Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0948
         (351 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81055-4|CAB02893.1|  824|Caenorhabditis elegans Hypothetical pr...    29   1.2  
Z81070-1|CAB02997.1|  137|Caenorhabditis elegans Hypothetical pr...    27   5.0  
AF026214-7|AAP68943.1|  640|Caenorhabditis elegans Hypothetical ...    26   6.6  
Z37093-5|CAJ85782.1|  212|Caenorhabditis elegans Hypothetical pr...    26   8.7  
U41545-7|AAK39136.1|  687|Caenorhabditis elegans Hypothetical pr...    26   8.7  

>Z81055-4|CAB02893.1|  824|Caenorhabditis elegans Hypothetical
           protein F01G10.5 protein.
          Length = 824

 Score = 28.7 bits (61), Expect = 1.2
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = -1

Query: 336 ARDRAKPLPTLSTLHKPRLKKDKSQRSGNTMEGSSFRSRMVRGKKKPL 193
           ++DR K L + +   KP LK   +   GN    S+    + +GK K +
Sbjct: 756 SKDRVKTLTSRNEKVKPHLKSSYATEMGNVTSPSADEENVRKGKSKSI 803


>Z81070-1|CAB02997.1|  137|Caenorhabditis elegans Hypothetical
           protein F26E4.2 protein.
          Length = 137

 Score = 26.6 bits (56), Expect = 5.0
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -3

Query: 220 DGTWQKKTSGNALWMTAMAPGSMDE 146
           DG  +K+   NALW TA+  G  +E
Sbjct: 51  DGVVEKQHESNALWTTAITRGVANE 75


>AF026214-7|AAP68943.1|  640|Caenorhabditis elegans Hypothetical
           protein F52H2.1 protein.
          Length = 640

 Score = 26.2 bits (55), Expect = 6.6
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -1

Query: 174 PQWLQVVWMNSTPEAG 127
           P +LQ +W+N+ PE+G
Sbjct: 499 PSFLQQLWLNANPESG 514


>Z37093-5|CAJ85782.1|  212|Caenorhabditis elegans Hypothetical
           protein ZK669.5a protein.
          Length = 212

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -1

Query: 321 KPLPTLSTLHKPRLKKDK 268
           +P+PT +T   P LKKDK
Sbjct: 191 EPVPTATTTSAPALKKDK 208


>U41545-7|AAK39136.1|  687|Caenorhabditis elegans Hypothetical
           protein C02F12.8 protein.
          Length = 687

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 6/48 (12%)
 Frame = +3

Query: 162 GAIAVIHSAF----PEVFFCHVPSGYGMSSPPWCFP--SAVTCPSSNE 287
           GA+ V   ++    P++     PSGYG SSP +  P  S  + P +NE
Sbjct: 197 GAVMVSQGSYSMSPPQIDTSKPPSGYGFSSPIFPSPSYSQYSGPPANE 244


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,186,794
Number of Sequences: 27780
Number of extensions: 171757
Number of successful extensions: 505
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 502
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 472561672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)