Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0951
         (360 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0614 - 16206005-16206586,16207585-16207608,16209746-162098...    28   1.9  
04_04_0357 - 24663305-24663711,24664179-24664461                       27   5.9  
03_06_0186 - 32197461-32197751,32204940-32205548,32205603-32207009     27   5.9  
08_02_0308 + 15617044-15617173,15618342-15618757                       26   7.7  
03_01_0007 + 79202-79433,80426-80713,80790-80870,81090-81191,816...    26   7.7  

>05_03_0614 -
           16206005-16206586,16207585-16207608,16209746-16209879,
           16210703-16210832
          Length = 289

 Score = 28.3 bits (60), Expect = 1.9
 Identities = 18/64 (28%), Positives = 27/64 (42%)
 Frame = -2

Query: 230 TVKQKKGRSITLFSIAKVS*FKDLCRHYQISPSFFIHCLNNKSILYYEHCNHTSIKICNR 51
           T K+ +GR + L     +    DLC    +SP   + C +  S L    C+ TS     R
Sbjct: 120 TTKENEGREV-LVGANLLPNDDDLCPSTPLSPMSSVSCSSTASTLVTRSCSLTSTTFAPR 178

Query: 50  SSNF 39
           +  F
Sbjct: 179 ADIF 182


>04_04_0357 - 24663305-24663711,24664179-24664461
          Length = 229

 Score = 26.6 bits (56), Expect = 5.9
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -2

Query: 185 AKVS*FKDLCRHYQISPSFFIHC 117
           A+V+ +KD CR + +SP   ++C
Sbjct: 207 ARVNYYKDYCRQFGVSPGGNLYC 229


>03_06_0186 - 32197461-32197751,32204940-32205548,32205603-32207009
          Length = 768

 Score = 26.6 bits (56), Expect = 5.9
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -1

Query: 270 LARLGIVSNNQCIHCQAEEGTIHHIIFDCQ 181
           LA  G  +N +C  C+ E+ T  H+I +C+
Sbjct: 681 LATKGWQNNGRCPLCRREDETALHLIAECR 710


>08_02_0308 + 15617044-15617173,15618342-15618757
          Length = 181

 Score = 26.2 bits (55), Expect = 7.7
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 237 CIHCQAEEGTIHHIIF 190
           C HC+  EGT+ H++F
Sbjct: 96  CDHCKVAEGTMLHLLF 111


>03_01_0007 +
           79202-79433,80426-80713,80790-80870,81090-81191,
           81677-81813
          Length = 279

 Score = 26.2 bits (55), Expect = 7.7
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -2

Query: 98  LYYEHCNHTSIKICNRSSNFNIYGWSKNQLA 6
           L  ++CNH +  IC R +   I GW  N+LA
Sbjct: 142 LIAKNCNHFTADICKRLTGKPIPGW-VNRLA 171


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,767,044
Number of Sequences: 37544
Number of extensions: 157049
Number of successful extensions: 329
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 326
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 329
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 554421256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)