Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0948
         (351 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    30   0.007
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   5.6  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              20   7.4  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    20   9.8  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       20   9.8  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    20   9.8  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 30.3 bits (65), Expect = 0.007
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +3

Query: 198 VFFCHVPSGYGMSSPPWCFPSAVTCPSSNEA 290
           V+ C+V  G G+S   W +P+++T P SN A
Sbjct: 533 VYACNVV-GSGLSHGNWIYPASMTIPGSNSA 562


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +2

Query: 158 TWSHCGHPQCVS 193
           TW+ CG P+ V+
Sbjct: 522 TWTFCGTPEYVA 533


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -3

Query: 127  RCDSKNQLGPDR*LSSRAQPERIC*Y 50
            RC    ++G    LS R   + IC Y
Sbjct: 1700 RCPPPPRMGSAEGLSHRGMEDEICPY 1725


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = -2

Query: 269 SHSARETPWRGAHSVAGWYVAKKNLWKR 186
           S     TP++   SV+  + +  N W R
Sbjct: 412 SRDPARTPFQWDDSVSAGFSSSSNTWLR 439


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 12/44 (27%), Positives = 19/44 (43%)
 Frame = +3

Query: 114 LLSHRPPPE*SSSILPGAIAVIHSAFPEVFFCHVPSGYGMSSPP 245
           L+S  PP    S + P +++ + SA        +P   G   PP
Sbjct: 376 LMSQPPPNFGVSQVSPVSMSALVSAVRSPAGGQLPPSAGAPMPP 419


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = -2

Query: 269 SHSARETPWRGAHSVAGWYVAKKNLWKR 186
           S     TP++   SV+  + +  N W R
Sbjct: 412 SRDPARTPFQWDDSVSAGFSSSSNTWLR 439


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,170
Number of Sequences: 438
Number of extensions: 2275
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8060325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)