790 +
7216452-7216489,7216664-7216722,7217268-7218750,
7218828-7218892,7219023-7219080,7219152-7219262,
7219332-7219410,7219521-7219613,7219701-7219886
Length = 723
Score = 27.5 bits (58), Expect = 6.1
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = -2
Query: 445 PRTPASPTMP--MAKPAARPENPTAKPAPKWMNPL*RG*LAGSWRAP 311
PR P SP+ P +A+P P +P P +PL L S R P
Sbjct: 255 PRIPVSPSHPPVVARPRDSPIASPPRPEPPVASPLGPKPLVASSRGP 301
>10_08_0520 - 18495118-18498237
Length = 1039
Score = 27.5 bits (58), Expect = 6.1
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Frame = -2
Query: 445 PRTPASPTMPMAKPAARP---ENPTAKPAPKWMNPL*RG 338
P P P P A+P ARP + +KP P ++ L RG
Sbjct: 88 PAAPPPPPPPSAQPPARPARYDFLNSKPPPNYVAGLGRG 126
>03_05_1081 + 30235677-30236474
Length = 265
Score = 27.5 bits (58), Expect = 6.1
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = -2
Query: 451 AVPRTPASPTM--PMAKPAARPENPTAKPAP 365
A P P P M P+ P A+ +PTA P+P
Sbjct: 45 AYPAAPPPPVMGQPVPPPPAQLHDPTAPPSP 75
>01_06_0027 - 25742122-25742310,25742481-25742553,25743219-25744159
Length = 400
Score = 27.5 bits (58), Expect = 6.1
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -2
Query: 445 PRTPASPTMPMAKPAARPENPTAKPAP 365
P P +P+ +P PE P A P+P
Sbjct: 13 PPPPVPVRVPVPEPQPEPETPQASPSP 39
>01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647
Length = 252
Score = 27.5 bits (58), Expect = 6.1
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = -2
Query: 445 PRTPASPTMPMAKPAARPENPTAKPAPKWMNP 350
P+ P+ P KP +P+ P P PK P
Sbjct: 161 PKPKPKPSPPKPKPGPKPKPPKPGPKPKPPKP 192
>11_01_0066 - 536281-537196,537397-537452
Length = 323
Score = 27.1 bits (57), Expect = 8.1
Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = -2
Query: 445 PRTPASPTM--PMAKPAARPENPTAKPAPKWMNPL*RG*LAGSWRAPAIRTATTRP 284
P +P P++ P PA+ P TA P P P S P I TAT RP
Sbjct: 212 PASPPPPSIATPPPSPASPPPPSTATPPPPSPTPT---TTRASPTPPPIPTATVRP 264
>06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,
8057595-8058314,8058404-8058603,8058988-8059172,
8059287-8059354,8059432-8060246,8060502-8060599,
8060702-8060887,8061358-8061538,8061651-8061812,
8061894-8061937,8062059-8062115,8062409-8062505,
8062614-8062786,8062868-8063081,8063270-8063395,
8064072-8064188,8064459-8064566,8064729-8064898,
8065049-8065127,8065211-8065285,8065845-8065942,
8066030-8066137,8066238-8066295,8066527-8066631,
8067461-8069516,8069804-8070697,8070896-8071852,
8072022-8072075,8072157-8072222,8072294-8073472,
8073868-8075598,8075764-8075829,8076763-8077788,
8077893-8078041
Length = 4264
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = -1
Query: 425 HDAYGETGSQTRESYSQTSTQVDEPFVKGVVGWLLEGTSNQDSHDQTVDGNN 270
HD ET +++R S D+ K +VG N+D+ Q DG++
Sbjct: 3023 HDKTDETSNESRGDNPTHSCTNDDSHDKNLVGCSPSEDLNEDNSAQLADGDD 3074
>04_03_0831 -
20133298-20133401,20133500-20133586,20133984-20134092,
20134272-20134442,20136059-20136208,20136765-20136872,
20137725-20137780,20138061-20138124,20138198-20138209
Length = 286
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +3
Query: 114 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVM 263
P FGV + ++I +G+ Y +SG + A + L + PV++
Sbjct: 9 PTFGVGHSLGSVIHLLIGSRYAVQRSGNILMAFNNKEASLAVPLFSPVIV 58
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,003,169
Number of Sequences: 37544
Number of extensions: 380450
Number of successful extensions: 1648
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1637
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1011709100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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