Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0948
(351 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g71220.1 68414.m08219 UDP-glucose:glycoprotein glucosyltransf... 30 0.50
At1g12040.1 68414.m01390 leucine-rich repeat family protein / ex... 29 0.66
At4g23050.2 68417.m03324 protein kinase, putative similar to MAP... 29 1.2
At4g23050.1 68417.m03323 protein kinase, putative similar to MAP... 29 1.2
At4g12750.1 68417.m02002 expressed protein 29 1.2
At3g58970.1 68416.m06572 magnesium transporter CorA-like family ... 29 1.2
At3g55550.1 68416.m06168 lectin protein kinase, putative similar... 29 1.2
At3g13450.1 68416.m01692 2-oxoisovalerate dehydrogenase / 3-meth... 29 1.2
At1g55510.1 68414.m06350 2-oxoisovalerate dehydrogenase, putativ... 29 1.2
At4g25710.1 68417.m03701 kelch repeat-containing F-box family pr... 28 1.5
At5g67160.1 68418.m08466 transferase family protein similar to a... 28 2.0
At5g39280.1 68418.m04757 expansin, putative (EXP23) similar to e... 28 2.0
At3g07100.1 68416.m00845 protein transport protein Sec24, putati... 27 2.7
At3g54580.1 68416.m06039 proline-rich extensin-like family prote... 27 3.5
At1g65890.1 68414.m07477 acyl-activating enzyme 12 (AAE12) simil... 27 3.5
At1g47128.1 68414.m05222 cysteine proteinase (RD21A) / thiol pro... 27 3.5
At1g18840.1 68414.m02346 calmodulin-binding family protein low s... 27 4.6
At1g08720.1 68414.m00968 mitogen-activated protein kinase kinase... 27 4.6
At5g39300.1 68418.m04759 expansin, putative (EXP25) similar to a... 26 6.1
At1g53440.1 68414.m06057 leucine-rich repeat family protein / pr... 26 6.1
At5g58040.1 68418.m07263 fip1 motif-containing protein contains ... 26 8.1
At5g53980.1 68418.m06715 homeobox-leucine zipper family protein ... 26 8.1
At2g41900.1 68415.m05183 zinc finger (CCCH-type) family protein ... 26 8.1
>At1g71220.1 68414.m08219 UDP-glucose:glycoprotein
glucosyltransferase, putative similar to
UDP-glucose:glycoprotein glucosyltransferase precursor
GB:Q09332 [SP|Q09332] from Drosophila melanogaster,
[gi:7670746] and [gi:11346464] from Homo sapiens
Length = 1673
Score = 29.9 bits (64), Expect = 0.50
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -3
Query: 217 GTWQKKTSGNALWMTAMAPGSMDELYS-GGGRCDSKNQ 107
G WQ K S +W +APG ELY+ GG S++Q
Sbjct: 1221 GYWQMKVSPG-VWYLQLAPGRSSELYALKGGNDGSQDQ 1257
>At1g12040.1 68414.m01390 leucine-rich repeat family protein /
extensin family protein (LRX1) similar to extensin-like
protein [Lycopersicon esculentum]
gi|5917664|gb|AAD55979; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 744
Score = 29.5 bits (63), Expect = 0.66
Identities = 23/66 (34%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Frame = +3
Query: 90 YRSGPSWFLLSHRPPPE*SSSILPGAIAVIHSAFPEVFFCHVPSGYGMSSPPWCFPS-AV 266
Y S P ++ S PPP S P V S P + P Y SSPP PS
Sbjct: 472 YSSPPPPYVYSSPPPPPYVYSSPPPPPYVYSSPPPPYVYSSPPPPYVYSSPPPPPPSPPP 531
Query: 267 TCPSSN 284
CP S+
Sbjct: 532 PCPESS 537
>At4g23050.2 68417.m03324 protein kinase, putative similar to MAP3K
delta-1 protein kinase [Arabidopsis thaliana]
gi|2253010|emb|CAA74591; contains Pfam PF00069 Protein
kinase domain and PF00989 PAS domain
Length = 736
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 5/41 (12%)
Frame = +3
Query: 228 GMSSPPWCFPSAVTCPSSNEACEEYSM*AAAW-----LCPW 335
G +P W P + SNE C+ +S W L PW
Sbjct: 626 GKGTPQWMAPEVLRSEPSNEKCDVFSFGVILWELMTTLVPW 666
>At4g23050.1 68417.m03323 protein kinase, putative similar to MAP3K
delta-1 protein kinase [Arabidopsis thaliana]
gi|2253010|emb|CAA74591; contains Pfam PF00069 Protein
kinase domain and PF00989 PAS domain
Length = 735
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 5/41 (12%)
Frame = +3
Query: 228 GMSSPPWCFPSAVTCPSSNEACEEYSM*AAAW-----LCPW 335
G +P W P + SNE C+ +S W L PW
Sbjct: 625 GKGTPQWMAPEVLRSEPSNEKCDVFSFGVILWELMTTLVPW 665
>At4g12750.1 68417.m02002 expressed protein
Length = 1108
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 170 CGHPQCVSRGFFLPRTIRLRNELPSMVFPE 259
C HP S G FL + I +R+ S++FP+
Sbjct: 285 CHHPSSGSHGCFLCKGIAMRSSDSSLLFPD 314
>At3g58970.1 68416.m06572 magnesium transporter CorA-like family
protein contains Pfam profile PF01544: CorA-like Mg2+
transporter protein
Length = 436
Score = 28.7 bits (61), Expect = 1.2
Identities = 19/66 (28%), Positives = 29/66 (43%)
Frame = -3
Query: 346 LQQCQGQSQAAAYIEYSSQASFEEGQVTALGKHHGGELIP*PDGTWQKKTSGNALWMTAM 167
L + + + +A + S+Q S L H GG + G +KKT G LWM
Sbjct: 11 LSSIRHRKKGSAVKDDSAQTSTPSSPPPPLPIHAGGSAVG-ATGKAKKKTGGARLWMRFD 69
Query: 166 APGSMD 149
G+M+
Sbjct: 70 RTGAME 75
>At3g55550.1 68416.m06168 lectin protein kinase, putative similar to
receptor lectin kinase 3 [Arabidopsis thaliana]
gi|4100060|gb|AAD00733; contains protein kinase domain,
Pfam:PF00069; contains legume lectins alpha and beta
domains, Pfam:PF00138 and Pfam:PF00139
Length = 684
Score = 28.7 bits (61), Expect = 1.2
Identities = 20/59 (33%), Positives = 27/59 (45%)
Frame = +1
Query: 34 ALARASISKFSQVEPVSSVTGRGLAGFYYRTARLRSRVHPYYLEPLRSSTVRFQRFFFA 210
AL+ ++ + V ++ G GLA T LR + YL L SS V F FFA
Sbjct: 81 ALSFSTSFAIAMVPEFVTLGGHGLAFAITPTPDLRGSLPSQYLGLLNSSRVNFSSHFFA 139
>At3g13450.1 68416.m01692 2-oxoisovalerate dehydrogenase /
3-methyl-2-oxobutanoate dehydrogenase / branched-chain
alpha-keto acid dehydrogenase E1 beta subunit (DIN4)
identical to branched chain alpha-keto acid
dehydrogenase E1 beta subunit [Arabidopsis thaliana]
GI:7021286
Length = 358
Score = 28.7 bits (61), Expect = 1.2
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +3
Query: 180 HSAFPEVFFCHVP 218
HS PE FFCHVP
Sbjct: 163 HSQSPEAFFCHVP 175
>At1g55510.1 68414.m06350 2-oxoisovalerate dehydrogenase, putative /
3-methyl-2-oxobutanoate dehydrogenase, putative /
branched-chain alpha-keto acid dehydrogenase E1 beta
subunit, putative strong similarity to branched chain
alpha-keto acid dehydrogenase E1 beta subunit
[Arabidopsis thaliana] GI:7021286; contains Pfam
profiles PF02779: Transketolase, pyridine binding
domain, PF02780: Transketolase, C-terminal domain
Length = 352
Score = 28.7 bits (61), Expect = 1.2
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +3
Query: 180 HSAFPEVFFCHVP 218
HS PE FFCHVP
Sbjct: 157 HSQSPEAFFCHVP 169
>At4g25710.1 68417.m03701 kelch repeat-containing F-box family
protein similar to SKP1 interacting partner 6
[Arabidopsis thaliana] GI:10716957; contains Pfam
profiles PF01344: Kelch motif, PF00646: F-box domain
Length = 390
Score = 28.3 bits (60), Expect = 1.5
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3
Query: 87 SYRSGPSWFLLSHRPPPE*SSS 152
SY++GPSWF L +P +SS
Sbjct: 88 SYKNGPSWFTLCRKPDRTTTSS 109
>At5g67160.1 68418.m08466 transferase family protein similar to
anthranilate N-hydroxycinnamoyl/benzoyltransferase,
Dianthus caryophyllus [gi:2239091]; contains Pfam
transferase family domain PF002458
Length = 434
Score = 27.9 bits (59), Expect = 2.0
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 202 FFATYHPATE*APLHGVSRAL*LV 273
FFA++ PAT HGVSR+L +V
Sbjct: 120 FFASFFPATGIKNYHGVSRSLLMV 143
>At5g39280.1 68418.m04757 expansin, putative (EXP23) similar to
expansin2 GI:4884433 from [Lycopersicon esculentum];
alpha-expansin gene family, PMID:11641069
Length = 259
Score = 27.9 bits (59), Expect = 2.0
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = +3
Query: 231 MSSPPWCFPSAVTCPSSNEACEEYSM*AAAWLCP 332
++ P WC P +V ++N +YS W P
Sbjct: 96 VNDPQWCLPGSVKITATNFCPPDYSKTEGVWCNP 129
>At3g07100.1 68416.m00845 protein transport protein Sec24, putative
similar to protein transport protein Sec24A
(SEC24-related protein) [Homo sapiens] SWISS-PROT:O95486
Length = 1038
Score = 27.5 bits (58), Expect = 2.7
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +3
Query: 129 PPPE*SSSILPGAIAVIHSAFPEVFFCHVPS--GYGMSSPP 245
PPP+ ++S LPGA +A+P H+P+ G+ S PP
Sbjct: 157 PPPQSTTSGLPGA-----NAYPPATDYHMPARPGFQQSMPP 192
>At3g54580.1 68416.m06039 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 951
Score = 27.1 bits (57), Expect = 3.5
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = +3
Query: 90 YRSGPSWFLLSHRPPPE*SSS---ILPGAIAVIHSAFPEVFFCHVPSGYGMSSPP 245
Y+S P ++ S PPP S S +S P+V++ P Y SSPP
Sbjct: 518 YKSPPPPYVYSSPPPPYYSPSPKVYYKSPPPPYYSPSPKVYYKSPPPPYVYSSPP 572
>At1g65890.1 68414.m07477 acyl-activating enzyme 12 (AAE12) similar
to AMP-binding protein GI:1903034 from [Brassica napus];
contains Pfam AMP-binding domain PF00501; identical to
cDNA acyl-activating enzyme 12 (At1g65890) mRNA
GI:29893228, acyl-activating enzyme 12 [Arabidopsis
thaliana] GI:29893229
Length = 578
Score = 27.1 bits (57), Expect = 3.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 60 ILSG*ARELSYRSGPSWFLLSHRPPP 137
+L G + +LS+RSGP L PPP
Sbjct: 288 LLKGNSLDLSHRSGPVHVLTGGSPPP 313
>At1g47128.1 68414.m05222 cysteine proteinase (RD21A) / thiol
protease identical to SP|P43297 Cysteine proteinase
RD21A precursor (EC 3.4.22.-) {Arabidopsis thaliana},
thiol protease RD21A SP:P43297 from [Arabidopsis
thaliana]
Length = 462
Score = 27.1 bits (57), Expect = 3.5
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Frame = +3
Query: 216 PSGYGMSSPPWCFPSAVTCPSSNEAC--EEYSM*AAAWLC 329
PS PP S TCP SN C EY AW C
Sbjct: 363 PSPPSPIKPPTQCDSYYTCPESNTCCCLFEYGKYCFAWGC 402
>At1g18840.1 68414.m02346 calmodulin-binding family protein low
similarity to SF16 protein [Helianthus annuus]
GI:560150; contains Pfam profile PF00612: IQ
calmodulin-binding motif
Length = 572
Score = 26.6 bits (56), Expect = 4.6
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -1
Query: 300 TLHKPRLK-KDKSQRSGNTMEGSSFRSRMVRGKKKPLE 190
T H P+ + + S +SGN E + SR GK P+E
Sbjct: 532 TSHSPKTRVSNSSGKSGNKTEKTLLSSREGNGKATPVE 569
>At1g08720.1 68414.m00968 mitogen-activated protein kinase kinase
kinase (MAPKKK) (EDR1) identical to EDR1, a MAP kinase
kinase kinase [Arabidopsis thaliana]
gi|11127925|gb|AAG31143
Length = 933
Score = 26.6 bits (56), Expect = 4.6
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = +3
Query: 237 SPPWCFPSAVTCPSSNEACEEYSM*AAAW 323
+P W P + SNE C+ YS W
Sbjct: 830 TPEWMAPEVLRNEPSNEKCDVYSFGVILW 858
>At5g39300.1 68418.m04759 expansin, putative (EXP25) similar to
alpha-expansin 4 precursor GI:16923355 from [Cucumis
sativus]; alpha-expansin gene family, PMID:11641069
Length = 260
Score = 26.2 bits (55), Expect = 6.1
Identities = 9/31 (29%), Positives = 13/31 (41%)
Frame = +3
Query: 240 PPWCFPSAVTCPSSNEACEEYSM*AAAWLCP 332
P WC P + ++N +YS W P
Sbjct: 100 PQWCLPGTIKITATNFCPPDYSKTEGVWCNP 130
>At1g53440.1 68414.m06057 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 1035
Score = 26.2 bits (55), Expect = 6.1
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 115 YYRTARLRSRVHPYYLEPLRSSTVRFQRFF 204
YY+TARL S+ YY +R + + Q +F
Sbjct: 475 YYKTARLASQSLKYYGLCMRRGSYKVQLYF 504
>At5g58040.1 68418.m07263 fip1 motif-containing protein contains
Pfam profile PF05182: Fip1 motif
Length = 1192
Score = 25.8 bits (54), Expect = 8.1
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -1
Query: 330 DRAKPLPTLSTLHKPRLKKDKSQRSGNTMEGSSFRS 223
+ A+ P HK LKK + S +T G SFRS
Sbjct: 519 ESAEHSPAQDEPHKNLLKKQDDEISRSTDSGQSFRS 554
>At5g53980.1 68418.m06715 homeobox-leucine zipper family protein
contains Pfam PF00046: Homeobox domain; similar to
homeobox protein PpHB5 (GI:7415622) [Physcomitrella
patens]
Length = 156
Score = 25.8 bits (54), Expect = 8.1
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 189 FPEVFFCHVPSGYGMSSPPW 248
F E++ C V +G+G SS W
Sbjct: 136 FDELYACFVSNGHGSSSTSW 155
>At2g41900.1 68415.m05183 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar) and Pfam domain,
PF00023: Ankyrin repeat
Length = 716
Score = 25.8 bits (54), Expect = 8.1
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = -3
Query: 166 APGSMDE-LYSGGGRCDSKNQLGPDR*LSSR 77
+P S+D L+SGGGR +N + P +S+R
Sbjct: 541 SPKSVDHSLFSGGGRMSPRNVVEPISPMSAR 571
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,834,122
Number of Sequences: 28952
Number of extensions: 163869
Number of successful extensions: 664
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 649
length of database: 12,070,560
effective HSP length: 72
effective length of database: 9,986,016
effective search space used: 439384704
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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