Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0951
         (360 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF100669-1|AAK39265.1|  931|Caenorhabditis elegans Hypothetical ...    30   0.56 
AF025467-3|AAB71035.2|  213|Caenorhabditis elegans Hypothetical ...    30   0.56 
AC006617-6|AAF39769.1|  303|Caenorhabditis elegans Hypothetical ...    28   1.7  
Z66567-2|CAA91488.1| 1118|Caenorhabditis elegans Hypothetical pr...    27   3.9  
Z48638-6|CAA88567.1|  541|Caenorhabditis elegans Hypothetical pr...    27   3.9  
AC087081-17|AAG37969.1|  235|Caenorhabditis elegans Hypothetical...    27   5.2  
Z82052-2|CAB04824.1|  318|Caenorhabditis elegans Hypothetical pr...    26   6.9  
Z74033-7|CAA98472.2|  325|Caenorhabditis elegans Hypothetical pr...    26   9.1  
AF098996-2|AAC68711.3|  431|Caenorhabditis elegans Hypothetical ...    26   9.1  
AC006717-1|AAY55883.2|  101|Caenorhabditis elegans Hypothetical ...    26   9.1  

>AF100669-1|AAK39265.1|  931|Caenorhabditis elegans Hypothetical
           protein R11E3.3 protein.
          Length = 931

 Score = 29.9 bits (64), Expect = 0.56
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -1

Query: 306 RLRFGHNT-APSHLARLGIVSNNQCIHCQAEEGTIHHII 193
           RLR GH+     + ARL      +C++C  EEG + H++
Sbjct: 856 RLRCGHSLLVEKYKARLEERQIKKCLNCGDEEGDVQHLL 894


>AF025467-3|AAB71035.2|  213|Caenorhabditis elegans Hypothetical
           protein R148.4 protein.
          Length = 213

 Score = 29.9 bits (64), Expect = 0.56
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = -3

Query: 202 SHYFRLPKFHNSKTCVGIIKFLPRFLYIASITRVSYIMSIVI 77
           S Y  LP F  ++ C GI++    +L + ++T +  I+ IVI
Sbjct: 8   SFYGALPSFKPTRHCCGIVENSVLYLLLTALTTLQLIVFIVI 49


>AC006617-6|AAF39769.1|  303|Caenorhabditis elegans Hypothetical
           protein C39B5.4 protein.
          Length = 303

 Score = 28.3 bits (60), Expect = 1.7
 Identities = 12/21 (57%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
 Frame = -2

Query: 80  NHTS-IKICNRSSNFNIYGWS 21
           NHTS ++ICN++ N +IYG S
Sbjct: 119 NHTSKLEICNKAHNSHIYGTS 139


>Z66567-2|CAA91488.1| 1118|Caenorhabditis elegans Hypothetical
           protein ZK455.2 protein.
          Length = 1118

 Score = 27.1 bits (57), Expect = 3.9
 Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
 Frame = -2

Query: 239 NVYTVKQKKGRSITLFSIAKVS*FKDLCRHYQ-ISPSFFIHCLNNKSILYYEHCNHTSIK 63
           NV ++  KK  S++ FS+  +    + C  Y  +  + F+H L N S+ +   CN+  + 
Sbjct: 90  NVRSLNLKK-TSLSNFSVFTM----ESCNKYSGVEHAAFLHYLKNASVYFGPGCNNEMLV 144

Query: 62  ICNRSSNFNI 33
           I   +  +N+
Sbjct: 145 IGRLAPRWNV 154


>Z48638-6|CAA88567.1|  541|Caenorhabditis elegans Hypothetical
           protein ZK892.3 protein.
          Length = 541

 Score = 27.1 bits (57), Expect = 3.9
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = -2

Query: 140 SPSFFIHCLNNKSILYYEHCNHTSIKICNRSSNFN 36
           S S F  C+N+K  LY+E   H   + C   ++++
Sbjct: 73  SKSQFDECVNDKKYLYFESAQHYYQQDCTSLTHYS 107


>AC087081-17|AAG37969.1|  235|Caenorhabditis elegans Hypothetical
           protein Y82E9BL.2 protein.
          Length = 235

 Score = 26.6 bits (56), Expect = 5.2
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -3

Query: 175 HNSKTCVGIIKFLPRFLYIASITRVSYIMSIVI 77
           H S+    I+KFLP  +Y+  I  +  I  +V+
Sbjct: 153 HPSQNEYNIVKFLPGTIYLCPIINIMVIPPVVV 185


>Z82052-2|CAB04824.1|  318|Caenorhabditis elegans Hypothetical
           protein T25E12.6 protein.
          Length = 318

 Score = 26.2 bits (55), Expect = 6.9
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -2

Query: 203 ITLFSIAKVS*FKDLCRHYQISPSFFIHCLNNKS 102
           +TL+SI +    K  C +Y+I   +F+   NNK+
Sbjct: 92  VTLYSILRQPGVKVDCFYYRILNQYFVRDKNNKT 125


>Z74033-7|CAA98472.2|  325|Caenorhabditis elegans Hypothetical
           protein F38B7.4 protein.
          Length = 325

 Score = 25.8 bits (54), Expect = 9.1
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = -2

Query: 137 PSFFIHCLNNKSILYYEHCNHTSIKICNRSSNFNIYGWSKNQ 12
           P F   C  N  IL +   N   + + N ++   I+ + KNQ
Sbjct: 179 PDFSPQCSGNSGILLFMAVNFAIVSVINVATFAKIFKFYKNQ 220


>AF098996-2|AAC68711.3|  431|Caenorhabditis elegans Hypothetical
           protein T11F1.6 protein.
          Length = 431

 Score = 25.8 bits (54), Expect = 9.1
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -3

Query: 148 IKFLPRFLYIASITRVSYIMSIVITLLLKSAIGPLILI 35
           + FL R +YIA +    Y++ I+    L  A  P+I +
Sbjct: 393 LNFLSRLMYIALLEENRYVIQIISNPFLYKARLPMISV 430


>AC006717-1|AAY55883.2|  101|Caenorhabditis elegans Hypothetical
           protein Y14H12A.2 protein.
          Length = 101

 Score = 25.8 bits (54), Expect = 9.1
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = -2

Query: 158 CRHYQISPSFFIHCLNNKSILYYEHCNHTSIKIC 57
           C H+   P   ++C++   + +   CN +S K C
Sbjct: 29  CGHFDDDPIILLNCVHLLVLHFVRICNISSFKSC 62


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,103,600
Number of Sequences: 27780
Number of extensions: 159314
Number of successful extensions: 353
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 353
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 492763868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)