Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0948
(351 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0502 + 18826595-18826660,18826815-18826885,18828963-188290... 29 1.0
07_01_0503 - 3751028-3751063,3751145-3751231,3751333-3751410,375... 29 1.4
09_02_0243 - 6192324-6192443,6193246-6193374,6193528-6193695,619... 28 2.4
06_03_0855 + 25408783-25409397 28 2.4
05_05_0368 + 24449793-24451199,24451867-24451927,24452256-24452710 28 2.4
10_08_0105 - 14828097-14828226,14828371-14828547,14829690-148297... 27 4.1
08_02_0207 - 14312457-14312489,14312724-14312795,14313092-14313259 27 4.1
03_01_0414 + 3183292-3183735,3184547-3184969,3185435-3185535,318... 27 4.1
01_01_0152 + 1349820-1350107 27 4.1
03_05_0896 - 28592658-28593331,28594069-28595455 27 5.5
06_03_0384 + 20174441-20175788,20176215-20176858 26 7.2
04_04_1281 - 32370253-32370519,32371046-32371190,32371546-32371778 26 7.2
04_04_1278 - 32336009-32336269 26 7.2
01_05_0415 - 21940466-21941536 26 7.2
04_04_1115 + 31008213-31008707,31009385-31009689,31010848-310111... 26 9.6
>07_03_0502 +
18826595-18826660,18826815-18826885,18828963-18829056,
18829575-18831521
Length = 725
Score = 29.1 bits (62), Expect = 1.0
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Frame = -3
Query: 307 IEYSSQASFEEGQ--VTALGKHHGGELIP*PD--GTWQKKTSGNALWMTAMAPGSMDELY 140
I+ +A F +G+ V+ LG G +P P W+K G WM GS D Y
Sbjct: 530 IKQFPRADFAKGKFVVSNLGCMKGTSQVPDPKVLNHWEKPNPG---WMKLNVDGSFDARY 586
Query: 139 SGGG 128
GG
Sbjct: 587 GSGG 590
>07_01_0503 -
3751028-3751063,3751145-3751231,3751333-3751410,
3751488-3751583,3752124-3752210,3752289-3752357,
3752511-3752600,3752601-3752720,3752907-3753004,
3753084-3753193,3753463-3753533,3753679-3753714,
3753862-3753973,3754495-3754700
Length = 431
Score = 28.7 bits (61), Expect = 1.4
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +3
Query: 180 HSAFPEVFFCHVP 218
HS PE FFCHVP
Sbjct: 196 HSQSPEAFFCHVP 208
>09_02_0243 -
6192324-6192443,6193246-6193374,6193528-6193695,
6193833-6194023,6194137-6194281,6195307-6195462
Length = 302
Score = 27.9 bits (59), Expect = 2.4
Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = +1
Query: 151 PYYL-EPLRSSTVRFQRFFFATYHP 222
PY L +PLR ST FQRF F++ P
Sbjct: 54 PYMLNQPLRYSTTIFQRFGFSSTSP 78
>06_03_0855 + 25408783-25409397
Length = 204
Score = 27.9 bits (59), Expect = 2.4
Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 12/58 (20%)
Frame = +3
Query: 87 SYRSGPSWFLLSHRPPPE*SSS------ILPGAIA---VIHSAF---PEVFFCHVPSG 224
SY +GPS L PPP +S I PG + +H A P +FF VP G
Sbjct: 36 SYTAGPSHALPPPPPPPPAASDSFFQVVIPPGGVPTNYAVHEALDFDPNIFFADVPDG 93
>05_05_0368 + 24449793-24451199,24451867-24451927,24452256-24452710
Length = 640
Score = 27.9 bits (59), Expect = 2.4
Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = -1
Query: 264 QRSGNTMEGSSFRSRMVRGKKKPLETHCG*PQWLQ-VVWMNSTPEAGG 124
+R+ + +G SF R + G +P G QW Q V W GG
Sbjct: 518 RRARSPCDGGSFGWRSIGGAARPATAKPGTAQWRQCVAWWRRCMAGGG 565
>10_08_0105 -
14828097-14828226,14828371-14828547,14829690-14829739,
14829841-14829909,14829976-14830074,14830148-14830226,
14830587-14830687,14830794-14830862,14831019-14831059,
14831313-14831663,14831676-14832511,14832674-14832777,
14833587-14834003,14836108-14836491
Length = 968
Score = 27.1 bits (57), Expect = 4.1
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = +3
Query: 237 SPPWCFPSAVTCPSSNEACEEYSM*AAAW 323
+P W P + SNE C+ YS W
Sbjct: 850 TPEWMAPEVLRNEQSNEKCDVYSFGVILW 878
>08_02_0207 - 14312457-14312489,14312724-14312795,14313092-14313259
Length = 90
Score = 27.1 bits (57), Expect = 4.1
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = -1
Query: 327 RAKPLPTLSTLHKPRLKKDKSQRSG--NTMEGSSFRSRMVRGKK 202
RA P PT+S LH+ R + + R G G++F G K
Sbjct: 19 RASPPPTMSELHEQRQRPTHAARIGGEGQQPGAAFIDAEANGSK 62
>03_01_0414 +
3183292-3183735,3184547-3184969,3185435-3185535,
3186178-3187439,3187625-3187665,3187777-3187845,
3187975-3188075,3188413-3188491,3188570-3188668,
3188757-3188825,3188918-3188967,3189211-3189387,
3189496-3189634
Length = 1017
Score = 27.1 bits (57), Expect = 4.1
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = +3
Query: 237 SPPWCFPSAVTCPSSNEACEEYSM*AAAW 323
+P W P + SNE C+ YS W
Sbjct: 896 TPEWMAPEVLRNEQSNEKCDVYSFGVILW 924
>01_01_0152 + 1349820-1350107
Length = 95
Score = 27.1 bits (57), Expect = 4.1
Identities = 17/60 (28%), Positives = 22/60 (36%)
Frame = -3
Query: 280 EEGQVTALGKHHGGELIP*PDGTWQKKTSGNALWMTAMAPGSMDELYSGGGRCDSKNQLG 101
E G V G H E W+ + + A W G+M+ GGG C Q G
Sbjct: 18 ERGAVEDSGGRHAVEAEAAAAARWRAEAAAAARWRAEAGHGAME----GGGGCSDAVQAG 73
>03_05_0896 - 28592658-28593331,28594069-28595455
Length = 686
Score = 26.6 bits (56), Expect = 5.5
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +2
Query: 131 ASGVEFIHTTWSHCGHPQCVSRGFFLPRTIRLR---NELPSMVFP 256
A GVE+IH+T S H S L ++ + R N L ++V P
Sbjct: 485 ARGVEYIHSTSSSASHGNIKSSNVLLNKSYQARLSDNGLSALVGP 529
>06_03_0384 + 20174441-20175788,20176215-20176858
Length = 663
Score = 26.2 bits (55), Expect = 7.2
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 131 ASGVEFIHTTWSHCGHPQCVSRGFFLPRTIRLRNEL 238
A G+ F+H W+ G P V G +P I L +L
Sbjct: 511 ARGLAFLHQGWAGSGRP--VVHGHLVPTNILLGEDL 544
>04_04_1281 - 32370253-32370519,32371046-32371190,32371546-32371778
Length = 214
Score = 26.2 bits (55), Expect = 7.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 196 SGNALWMTAMAPGSMDELYSGGGRC 122
+ A WM AM+ G+++ L GG C
Sbjct: 4 AAKASWMVAMSVGAVEALKDQGGLC 28
>04_04_1278 - 32336009-32336269
Length = 86
Score = 26.2 bits (55), Expect = 7.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 196 SGNALWMTAMAPGSMDELYSGGGRC 122
+ A WM AM+ G+++ L GG C
Sbjct: 4 AAKASWMVAMSVGAVEALKDQGGLC 28
>01_05_0415 - 21940466-21941536
Length = 356
Score = 26.2 bits (55), Expect = 7.2
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = -1
Query: 318 PLPTLSTLHKPRLKKDKSQRSGNTMEGSSFRSRMVRGKKKPLETHC 181
P P L +H P + +D+S+ S T S + + K KP C
Sbjct: 134 PEPEL-VVHPPTMAQDESKPSSTTSSSSGTTTTTTKKKNKPRCAAC 178
>04_04_1115 +
31008213-31008707,31009385-31009689,31010848-31011108,
31011193-31011401,31011490-31011783,31011861-31011901,
31011987-31012055,31012164-31012264,31012351-31012435,
31012539-31012637,31012731-31012799,31012909-31013040,
31013128-31013222,31013340-31013421
Length = 778
Score = 25.8 bits (54), Expect = 9.6
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = +3
Query: 237 SPPWCFPSAVTCPSSNEACEEYSM*AAAW 323
+P W P + SNE C+ YS W
Sbjct: 676 TPEWMAPEFLRGEPSNEKCDVYSFGVILW 704
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,509,642
Number of Sequences: 37544
Number of extensions: 231246
Number of successful extensions: 655
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 655
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 518263348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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