Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0946
         (410 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    22   2.7  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    22   2.7  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   4.7  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   6.2  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           20   8.2  

>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = +1

Query: 313 VNPENNFLPGGPVINAGMXXXXXXXXXPLF 402
           VNP  N + GG V + G          PLF
Sbjct: 57  VNPTANHVMGGAVPDVGKRDKDAIYGHPLF 86


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +1

Query: 292 ANNLPPGVNPENNFLPG 342
           +N+L  G NP++   PG
Sbjct: 3   SNSLTAGCNPDSELFPG 19


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.0 bits (42), Expect = 4.7
 Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
 Frame = -2

Query: 133 LSLLVNNPLVINASVYLL--LEYLKSSASKF 47
           ++L + NP   N+SVY +  +E+L   A+ F
Sbjct: 174 MTLALGNPYCFNSSVYKVFPVEHLLFIANAF 204


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 6.2
 Identities = 9/33 (27%), Positives = 14/33 (42%)
 Frame = -3

Query: 279 SSTHCSCLSLDYFVILQSMLFWFLHYSHYYTLQ 181
           S   C   S+ YF ++   L   + Y H  T +
Sbjct: 373 SDFDCDINSIQYFCLMARCLNTLIFYYHISTYE 405


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +3

Query: 240 QNNPN*DRNN 269
           +NNPN +RNN
Sbjct: 390 KNNPNDNRNN 399


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,104
Number of Sequences: 336
Number of extensions: 1829
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8963165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)