Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0945
         (575 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8EJT9 Cluster: Helicase; n=15; Bacteria|Rep: Helicase ...    33   6.4  
UniRef50_A7HXE9 Cluster: Thioesterase superfamily protein; n=1; ...    33   6.4  
UniRef50_Q4MVQ6 Cluster: Sensor protein; n=1; Bacillus cereus G9...    32   8.4  
UniRef50_Q03913 Cluster: Putative uncharacterized protein VPS61;...    32   8.4  

>UniRef50_Q8EJT9 Cluster: Helicase; n=15; Bacteria|Rep: Helicase -
           Shewanella oneidensis
          Length = 982

 Score = 32.7 bits (71), Expect = 6.4
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -1

Query: 134 FVHKYTRRIYRENNDVKSQILNDFPHSP 51
           F  K+   + + N  +K +ILNDFPH P
Sbjct: 600 FSQKFRALVGKTNQSIKDEILNDFPHLP 627


>UniRef50_A7HXE9 Cluster: Thioesterase superfamily protein; n=1;
           Parvibaculum lavamentivorans DS-1|Rep: Thioesterase
           superfamily protein - Parvibaculum lavamentivorans DS-1
          Length = 153

 Score = 32.7 bits (71), Expect = 6.4
 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = +1

Query: 427 SAQPFQRLAGTNRQTKIVKMLFWCMYRIYIHIHVV--KSGYFNITNRHSN 570
           SA+P + L GT R TK  K + +C   +Y+    V   SG F +  RH +
Sbjct: 102 SARPGEWLEGTARVTKATKSVAFCEAELYVGGRAVLKASGVFKLMQRHKD 151


>UniRef50_Q4MVQ6 Cluster: Sensor protein; n=1; Bacillus cereus
           G9241|Rep: Sensor protein - Bacillus cereus G9241
          Length = 1018

 Score = 32.3 bits (70), Expect = 8.4
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -2

Query: 544 NNRFLLHEYEYIYGTYTKITFLQFLSVCLFRLI 446
           + RFL   YE+ + TY KI ++ F+   LF L+
Sbjct: 255 DERFLFSLYEFEFSTYMKIIYISFVGFALFILL 287


>UniRef50_Q03913 Cluster: Putative uncharacterized protein VPS61;
           n=1; Saccharomyces cerevisiae|Rep: Putative
           uncharacterized protein VPS61 - Saccharomyces cerevisiae
           (Baker's yeast)
          Length = 190

 Score = 32.3 bits (70), Expect = 8.4
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = -2

Query: 532 LLHEYEYIYGTYTKITFLQFLSVCLFRLISGTAGP 428
           +LH+YEYIY   T   F ++L VC F +I     P
Sbjct: 146 MLHQYEYIYLMLTS-GFCRYLGVCFFMIIQKYVTP 179


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 534,178,785
Number of Sequences: 1657284
Number of extensions: 9942593
Number of successful extensions: 22524
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21970
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22523
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39571085965
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)