Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0949
(591 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032626-1|CAA21538.1| 183|Caenorhabditis elegans Hypothetical ... 150 6e-37
Z30423-1|CAA83003.1| 1681|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z83113-2|CAB05544.1| 479|Caenorhabditis elegans Hypothetical pr... 29 2.5
AL023828-3|CAA19468.1| 572|Caenorhabditis elegans Hypothetical ... 29 2.5
AL023828-2|CAA19449.1| 570|Caenorhabditis elegans Hypothetical ... 29 2.5
Z78200-5|CAB01584.2| 512|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z77661-2|CAB01184.4| 265|Caenorhabditis elegans Hypothetical pr... 28 5.7
AL023828-4|CAA19469.1| 462|Caenorhabditis elegans Hypothetical ... 28 5.7
>AL032626-1|CAA21538.1| 183|Caenorhabditis elegans Hypothetical
protein Y37D8A.1 protein.
Length = 183
Score = 150 bits (364), Expect = 6e-37
Identities = 75/146 (51%), Positives = 101/146 (69%), Gaps = 5/146 (3%)
Frame = +3
Query: 168 MPAYHSTLTDYSQTVG----NLAILPLRTSFRGPAPTSSDIELDIIDEALNYFKANVFFR 335
MPAYHS + + N+ LP+RT+F+GPAP ++ + DIIDEAL YFK N+FFR
Sbjct: 1 MPAYHSKFDTELKVLPLGNTNMGKLPIRTNFKGPAPQTN--QDDIIDEALTYFKPNIFFR 58
Query: 336 FYEIKSDADRVLIYLTLYVSECLKRLQKCSSKNQGQQEMYMLAISK-FDIPGEPGFPLNS 512
+EIK ADR +IYL Y++ECL++LQK +K GQ++++ LA+S IPGE GFPLNS
Sbjct: 59 EFEIKGPADRTMIYLIFYITECLRKLQKSPNKIAGQKDLHALALSHLLPIPGENGFPLNS 118
Query: 513 VYARPTSQQESDLMRQYLQQLRHETG 590
+Y P S+ + D MR YLQQ+R E G
Sbjct: 119 MYKAPQSKPDEDEMRAYLQQIRQEIG 144
>Z30423-1|CAA83003.1| 1681|Caenorhabditis elegans Hypothetical protein
T20G5.1 protein.
Length = 1681
Score = 29.9 bits (64), Expect = 1.4
Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 8/101 (7%)
Frame = +3
Query: 309 YFKANVFFRFYEIKSDADRVLIYLTLYVSECLKRLQKCS--------SKNQGQQEMYMLA 464
Y +A F+ +++ S A VLI + + +KC+ +K Q QQ + A
Sbjct: 1067 YEEAFAIFKKFDVNSSAINVLIENVNNLDRAYEFAEKCNQSDVWASLAKAQLQQNLVKEA 1126
Query: 465 ISKFDIPGEPGFPLNSVYARPTSQQESDLMRQYLQQLRHET 587
+ F +PG + V ++ DL+R YLQ R ++
Sbjct: 1127 VDSFIKADDPGAYMEVVNKCSQTEHWEDLVR-YLQMARKKS 1166
>Z83113-2|CAB05544.1| 479|Caenorhabditis elegans Hypothetical
protein K08H10.4 protein.
Length = 479
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 182 FNVN*LQSNSWESCNLTTSNFVQRPRPNELR 274
+N+N S+S+ESC TT NFV+ LR
Sbjct: 297 WNINGSSSHSFESCYGTTKNFVESSEIMHLR 327
>AL023828-3|CAA19468.1| 572|Caenorhabditis elegans Hypothetical
protein Y17G7B.2b protein.
Length = 572
Score = 29.1 bits (62), Expect = 2.5
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +3
Query: 177 YHSTLTDYSQTVGNLAILPLRTSFRGPAPTSSDIELDIIDEALNY--FKANVFFRFYEIK 350
YH +G L LP+ + PA S+ L + + N FKAN FF E
Sbjct: 396 YHFGGFKQGDVLGCLIHLPVDKKLQIPANLPSEKYLPVSHKGFNLISFKANYFFEVQEES 455
Query: 351 SDADRVLI 374
+D + L+
Sbjct: 456 ADIAKTLV 463
>AL023828-2|CAA19449.1| 570|Caenorhabditis elegans Hypothetical
protein Y17G7B.2a protein.
Length = 570
Score = 29.1 bits (62), Expect = 2.5
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +3
Query: 177 YHSTLTDYSQTVGNLAILPLRTSFRGPAPTSSDIELDIIDEALNY--FKANVFFRFYEIK 350
YH +G L LP+ + PA S+ L + + N FKAN FF E
Sbjct: 394 YHFGGFKQGDVLGCLIHLPVDKKLQIPANLPSEKYLPVSHKGFNLISFKANYFFEVQEES 453
Query: 351 SDADRVLI 374
+D + L+
Sbjct: 454 ADIAKTLV 461
>Z78200-5|CAB01584.2| 512|Caenorhabditis elegans Hypothetical
protein T04H1.7 protein.
Length = 512
Score = 27.9 bits (59), Expect = 5.7
Identities = 13/52 (25%), Positives = 27/52 (51%)
Frame = +3
Query: 225 ILPLRTSFRGPAPTSSDIELDIIDEALNYFKANVFFRFYEIKSDADRVLIYL 380
+L L ++ + TS ++ LD ++ + + F FY +D++L+YL
Sbjct: 440 LLKLSSNLKNAKQTSENLFLDTVESTYTDNLSPLNFEFYPKLYSSDQILLYL 491
>Z77661-2|CAB01184.4| 265|Caenorhabditis elegans Hypothetical
protein F40G12.2 protein.
Length = 265
Score = 27.9 bits (59), Expect = 5.7
Identities = 13/54 (24%), Positives = 27/54 (50%)
Frame = +3
Query: 294 DEALNYFKANVFFRFYEIKSDADRVLIYLTLYVSECLKRLQKCSSKNQGQQEMY 455
++ LN+ ANV + + DA+ ++ + +CL+ +KC K + + Y
Sbjct: 54 EDPLNHQNANVNMSPWGLPYDAECGMVPMVFLEMDCLEPAKKCRQKIENFENKY 107
>AL023828-4|CAA19469.1| 462|Caenorhabditis elegans Hypothetical
protein Y17G7B.2c protein.
Length = 462
Score = 27.9 bits (59), Expect = 5.7
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +3
Query: 210 VGNLAILPLRTSFRGPAPTSSDIELDIIDEALNY--FKANVFFRFYEIKSDADRVLI 374
+G L LP+ + PA S+ L + + N FKAN FF E +D + L+
Sbjct: 297 LGCLIHLPVDKKLQIPANLPSEKYLPVSHKGFNLISFKANYFFEVQEESADIAKTLV 353
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,570,256
Number of Sequences: 27780
Number of extensions: 212589
Number of successful extensions: 622
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 620
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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